RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 OCR1Q9BZK8 76 aa9.11□□□□□ -0.95
SFXN1-209ENST00000508290 LINC00208Q96KT6 92 aa9.09□□□□□ -0.95
SFXN1-209ENST00000508290 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
SFXN1-209ENST00000508290 H3BPC8 53 aa9.05□□□□□ -0.96
SFXN1-209ENST00000508290 NDUFC1O43677 76 aa9.04□□□□□ -0.96
SFXN1-209ENST00000508290 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
SFXN1-209ENST00000508290 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
SFXN1-209ENST00000508290 SCGB1A1P11684 91 aa9.01□□□□□ -0.97
SFXN1-209ENST00000508290 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
SFXN1-209ENST00000508290 IMUPQ9GZP8 106 aa9.01□□□□□ -0.97
SFXN1-209ENST00000508290 CRIPTQ9P021 101 aa9□□□□□ -0.97
SFXN1-209ENST00000508290 H0YAA0 97 aa8.97□□□□□ -0.97
SFXN1-209ENST00000508290 Q5VV11 94 aa8.94□□□□□ -0.98
SFXN1-209ENST00000508290 K7ERU9 68 aa8.93□□□□□ -0.98
SFXN1-209ENST00000508290 KRTAP19-8Q3LI54 63 aa8.92□□□□□ -0.98
SFXN1-209ENST00000508290 MACF1Q9UPN3 7388 aaKnown RBP8.89□□□□□ -0.99
SFXN1-209ENST00000508290 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
SFXN1-209ENST00000508290 MT1BP07438 61 aa8.85□□□□□ -0.99
SFXN1-209ENST00000508290 DMAC1Q96GE9 116 aa8.83□□□□□ -1
SFXN1-209ENST00000508290 MT-ATP8P03928 68 aa8.79□□□□□ -1
SFXN1-209ENST00000508290 A6NN06 94 aa8.78□□□□□ -1
SFXN1-209ENST00000508290 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
SFXN1-209ENST00000508290 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
SFXN1-209ENST00000508290 SYNE2Q8WXH0 6885 aaKnown RBP8.75□□□□□ -1.01
SFXN1-209ENST00000508290 C20orf197Q8N268 126 aa8.73□□□□□ -1.01
SFXN1-209ENST00000508290 KRTAP10-5P60370 271 aa8.68□□□□□ -1.02
SFXN1-209ENST00000508290 ACYP2P14621 99 aa8.66□□□□□ -1.02
SFXN1-209ENST00000508290 KRTAP6-3Q3LI67 103 aa8.64□□□□□ -1.03
SFXN1-209ENST00000508290 SPTSSBQ8NFR3 76 aa8.61□□□□□ -1.03
SFXN1-209ENST00000508290 R4GN34 69 aa8.6□□□□□ -1.03
SFXN1-209ENST00000508290 P0C880 135 aa8.54□□□□□ -1.04
SFXN1-209ENST00000508290 SERP2Q8N6R1 65 aa8.51□□□□□ -1.05
SFXN1-209ENST00000508290 SPANXA2-OT1Q8N9U9 137 aa8.5□□□□□ -1.05
SFXN1-209ENST00000508290 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
SFXN1-209ENST00000508290 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
SFXN1-209ENST00000508290 CHKB-CPT1BH3BT56 60 aa8.49□□□□□ -1.05
SFXN1-209ENST00000508290 M0QZ58 72 aa8.49□□□□□ -1.05
SFXN1-209ENST00000508290 SNURFQ9Y675 71 aa8.49□□□□□ -1.05
SFXN1-209ENST00000508290 MT1XP80297 61 aa8.33□□□□□ -1.08
SFXN1-209ENST00000508290 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
SFXN1-209ENST00000508290 KRTAP5-9P26371 169 aa8.29□□□□□ -1.08
SFXN1-209ENST00000508290 COX7CP15954 63 aa8.26□□□□□ -1.09
SFXN1-209ENST00000508290 NEBP20929 6669 aa8.23□□□□□ -1.09
SFXN1-209ENST00000508290 KRTAP12-2P59991 146 aa8.21□□□□□ -1.1
SFXN1-209ENST00000508290 MUC12Q9UKN1 5478 aa8.19□□□□□ -1.1
SFXN1-209ENST00000508290 COA5Q86WW8 74 aa8.18□□□□□ -1.1
SFXN1-209ENST00000508290 SEC61GP60059 68 aa8.1□□□□□ -1.11
SFXN1-209ENST00000508290 KMT2DO14686 5537 aa8.09□□□□□ -1.11
SFXN1-209ENST00000508290 H7BZZ5 65 aa8.09□□□□□ -1.11
SFXN1-209ENST00000508290 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
SFXN1-209ENST00000508290 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
SFXN1-209ENST00000508290 KRTAP20-1Q3LI63 56 aa8.02□□□□□ -1.13
SFXN1-209ENST00000508290 SPRR2FQ96RM1 72 aa8.02□□□□□ -1.13
SFXN1-209ENST00000508290 ANAPC13Q9BS18 74 aa8□□□□□ -1.13
SFXN1-209ENST00000508290 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
SFXN1-209ENST00000508290 MDN1Q9NU22 5596 aa7.98□□□□□ -1.13
SFXN1-209ENST00000508290 CYSTM1Q9H1C7 97 aa7.97□□□□□ -1.13
SFXN1-209ENST00000508290 KRTAP10-12P60413 245 aa7.96□□□□□ -1.14
SFXN1-209ENST00000508290 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
SFXN1-209ENST00000508290 CAMK2N1Q7Z7J9 78 aa7.92□□□□□ -1.14
SFXN1-209ENST00000508290 A0A1B0GU33 70 aa7.88□□□□□ -1.15
SFXN1-209ENST00000508290 SPRR2EP22531 72 aa7.88□□□□□ -1.15
SFXN1-209ENST00000508290 SPRR2BP35325 72 aa7.88□□□□□ -1.15
SFXN1-209ENST00000508290 SPRR2AP35326 72 aa7.88□□□□□ -1.15
SFXN1-209ENST00000508290 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
SFXN1-209ENST00000508290 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
SFXN1-209ENST00000508290 ATP5EP56381 51 aaPredicted RBP7.83□□□□□ -1.16
SFXN1-209ENST00000508290 A0A1B0GU69 56 aa7.81□□□□□ -1.16
SFXN1-209ENST00000508290 A0A0D9SG42 100 aa7.79□□□□□ -1.16
SFXN1-209ENST00000508290 LCE1AQ5T7P2 110 aa7.79□□□□□ -1.16
SFXN1-209ENST00000508290 KRTAP2-3P0C7H8 128 aa7.78□□□□□ -1.16
SFXN1-209ENST00000508290 SPATA8Q6RVD6 105 aa7.78□□□□□ -1.16
SFXN1-209ENST00000508290 KRTAP2-4Q9BYR9 128 aa7.78□□□□□ -1.16
SFXN1-209ENST00000508290 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
SFXN1-209ENST00000508290 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
SFXN1-209ENST00000508290 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
SFXN1-209ENST00000508290 PRR15LQ9BU68 103 aa7.67□□□□□ -1.18
SFXN1-209ENST00000508290 KRTAP12-1P59990 96 aa7.66□□□□□ -1.18
SFXN1-209ENST00000508290 SPRR2DP22532 72 aa7.63□□□□□ -1.19
SFXN1-209ENST00000508290 TMEM258P61165 79 aa7.61□□□□□ -1.19
SFXN1-209ENST00000508290 KRTAP2-2Q9BYT5 123 aa7.54□□□□□ -1.2
SFXN1-209ENST00000508290 KRTAP2-1Q9BYU5 128 aa7.54□□□□□ -1.2
SFXN1-209ENST00000508290 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
SFXN1-209ENST00000508290 A8MU10 97 aa7.5□□□□□ -1.21
SFXN1-209ENST00000508290 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
SFXN1-209ENST00000508290 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
SFXN1-209ENST00000508290 MT1EP04732 61 aa7.4□□□□□ -1.22
SFXN1-209ENST00000508290 UQCR11O14957 56 aa7.39□□□□□ -1.23
SFXN1-209ENST00000508290 TNP1P09430 55 aa7.36□□□□□ -1.23
SFXN1-209ENST00000508290 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
SFXN1-209ENST00000508290 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
SFXN1-209ENST00000508290 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
SFXN1-209ENST00000508290 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
SFXN1-209ENST00000508290 V9GYY9 64 aa7.25□□□□□ -1.25
SFXN1-209ENST00000508290 MT1GP13640 62 aa7.21□□□□□ -1.26
SFXN1-209ENST00000508290 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
SFXN1-209ENST00000508290 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
SFXN1-209ENST00000508290 LCE3AQ5TA76 89 aa7.17□□□□□ -1.26
SFXN1-209ENST00000508290 K7ERS5 55 aa7.13□□□□□ -1.27
SFXN1-209ENST00000508290 Q1T7F1 81 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms