RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
ATP2C1-214ENST00000508532 KRTAP12-2P59991 146 aa7.41□□□□□ -1.22
ATP2C1-214ENST00000508532 LUZP6Q538Z0 58 aa7.41□□□□□ -1.22
ATP2C1-214ENST00000508532 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
ATP2C1-214ENST00000508532 KRTAP10-8P60410 259 aa7.4□□□□□ -1.22
ATP2C1-214ENST00000508532 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
ATP2C1-214ENST00000508532 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
ATP2C1-214ENST00000508532 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
ATP2C1-214ENST00000508532 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
ATP2C1-214ENST00000508532 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
ATP2C1-214ENST00000508532 A0A1B0GVY2 172 aa7.25□□□□□ -1.25
ATP2C1-214ENST00000508532 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
ATP2C1-214ENST00000508532 FAT1Q14517 4588 aa7.22□□□□□ -1.25
ATP2C1-214ENST00000508532 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.25
ATP2C1-214ENST00000508532 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
ATP2C1-214ENST00000508532 KRTAP10-4P60372 401 aaPredicted RBP7.17□□□□□ -1.26
ATP2C1-214ENST00000508532 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
ATP2C1-214ENST00000508532 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
ATP2C1-214ENST00000508532 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.27
ATP2C1-214ENST00000508532 PKHD1P08F94 4074 aa7.08□□□□□ -1.28
ATP2C1-214ENST00000508532 FAT2Q9NYQ8 4349 aa7.04□□□□□ -1.28
ATP2C1-214ENST00000508532 MYCBP2O75592 4640 aa7.03□□□□□ -1.28
ATP2C1-214ENST00000508532 PKD1P98161 4303 aa7.01□□□□□ -1.29
ATP2C1-214ENST00000508532 SACSQ9NZJ4 4579 aa6.98□□□□□ -1.29
ATP2C1-214ENST00000508532 PP632Q6XCG6 107 aa6.9□□□□□ -1.31
ATP2C1-214ENST00000508532 TNP1P09430 55 aa6.88□□□□□ -1.31
ATP2C1-214ENST00000508532 MT1HL1P0DM35 61 aa6.87□□□□□ -1.31
ATP2C1-214ENST00000508532 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-214ENST00000508532 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
ATP2C1-214ENST00000508532 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
ATP2C1-214ENST00000508532 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
ATP2C1-214ENST00000508532 RYR2Q92736 4967 aa6.76□□□□□ -1.33
ATP2C1-214ENST00000508532 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
ATP2C1-214ENST00000508532 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
ATP2C1-214ENST00000508532 RYR3Q15413 4870 aa6.65□□□□□ -1.35
ATP2C1-214ENST00000508532 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
ATP2C1-214ENST00000508532 RYR1P21817 5038 aa6.62□□□□□ -1.35
ATP2C1-214ENST00000508532 HSPG2P98160 4391 aa6.6□□□□□ -1.35
ATP2C1-214ENST00000508532 LRP2P98164 4655 aa6.58□□□□□ -1.36
ATP2C1-214ENST00000508532 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
ATP2C1-214ENST00000508532 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
ATP2C1-214ENST00000508532 TNXBP22105 4242 aa6.45□□□□□ -1.38
ATP2C1-214ENST00000508532 KRTAP4-1Q9BYQ7 146 aa6.45□□□□□ -1.38
ATP2C1-214ENST00000508532 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
ATP2C1-214ENST00000508532 LPAP08519 4548 aa6.36□□□□□ -1.39
ATP2C1-214ENST00000508532 EPPK1P58107 5090 aaKnown RBP6.36□□□□□ -1.39
ATP2C1-214ENST00000508532 ABCA13Q86UQ4 5058 aa6.25□□□□□ -1.41
ATP2C1-214ENST00000508532 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
ATP2C1-214ENST00000508532 HERC2O95714 4834 aa6.17□□□□□ -1.42
ATP2C1-214ENST00000508532 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
ATP2C1-214ENST00000508532 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
ATP2C1-214ENST00000508532 MUC2Q02817 5179 aa6.01□□□□□ -1.45
ATP2C1-214ENST00000508532 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
ATP2C1-214ENST00000508532 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
ATP2C1-214ENST00000508532 INE1O15225 51 aa5.92□□□□□ -1.46
ATP2C1-214ENST00000508532 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
ATP2C1-214ENST00000508532 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
ATP2C1-214ENST00000508532 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
ATP2C1-214ENST00000508532 HERC1Q15751 4861 aa5.86□□□□□ -1.47
ATP2C1-214ENST00000508532 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
ATP2C1-214ENST00000508532 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
ATP2C1-214ENST00000508532 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
ATP2C1-214ENST00000508532 MT1FP04733 61 aa5.79□□□□□ -1.48
ATP2C1-214ENST00000508532 MT2AP02795 61 aa5.79□□□□□ -1.48
ATP2C1-214ENST00000508532 MT1HP80294 61 aa5.78□□□□□ -1.48
ATP2C1-214ENST00000508532 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
ATP2C1-214ENST00000508532 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
ATP2C1-214ENST00000508532 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
ATP2C1-214ENST00000508532 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.5
ATP2C1-214ENST00000508532 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
ATP2C1-214ENST00000508532 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
ATP2C1-214ENST00000508532 HMCN2Q8NDA2 5059 aa5.62□□□□□ -1.51
ATP2C1-214ENST00000508532 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
ATP2C1-214ENST00000508532 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
ATP2C1-214ENST00000508532 MT1XP80297 61 aa5.57□□□□□ -1.52
ATP2C1-214ENST00000508532 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
ATP2C1-214ENST00000508532 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
ATP2C1-214ENST00000508532 MT1BP07438 61 aa5.52□□□□□ -1.53
ATP2C1-214ENST00000508532 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
ATP2C1-214ENST00000508532 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
ATP2C1-214ENST00000508532 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
ATP2C1-214ENST00000508532 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
ATP2C1-214ENST00000508532 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
ATP2C1-214ENST00000508532 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
ATP2C1-214ENST00000508532 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
ATP2C1-214ENST00000508532 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
ATP2C1-214ENST00000508532 LCE2BO14633 110 aa5.09□□□□□ -1.59
ATP2C1-214ENST00000508532 USH2AO75445 5202 aa5.08□□□□□ -1.6
ATP2C1-214ENST00000508532 KMT2DO14686 5537 aa5.06□□□□□ -1.6
ATP2C1-214ENST00000508532 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
ATP2C1-214ENST00000508532 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
ATP2C1-214ENST00000508532 SPRR2FQ96RM1 72 aa4.97□□□□□ -1.61
ATP2C1-214ENST00000508532 MT1GP13640 62 aa4.89□□□□□ -1.63
ATP2C1-214ENST00000508532 MT1LQ93083 61 aa4.89□□□□□ -1.63
ATP2C1-214ENST00000508532 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
ATP2C1-214ENST00000508532 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
ATP2C1-214ENST00000508532 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
ATP2C1-214ENST00000508532 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
ATP2C1-214ENST00000508532 MT1EP04732 61 aa4.84□□□□□ -1.64
ATP2C1-214ENST00000508532 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms