RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 FAM236DA0A1B0GTK5 79 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 A8MWP4 228 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 BPY2O14599 106 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 FAM236CP0DP71 79 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 HRES1P13985 223 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 PDE6GP18545 87 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 C4orf26Q17RF5 130 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 ZCCHC13Q8WW36 166 aaKnown RBP2.26□□□□□ -2.05
NUP54-206ENST00000508465 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 SPCS1Q9Y6A9 102 aa2.26□□□□□ -2.05
NUP54-206ENST00000508465 H3BT86 120 aa2.25□□□□□ -2.05
NUP54-206ENST00000508465 SPINK7P58062 85 aa2.25□□□□□ -2.05
NUP54-206ENST00000508465 PRR15Q8IV56 129 aa2.25□□□□□ -2.05
NUP54-206ENST00000508465 A0A1B0GW54 56 aa2.24□□□□□ -2.05
NUP54-206ENST00000508465 COL5A1-AS1Q5SY13 56 aa2.24□□□□□ -2.05
NUP54-206ENST00000508465 Q8N9L7 120 aa2.24□□□□□ -2.05
NUP54-206ENST00000508465 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
NUP54-206ENST00000508465 MMP24-AS1A0A0U1RRL7 71 aa2.23□□□□□ -2.05
NUP54-206ENST00000508465 K7EQZ3 153 aa2.23□□□□□ -2.05
NUP54-206ENST00000508465 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
NUP54-206ENST00000508465 hDV103S1A0JD37 113 aa2.22□□□□□ -2.05
NUP54-206ENST00000508465 MP68P56378 58 aa2.22□□□□□ -2.05
NUP54-206ENST00000508465 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
NUP54-206ENST00000508465 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
NUP54-206ENST00000508465 MRPL34Q9BQ48 92 aaKnown RBP2.22□□□□□ -2.05
NUP54-206ENST00000508465 K7EP34 96 aa2.21□□□□□ -2.06
NUP54-206ENST00000508465 Q5W150 140 aa2.21□□□□□ -2.06
NUP54-206ENST00000508465 WFDC13Q8IUB5 93 aa2.21□□□□□ -2.06
NUP54-206ENST00000508465 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
NUP54-206ENST00000508465 LINC00846Q9NV44 126 aa2.21□□□□□ -2.06
NUP54-206ENST00000508465 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
NUP54-206ENST00000508465 MT2AP02795 61 aa2.2□□□□□ -2.06
NUP54-206ENST00000508465 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
NUP54-206ENST00000508465 HCG22E2RYF7 251 aa2.19□□□□□ -2.06
NUP54-206ENST00000508465 MT1FP04733 61 aa2.19□□□□□ -2.06
NUP54-206ENST00000508465 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
NUP54-206ENST00000508465 ETDBQ3ZM63 59 aa2.18□□□□□ -2.06
NUP54-206ENST00000508465 GTF2H5Q6ZYL4 71 aa2.18□□□□□ -2.06
NUP54-206ENST00000508465 UBL5Q9BZL1 73 aa2.18□□□□□ -2.06
NUP54-206ENST00000508465 F8W1H4 67 aa2.17□□□□□ -2.06
NUP54-206ENST00000508465 USH2AO75445 5202 aa2.16□□□□□ -2.06
NUP54-206ENST00000508465 K7ERS5 55 aa2.16□□□□□ -2.06
NUP54-206ENST00000508465 H1FX-AS1Q4G0G2 97 aa2.16□□□□□ -2.06
NUP54-206ENST00000508465 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
NUP54-206ENST00000508465 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
NUP54-206ENST00000508465 A6NED7 52 aa2.12□□□□□ -2.07
NUP54-206ENST00000508465 SPANXA2-OT1Q8N9U9 137 aa2.11□□□□□ -2.07
NUP54-206ENST00000508465 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
NUP54-206ENST00000508465 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
NUP54-206ENST00000508465 A0A1B0GV90 55 aa2.1□□□□□ -2.07
NUP54-206ENST00000508465 HIST1H4AP62805 103 aaKnown RBP2.1□□□□□ -2.07
NUP54-206ENST00000508465 TP53AIP1Q9HCN2 124 aa2.1□□□□□ -2.07
NUP54-206ENST00000508465 A0A087WVE0 104 aa2.09□□□□□ -2.07
NUP54-206ENST00000508465 ACYP1P07311 99 aa2.09□□□□□ -2.07
NUP54-206ENST00000508465 PMAIP1Q13794 54 aa2.09□□□□□ -2.07
NUP54-206ENST00000508465 CYP4F30PQ9H0H9 118 aa2.09□□□□□ -2.07
NUP54-206ENST00000508465 LCA10Q71F78 164 aa2.08□□□□□ -2.08
NUP54-206ENST00000508465 S4R3F8 94 aa2.08□□□□□ -2.08
NUP54-206ENST00000508465 CSAG1Q6PB30 78 aa2.07□□□□□ -2.08
NUP54-206ENST00000508465 TRAV22A0A0B4J277 110 aa2.06□□□□□ -2.08
NUP54-206ENST00000508465 FAM236AA0A1B0GUQ0 79 aa2.06□□□□□ -2.08
NUP54-206ENST00000508465 FAM236BA0A1B0GV22 79 aa2.06□□□□□ -2.08
NUP54-206ENST00000508465 H0Y9P7 68 aa2.06□□□□□ -2.08
NUP54-206ENST00000508465 ADM2Q7Z4H4 148 aa2.06□□□□□ -2.08
NUP54-206ENST00000508465 LINC00643Q86TS7 51 aa2.06□□□□□ -2.08
NUP54-206ENST00000508465 UQCRQO14949 82 aa2.05□□□□□ -2.08
NUP54-206ENST00000508465 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
NUP54-206ENST00000508465 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
NUP54-206ENST00000508465 KLKP1Q107X0 134 aa2.04□□□□□ -2.08
NUP54-206ENST00000508465 ATP5EP2Q5VTU8 51 aa2.04□□□□□ -2.08
NUP54-206ENST00000508465 LINC00208Q96KT6 92 aa2.04□□□□□ -2.08
NUP54-206ENST00000508465 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
NUP54-206ENST00000508465 ATOX1O00244 68 aa2.02□□□□□ -2.09
NUP54-206ENST00000508465 MT1BP07438 61 aa2.01□□□□□ -2.09
NUP54-206ENST00000508465 NDUFC1O43677 76 aa2□□□□□ -2.09
NUP54-206ENST00000508465 SCGB1A1P11684 91 aa2□□□□□ -2.09
NUP54-206ENST00000508465 Q5VV11 94 aa2□□□□□ -2.09
NUP54-206ENST00000508465 SPRR2GQ9BYE4 73 aa2□□□□□ -2.09
NUP54-206ENST00000508465 A8MUN3 132 aa1.99□□□□□ -2.09
NUP54-206ENST00000508465 J3QR89 54 aa1.99□□□□□ -2.09
NUP54-206ENST00000508465 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
NUP54-206ENST00000508465 IMUPQ9GZP8 106 aa1.98□□□□□ -2.09
NUP54-206ENST00000508465 A6NN06 94 aa1.97□□□□□ -2.09
NUP54-206ENST00000508465 MT-ATP8P03928 68 aa1.97□□□□□ -2.09
NUP54-206ENST00000508465 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
NUP54-206ENST00000508465 KRTAP25-1Q3LHN0 102 aa1.96□□□□□ -2.1
NUP54-206ENST00000508465 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
NUP54-206ENST00000508465 P0C880 135 aa1.95□□□□□ -2.1
NUP54-206ENST00000508465 SMIM20Q8N5G0 67 aa1.95□□□□□ -2.1
NUP54-206ENST00000508465 CRIPTQ9P021 101 aa1.95□□□□□ -2.1
NUP54-206ENST00000508465 R4GN34 69 aa1.95□□□□□ -2.1
NUP54-206ENST00000508465 H3BPC8 53 aa1.94□□□□□ -2.1
NUP54-206ENST00000508465 KRTAP6-3Q3LI67 103 aa1.94□□□□□ -2.1
NUP54-206ENST00000508465 TRAV7A0A075B6U4 112 aa1.93□□□□□ -2.1
NUP54-206ENST00000508465 A0A1B0GU33 70 aa1.93□□□□□ -2.1
NUP54-206ENST00000508465 H0YAA0 97 aa1.93□□□□□ -2.1
NUP54-206ENST00000508465 K7ERU9 68 aa1.93□□□□□ -2.1
NUP54-206ENST00000508465 DMAC1Q96GE9 116 aa1.93□□□□□ -2.1
NUP54-206ENST00000508465 SNURFQ9Y675 71 aa1.92□□□□□ -2.1
NUP54-206ENST00000508465 ACYP2P14621 99 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms