RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
RNF4-212ENST00000509258 KMT2DO14686 5537 aa4.84□□□□□ -1.63
RNF4-212ENST00000509258 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
RNF4-212ENST00000509258 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
RNF4-212ENST00000509258 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
RNF4-212ENST00000509258 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
RNF4-212ENST00000509258 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
RNF4-212ENST00000509258 TRAV22A0A0B4J277 110 aa4.78□□□□□ -1.64
RNF4-212ENST00000509258 ACYP1P07311 99 aa4.75□□□□□ -1.65
RNF4-212ENST00000509258 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
RNF4-212ENST00000509258 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
RNF4-212ENST00000509258 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
RNF4-212ENST00000509258 FAM240AA0A1B0GVK7 77 aa4.73□□□□□ -1.65
RNF4-212ENST00000509258 H0Y9P7 68 aa4.72□□□□□ -1.65
RNF4-212ENST00000509258 NDUFC1O43677 76 aa4.71□□□□□ -1.66
RNF4-212ENST00000509258 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
RNF4-212ENST00000509258 UQCRQO14949 82 aa4.7□□□□□ -1.66
RNF4-212ENST00000509258 ATP5EP2Q5VTU8 51 aa4.7□□□□□ -1.66
RNF4-212ENST00000509258 H0YAA0 97 aa4.69□□□□□ -1.66
RNF4-212ENST00000509258 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
RNF4-212ENST00000509258 ATOX1O00244 68 aa4.67□□□□□ -1.66
RNF4-212ENST00000509258 A8MUN3 132 aa4.65□□□□□ -1.67
RNF4-212ENST00000509258 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
RNF4-212ENST00000509258 LINC00643Q86TS7 51 aa4.64□□□□□ -1.67
RNF4-212ENST00000509258 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
RNF4-212ENST00000509258 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
RNF4-212ENST00000509258 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
RNF4-212ENST00000509258 SPRR2EP22531 72 aa4.62□□□□□ -1.67
RNF4-212ENST00000509258 SPRR2BP35325 72 aa4.62□□□□□ -1.67
RNF4-212ENST00000509258 SPRR2AP35326 72 aa4.62□□□□□ -1.67
RNF4-212ENST00000509258 MT1XP80297 61 aa4.62□□□□□ -1.67
RNF4-212ENST00000509258 PLAC4Q8WY50 150 aa4.61□□□□□ -1.67
RNF4-212ENST00000509258 A0A1B0GV90 55 aa4.6□□□□□ -1.67
RNF4-212ENST00000509258 P0C880 135 aa4.58□□□□□ -1.68
RNF4-212ENST00000509258 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
RNF4-212ENST00000509258 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
RNF4-212ENST00000509258 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
RNF4-212ENST00000509258 R4GN34 69 aa4.56□□□□□ -1.68
RNF4-212ENST00000509258 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
RNF4-212ENST00000509258 MP68P56378 58 aa4.54□□□□□ -1.68
RNF4-212ENST00000509258 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
RNF4-212ENST00000509258 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
RNF4-212ENST00000509258 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
RNF4-212ENST00000509258 DMAC1Q96GE9 116 aa4.5□□□□□ -1.69
RNF4-212ENST00000509258 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
RNF4-212ENST00000509258 M0QZ58 72 aa4.48□□□□□ -1.69
RNF4-212ENST00000509258 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
RNF4-212ENST00000509258 H3BPC8 53 aa4.47□□□□□ -1.69
RNF4-212ENST00000509258 J3QR89 54 aa4.47□□□□□ -1.69
RNF4-212ENST00000509258 SPRR2DP22532 72 aa4.46□□□□□ -1.7
RNF4-212ENST00000509258 SCGB1A1P11684 91 aa4.43□□□□□ -1.7
RNF4-212ENST00000509258 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
RNF4-212ENST00000509258 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
RNF4-212ENST00000509258 MT-ATP8P03928 68 aa4.38□□□□□ -1.71
RNF4-212ENST00000509258 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
RNF4-212ENST00000509258 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
RNF4-212ENST00000509258 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
RNF4-212ENST00000509258 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
RNF4-212ENST00000509258 ACYP2P14621 99 aa4.32□□□□□ -1.72
RNF4-212ENST00000509258 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
RNF4-212ENST00000509258 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
RNF4-212ENST00000509258 K7ERU9 68 aa4.3□□□□□ -1.72
RNF4-212ENST00000509258 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
RNF4-212ENST00000509258 SNURFQ9Y675 71 aa4.29□□□□□ -1.72
RNF4-212ENST00000509258 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
RNF4-212ENST00000509258 CHKB-CPT1BH3BT56 60 aa4.27□□□□□ -1.73
RNF4-212ENST00000509258 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
RNF4-212ENST00000509258 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
RNF4-212ENST00000509258 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
RNF4-212ENST00000509258 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
RNF4-212ENST00000509258 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
RNF4-212ENST00000509258 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
RNF4-212ENST00000509258 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
RNF4-212ENST00000509258 COA5Q86WW8 74 aa4.11□□□□□ -1.75
RNF4-212ENST00000509258 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
RNF4-212ENST00000509258 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
RNF4-212ENST00000509258 MT1EP04732 61 aa4.08□□□□□ -1.76
RNF4-212ENST00000509258 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
RNF4-212ENST00000509258 A0A0D9SG42 100 aa4.06□□□□□ -1.76
RNF4-212ENST00000509258 SEC61GP60059 68 aa4.06□□□□□ -1.76
RNF4-212ENST00000509258 SPATA8Q6RVD6 105 aa4.06□□□□□ -1.76
RNF4-212ENST00000509258 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
RNF4-212ENST00000509258 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
RNF4-212ENST00000509258 SERP1Q9Y6X1 66 aa4.04□□□□□ -1.76
RNF4-212ENST00000509258 COX7CP15954 63 aa4.02□□□□□ -1.77
RNF4-212ENST00000509258 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
RNF4-212ENST00000509258 H7BZZ5 65 aa3.99□□□□□ -1.77
RNF4-212ENST00000509258 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
RNF4-212ENST00000509258 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
RNF4-212ENST00000509258 H3BS24 57 aa3.98□□□□□ -1.77
RNF4-212ENST00000509258 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
RNF4-212ENST00000509258 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
RNF4-212ENST00000509258 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
RNF4-212ENST00000509258 A0A1B0GU33 70 aa3.96□□□□□ -1.78
RNF4-212ENST00000509258 MT1GP13640 62 aa3.96□□□□□ -1.78
RNF4-212ENST00000509258 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
RNF4-212ENST00000509258 A8MU10 97 aa3.92□□□□□ -1.78
RNF4-212ENST00000509258 MT4P47944 62 aa3.92□□□□□ -1.78
RNF4-212ENST00000509258 MT1MQ8N339 61 aa3.89□□□□□ -1.79
RNF4-212ENST00000509258 MT1LQ93083 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms