RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 S4R3F8 94 aa6.97□□□□□ -1.29
RAB40C-202ENST00000509637 LINC00643Q86TS7 51 aa6.96□□□□□ -1.3
RAB40C-202ENST00000509637 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
RAB40C-202ENST00000509637 KLKP1Q107X0 134 aa6.94□□□□□ -1.3
RAB40C-202ENST00000509637 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
RAB40C-202ENST00000509637 C1orf64Q8NEQ6 169 aa6.93□□□□□ -1.3
RAB40C-202ENST00000509637 HIST1H4AP62805 103 aaKnown RBP6.91□□□□□ -1.3
RAB40C-202ENST00000509637 A0A087WVE0 104 aa6.9□□□□□ -1.3
RAB40C-202ENST00000509637 KRTAP2-3P0C7H8 128 aa6.88□□□□□ -1.31
RAB40C-202ENST00000509637 KRTAP2-4Q9BYR9 128 aa6.88□□□□□ -1.31
RAB40C-202ENST00000509637 K7ERU9 68 aa6.87□□□□□ -1.31
RAB40C-202ENST00000509637 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
RAB40C-202ENST00000509637 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
RAB40C-202ENST00000509637 SPRR2EP22531 72 aa6.76□□□□□ -1.33
RAB40C-202ENST00000509637 SPRR2BP35325 72 aa6.76□□□□□ -1.33
RAB40C-202ENST00000509637 SPRR2AP35326 72 aa6.76□□□□□ -1.33
RAB40C-202ENST00000509637 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
RAB40C-202ENST00000509637 MT1XP80297 61 aa6.74□□□□□ -1.33
RAB40C-202ENST00000509637 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
RAB40C-202ENST00000509637 UQCRQO14949 82 aa6.73□□□□□ -1.33
RAB40C-202ENST00000509637 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
RAB40C-202ENST00000509637 LCE1AQ5T7P2 110 aa6.7□□□□□ -1.34
RAB40C-202ENST00000509637 CYP4F30PQ9H0H9 118 aa6.7□□□□□ -1.34
RAB40C-202ENST00000509637 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
RAB40C-202ENST00000509637 ATOX1O00244 68 aa6.68□□□□□ -1.34
RAB40C-202ENST00000509637 SCGB1A1P11684 91 aa6.68□□□□□ -1.34
RAB40C-202ENST00000509637 LOC101927531A0A1B0GV80 90 aa6.66□□□□□ -1.34
RAB40C-202ENST00000509637 H0Y9P7 68 aa6.66□□□□□ -1.34
RAB40C-202ENST00000509637 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
RAB40C-202ENST00000509637 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
RAB40C-202ENST00000509637 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
RAB40C-202ENST00000509637 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
RAB40C-202ENST00000509637 MP68P56378 58 aa6.62□□□□□ -1.35
RAB40C-202ENST00000509637 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
RAB40C-202ENST00000509637 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
RAB40C-202ENST00000509637 H0YAA0 97 aa6.6□□□□□ -1.35
RAB40C-202ENST00000509637 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
RAB40C-202ENST00000509637 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
RAB40C-202ENST00000509637 H3BPC8 53 aa6.56□□□□□ -1.36
RAB40C-202ENST00000509637 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
RAB40C-202ENST00000509637 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
RAB40C-202ENST00000509637 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
RAB40C-202ENST00000509637 A8MUN3 132 aa6.52□□□□□ -1.37
RAB40C-202ENST00000509637 SPRR2DP22532 72 aa6.52□□□□□ -1.37
RAB40C-202ENST00000509637 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
RAB40C-202ENST00000509637 NDUFC1O43677 76 aa6.5□□□□□ -1.37
RAB40C-202ENST00000509637 P0C880 135 aa6.45□□□□□ -1.38
RAB40C-202ENST00000509637 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
RAB40C-202ENST00000509637 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
RAB40C-202ENST00000509637 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
RAB40C-202ENST00000509637 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
RAB40C-202ENST00000509637 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
RAB40C-202ENST00000509637 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
RAB40C-202ENST00000509637 C20orf197Q8N268 126 aa6.34□□□□□ -1.39
RAB40C-202ENST00000509637 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
RAB40C-202ENST00000509637 R4GN34 69 aa6.33□□□□□ -1.4
RAB40C-202ENST00000509637 M0QZ58 72 aa6.32□□□□□ -1.4
RAB40C-202ENST00000509637 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
RAB40C-202ENST00000509637 COX7CP15954 63 aa6.29□□□□□ -1.4
RAB40C-202ENST00000509637 ACYP2P14621 99 aa6.25□□□□□ -1.41
RAB40C-202ENST00000509637 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
RAB40C-202ENST00000509637 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
RAB40C-202ENST00000509637 ANAPC13Q9BS18 74 aa6.23□□□□□ -1.41
RAB40C-202ENST00000509637 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
RAB40C-202ENST00000509637 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
RAB40C-202ENST00000509637 H7BZZ5 65 aa6.12□□□□□ -1.43
RAB40C-202ENST00000509637 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
RAB40C-202ENST00000509637 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
RAB40C-202ENST00000509637 GPR98Q8WXG9 6306 aa6.1□□□□□ -1.43
RAB40C-202ENST00000509637 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
RAB40C-202ENST00000509637 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
RAB40C-202ENST00000509637 CCDC179H3BU77 68 aa6.06□□□□□ -1.44
RAB40C-202ENST00000509637 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
RAB40C-202ENST00000509637 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
RAB40C-202ENST00000509637 COA5Q86WW8 74 aa6.03□□□□□ -1.44
RAB40C-202ENST00000509637 MT1EP04732 61 aa5.97□□□□□ -1.45
RAB40C-202ENST00000509637 ATP5EP56381 51 aaPredicted RBP5.96□□□□□ -1.46
RAB40C-202ENST00000509637 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
RAB40C-202ENST00000509637 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
RAB40C-202ENST00000509637 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
RAB40C-202ENST00000509637 TMEM258P61165 79 aa5.89□□□□□ -1.47
RAB40C-202ENST00000509637 SEC61GP60059 68 aa5.88□□□□□ -1.47
RAB40C-202ENST00000509637 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
RAB40C-202ENST00000509637 MT4P47944 62 aa5.78□□□□□ -1.48
RAB40C-202ENST00000509637 PCP4P48539 62 aa5.78□□□□□ -1.48
RAB40C-202ENST00000509637 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
RAB40C-202ENST00000509637 A0A1B0GU69 56 aa5.75□□□□□ -1.49
RAB40C-202ENST00000509637 MT1GP13640 62 aa5.75□□□□□ -1.49
RAB40C-202ENST00000509637 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
RAB40C-202ENST00000509637 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
RAB40C-202ENST00000509637 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.49
RAB40C-202ENST00000509637 MT1MQ8N339 61 aa5.71□□□□□ -1.5
RAB40C-202ENST00000509637 A0A1B0GU33 70 aa5.7□□□□□ -1.5
RAB40C-202ENST00000509637 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
RAB40C-202ENST00000509637 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
RAB40C-202ENST00000509637 A0A0D9SG42 100 aa5.68□□□□□ -1.5
RAB40C-202ENST00000509637 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
RAB40C-202ENST00000509637 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
RAB40C-202ENST00000509637 KRTAP5-4Q6L8H1 288 aa5.66□□□□□ -1.5
RAB40C-202ENST00000509637 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms