RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
TRIM41-204ENST00000508930 PKD1P98161 4303 aa7.3□□□□□ -1.24
TRIM41-204ENST00000508930 LUZP6Q538Z0 58 aa7.27□□□□□ -1.25
TRIM41-204ENST00000508930 HYDINQ4G0P3 5121 aa7.27□□□□□ -1.25
TRIM41-204ENST00000508930 SACSQ9NZJ4 4579 aa7.26□□□□□ -1.25
TRIM41-204ENST00000508930 KMT2CQ8NEZ4 4911 aaKnown RBP7.26□□□□□ -1.25
TRIM41-204ENST00000508930 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
TRIM41-204ENST00000508930 FAT1Q14517 4588 aa7.25□□□□□ -1.25
TRIM41-204ENST00000508930 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
TRIM41-204ENST00000508930 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
TRIM41-204ENST00000508930 KRTAP10-4P60372 401 aaPredicted RBP7.19□□□□□ -1.26
TRIM41-204ENST00000508930 DYNC1H1Q14204 4646 aaKnown RBP7.18□□□□□ -1.26
TRIM41-204ENST00000508930 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
TRIM41-204ENST00000508930 XP32Q5T750 250 aa7.16□□□□□ -1.26
TRIM41-204ENST00000508930 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
TRIM41-204ENST00000508930 PKHD1P08F94 4074 aa7.15□□□□□ -1.26
TRIM41-204ENST00000508930 M0QZ58 72 aa7.09□□□□□ -1.27
TRIM41-204ENST00000508930 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
TRIM41-204ENST00000508930 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
TRIM41-204ENST00000508930 Q5VSD8 79 aa7.02□□□□□ -1.29
TRIM41-204ENST00000508930 APOBP04114 4563 aaKnown RBP7.01□□□□□ -1.29
TRIM41-204ENST00000508930 RYR3Q15413 4870 aa7□□□□□ -1.29
TRIM41-204ENST00000508930 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
TRIM41-204ENST00000508930 MYCBP2O75592 4640 aa6.98□□□□□ -1.29
TRIM41-204ENST00000508930 R4GN34 69 aa6.98□□□□□ -1.29
TRIM41-204ENST00000508930 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.3
TRIM41-204ENST00000508930 RYR2Q92736 4967 aa6.94□□□□□ -1.3
TRIM41-204ENST00000508930 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
TRIM41-204ENST00000508930 HSPG2P98160 4391 aa6.92□□□□□ -1.3
TRIM41-204ENST00000508930 EPPK1P58107 5090 aaKnown RBP6.88□□□□□ -1.31
TRIM41-204ENST00000508930 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
TRIM41-204ENST00000508930 J3QL48 77 aa6.82□□□□□ -1.32
TRIM41-204ENST00000508930 KRTAP4-5Q9BYR2 181 aa6.8□□□□□ -1.32
TRIM41-204ENST00000508930 RYR1P21817 5038 aa6.77□□□□□ -1.33
TRIM41-204ENST00000508930 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
TRIM41-204ENST00000508930 TNXBP22105 4242 aa6.75□□□□□ -1.33
TRIM41-204ENST00000508930 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
TRIM41-204ENST00000508930 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.33
TRIM41-204ENST00000508930 MT1HL1P0DM35 61 aa6.71□□□□□ -1.34
TRIM41-204ENST00000508930 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.35
TRIM41-204ENST00000508930 LRP2P98164 4655 aa6.65□□□□□ -1.35
TRIM41-204ENST00000508930 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
TRIM41-204ENST00000508930 LPAP08519 4548 aa6.59□□□□□ -1.35
TRIM41-204ENST00000508930 HERC2O95714 4834 aa6.51□□□□□ -1.37
TRIM41-204ENST00000508930 ABCA13Q86UQ4 5058 aa6.49□□□□□ -1.37
TRIM41-204ENST00000508930 TNP1P09430 55 aa6.43□□□□□ -1.38
TRIM41-204ENST00000508930 BIRC6Q9NR09 4857 aa6.42□□□□□ -1.38
TRIM41-204ENST00000508930 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
TRIM41-204ENST00000508930 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
TRIM41-204ENST00000508930 HERC1Q15751 4861 aa6.34□□□□□ -1.4
TRIM41-204ENST00000508930 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
TRIM41-204ENST00000508930 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
TRIM41-204ENST00000508930 MUC2Q02817 5179 aa6.15□□□□□ -1.42
TRIM41-204ENST00000508930 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.43
TRIM41-204ENST00000508930 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
TRIM41-204ENST00000508930 M0R2T5 61 aa6.11□□□□□ -1.43
TRIM41-204ENST00000508930 UBR4Q5T4S7 5183 aa6.09□□□□□ -1.43
TRIM41-204ENST00000508930 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.44
TRIM41-204ENST00000508930 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
TRIM41-204ENST00000508930 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
TRIM41-204ENST00000508930 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
TRIM41-204ENST00000508930 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
TRIM41-204ENST00000508930 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
TRIM41-204ENST00000508930 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
TRIM41-204ENST00000508930 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
TRIM41-204ENST00000508930 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
TRIM41-204ENST00000508930 INE1O15225 51 aa5.81□□□□□ -1.48
TRIM41-204ENST00000508930 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
TRIM41-204ENST00000508930 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
TRIM41-204ENST00000508930 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
TRIM41-204ENST00000508930 LCE2CQ5TA81 110 aa5.68□□□□□ -1.5
TRIM41-204ENST00000508930 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
TRIM41-204ENST00000508930 MT1FP04733 61 aa5.63□□□□□ -1.51
TRIM41-204ENST00000508930 MT2AP02795 61 aa5.62□□□□□ -1.51
TRIM41-204ENST00000508930 MT1HP80294 61 aa5.59□□□□□ -1.51
TRIM41-204ENST00000508930 LCE2DQ5TA82 110 aaPredicted RBP5.52□□□□□ -1.53
TRIM41-204ENST00000508930 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
TRIM41-204ENST00000508930 MT1XP80297 61 aa5.51□□□□□ -1.53
TRIM41-204ENST00000508930 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
TRIM41-204ENST00000508930 MT1BP07438 61 aa5.47□□□□□ -1.53
TRIM41-204ENST00000508930 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.53
TRIM41-204ENST00000508930 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
TRIM41-204ENST00000508930 USH2AO75445 5202 aa5.31□□□□□ -1.56
TRIM41-204ENST00000508930 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
TRIM41-204ENST00000508930 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
TRIM41-204ENST00000508930 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
TRIM41-204ENST00000508930 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.6
TRIM41-204ENST00000508930 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.6
TRIM41-204ENST00000508930 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
TRIM41-204ENST00000508930 KMT2DO14686 5537 aa5.03□□□□□ -1.6
TRIM41-204ENST00000508930 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
TRIM41-204ENST00000508930 LCE2AQ5TA79 106 aaPredicted RBP5.01□□□□□ -1.61
TRIM41-204ENST00000508930 LCE2BO14633 110 aa5□□□□□ -1.61
TRIM41-204ENST00000508930 KRTAP2-3P0C7H8 128 aa4.96□□□□□ -1.62
TRIM41-204ENST00000508930 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
TRIM41-204ENST00000508930 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
TRIM41-204ENST00000508930 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
TRIM41-204ENST00000508930 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
TRIM41-204ENST00000508930 MT1LQ93083 61 aa4.81□□□□□ -1.64
TRIM41-204ENST00000508930 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms