RNA–Protein interactions for RNA: ENST00000509030.5

TNPO1-207, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-207ENST00000509030 LAMA3Q16787 3333 aa0.26□□□□□ -2.37
TNPO1-207ENST00000509030 SFTA3P0C7M3 94 aa0.26□□□□□ -2.37
TNPO1-207ENST00000509030 DYNC2H1Q8NCM8 4307 aaKnown RBP0.26□□□□□ -2.37
TNPO1-207ENST00000509030 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
TNPO1-207ENST00000509030 DCHS1Q96JQ0 3298 aa0.26□□□□□ -2.37
TNPO1-207ENST00000509030 BRCA2P51587 3418 aa0.26□□□□□ -2.37
TNPO1-207ENST00000509030 ASPMQ8IZT6 3477 aa0.26□□□□□ -2.37
TNPO1-207ENST00000509030 HUWE1Q7Z6Z7 4374 aaKnown RBP0.26□□□□□ -2.37
TNPO1-207ENST00000509030 MUC5ACP98088 5654 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 MYCBP2O75592 4640 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 DNAH14Q0VDD8 3507 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 USP34Q70CQ2 3546 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 PKD1P98161 4303 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 ETDCA0A1B0GVM5 59 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 SNRPGP15A8MWD9 76 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 M0R2T5 61 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 FCER1GP30273 86 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 DEFB114Q30KQ6 69 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 SMIM5Q71RC9 77 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 CSMD3Q7Z407 3707 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 LAMA1P25391 3075 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 LRP1BQ9NZR2 4599 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 CDH23Q9H251 3354 aa0.25□□□□□ -2.37
TNPO1-207ENST00000509030 ATMQ13315 3056 aa0.24□□□□□ -2.37
TNPO1-207ENST00000509030 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
TNPO1-207ENST00000509030 ACACAQ13085 2346 aa0.24□□□□□ -2.37
TNPO1-207ENST00000509030 PLECQ15149 4684 aaKnown RBP0.24□□□□□ -2.37
TNPO1-207ENST00000509030 DEFB135Q30KP9 77 aa0.24□□□□□ -2.37
TNPO1-207ENST00000509030 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
TNPO1-207ENST00000509030 SVEP1Q4LDE5 3571 aa0.24□□□□□ -2.37
TNPO1-207ENST00000509030 ADGRG4Q8IZF6 3080 aa0.24□□□□□ -2.37
TNPO1-207ENST00000509030 XIRP2A4UGR9 3374 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 DNAH1Q9P2D7 4330 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 MUC12Q9UKN1 5478 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 LINC01546A6NGU7 62 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 LINC01549A6NIU2 74 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 LYNX1G3V0Z9 82 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 PLNP26678 52 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 NCBP2-AS2Q69YL0 99 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 NMES1Q9C002 83 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 CMC2Q9NRP2 79 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 STARD9Q9P2P6 4700 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 CUBNO60494 3623 aa0.23□□□□□ -2.37
TNPO1-207ENST00000509030 CSMD2Q7Z408 3487 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 SMIM27A0A1W2PRY6 76 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 IGIPA6NJ69 53 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 H0YAA0 97 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 K7EMI3 77 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 IAPPP10997 89 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 SERF2P84101 59 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 TOMM5Q8N4H5 51 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 USH2AO75445 5202 aa0.22□□□□□ -2.37
TNPO1-207ENST00000509030 DSTQ03001 7570 aaKnown RBP0.22□□□□□ -2.37
TNPO1-207ENST00000509030 DNAH9Q9NYC9 4486 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 DYNC1H1Q14204 4646 aaKnown RBP0.21□□□□□ -2.38
TNPO1-207ENST00000509030 PRM1P04553 51 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 CRIP1P50238 77 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 LRP2P98164 4655 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 MINOS1Q5TGZ0 78 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 ABRACLQ9P1F3 81 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 VPS13DQ5THJ4 4388 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 TNXBP22105 4242 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 MUC17Q685J3 4493 aa0.21□□□□□ -2.38
TNPO1-207ENST00000509030 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
TNPO1-207ENST00000509030 SACSQ9NZJ4 4579 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 DNAH10Q8IVF4 4471 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 FLGP20930 4061 aaPredicted RBP0.2□□□□□ -2.38
TNPO1-207ENST00000509030 LRP1Q07954 4544 aaKnown RBP0.2□□□□□ -2.38
TNPO1-207ENST00000509030 SPRR2DP22532 72 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 SNRPGP62308 76 aaKnown RBP0.2□□□□□ -2.38
TNPO1-207ENST00000509030 PRLHP81277 87 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 KRTAP20-1Q3LI63 56 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 DNAH2Q9P225 4427 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 DNAH5Q8TE73 4624 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 FAT2Q9NYQ8 4349 aa0.2□□□□□ -2.38
TNPO1-207ENST00000509030 DNAH17Q9UFH2 4485 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 ANK3Q12955 4377 aaKnown RBP0.19□□□□□ -2.38
TNPO1-207ENST00000509030 H0YGX0 51 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 H3BNG1 76 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 M0R1W7 72 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 DEFB130BP0DP73 79 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 DEFB130AP0DP74 79 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 DEFB106AQ8N104 65 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 SMIM2Q9BVW6 85 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 TMEM167BQ9NRX6 74 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 HSPG2P98160 4391 aa0.19□□□□□ -2.38
TNPO1-207ENST00000509030 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
TNPO1-207ENST00000509030 APOBP04114 4563 aaKnown RBP0.18□□□□□ -2.38
TNPO1-207ENST00000509030 NDUFA1O15239 70 aa0.18□□□□□ -2.38
TNPO1-207ENST00000509030 C6orf48Q9UBA6 75 aa0.18□□□□□ -2.38
TNPO1-207ENST00000509030 FAT1Q14517 4588 aa0.18□□□□□ -2.38
TNPO1-207ENST00000509030 IGLV5-48A0A075B6I7 105 aa0.17□□□□□ -2.38
TNPO1-207ENST00000509030 LINC00308Q8TCZ7 52 aa0.17□□□□□ -2.38
TNPO1-207ENST00000509030 TIMM8BQ9Y5J9 83 aaPredicted RBP0.17□□□□□ -2.38
TNPO1-207ENST00000509030 SPRR2BP35325 72 aa0.16□□□□□ -2.38
TNPO1-207ENST00000509030 RPS27P42677 84 aaKnown RBP0.16□□□□□ -2.38
TNPO1-207ENST00000509030 DEFB131AP59861 70 aa0.16□□□□□ -2.38
TNPO1-207ENST00000509030 RPS27LQ71UM5 84 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms