RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085		Q5VV11	94 aa		6.14	□□□□□ -1.43
CDHR2-204	ENST00000508085	LINC00643	Q86TS7	51 aa		6.13	□□□□□ -1.43
CDHR2-204	ENST00000508085	SYNE2	Q8WXH0	6885 aa	Known RBP	6.13	□□□□□ -1.43
CDHR2-204	ENST00000508085	ATOX1	O00244	68 aa		6.12	□□□□□ -1.43
CDHR2-204	ENST00000508085		A0A1B0GV90	55 aa		6.1	□□□□□ -1.43
CDHR2-204	ENST00000508085	KRTAP6-3	Q3LI67	103 aa		6.1	□□□□□ -1.43
CDHR2-204	ENST00000508085		A6NN06	94 aa		6.08	□□□□□ -1.44
CDHR2-204	ENST00000508085	OCR1	Q9BZK8	76 aa		6.06	□□□□□ -1.44
CDHR2-204	ENST00000508085	LINC00208	Q96KT6	92 aa		6.05	□□□□□ -1.44
CDHR2-204	ENST00000508085	NDUFC1	O43677	76 aa		6.04	□□□□□ -1.44
CDHR2-204	ENST00000508085	KRTAP10-5	P60370	271 aa		6.04	□□□□□ -1.44
CDHR2-204	ENST00000508085	IMUP	Q9GZP8	106 aa		6.04	□□□□□ -1.44
CDHR2-204	ENST00000508085	CRIPT	Q9P021	101 aa		6.04	□□□□□ -1.44
CDHR2-204	ENST00000508085		A8MUN3	132 aa		6.02	□□□□□ -1.45
CDHR2-204	ENST00000508085		H0YAA0	97 aa		6.01	□□□□□ -1.45
CDHR2-204	ENST00000508085	MP68	P56378	58 aa		5.97	□□□□□ -1.45
CDHR2-204	ENST00000508085	ADM2	Q7Z4H4	148 aa		5.95	□□□□□ -1.46
CDHR2-204	ENST00000508085		H3BPC8	53 aa		5.91	□□□□□ -1.46
CDHR2-204	ENST00000508085		J3QR89	54 aa		5.91	□□□□□ -1.46
CDHR2-204	ENST00000508085	DMAC1	Q96GE9	116 aa		5.88	□□□□□ -1.47
CDHR2-204	ENST00000508085		P0C880	135 aa		5.85	□□□□□ -1.47
CDHR2-204	ENST00000508085	SCGB1A1	P11684	91 aa		5.85	□□□□□ -1.47
CDHR2-204	ENST00000508085	KRTAP5-9	P26371	169 aa		5.83	□□□□□ -1.48
CDHR2-204	ENST00000508085	MUC12	Q9UKN1	5478 aa		5.82	□□□□□ -1.48
CDHR2-204	ENST00000508085	MT1X	P80297	61 aa		5.81	□□□□□ -1.48
CDHR2-204	ENST00000508085	KRTAP3-2	Q9BYR7	98 aa		5.81	□□□□□ -1.48
CDHR2-204	ENST00000508085	MT-ATP8	P03928	68 aa		5.78	□□□□□ -1.48
CDHR2-204	ENST00000508085		R4GN34	69 aa		5.78	□□□□□ -1.48
CDHR2-204	ENST00000508085	NEB	P20929	6669 aa		5.77	□□□□□ -1.49
CDHR2-204	ENST00000508085	C20orf197	Q8N268	126 aa		5.76	□□□□□ -1.49
CDHR2-204	ENST00000508085		M0QZ58	72 aa		5.75	□□□□□ -1.49
CDHR2-204	ENST00000508085	KMT2D	O14686	5537 aa		5.74	□□□□□ -1.49
CDHR2-204	ENST00000508085	PLAC4	Q8WY50	150 aa		5.74	□□□□□ -1.49
CDHR2-204	ENST00000508085	PRO2289	Q9P1D8	64 aa		5.74	□□□□□ -1.49
CDHR2-204	ENST00000508085	TRAV7	A0A075B6U4	112 aa		5.73	□□□□□ -1.49
CDHR2-204	ENST00000508085	SMIM20	Q8N5G0	67 aa		5.7	□□□□□ -1.5
CDHR2-204	ENST00000508085		K7ERU9	68 aa		5.69	□□□□□ -1.5
CDHR2-204	ENST00000508085	ACYP2	P14621	99 aa		5.69	□□□□□ -1.5
CDHR2-204	ENST00000508085	LINC01554	Q52M75	96 aa		5.66	□□□□□ -1.5
CDHR2-204	ENST00000508085	MDN1	Q9NU22	5596 aa		5.66	□□□□□ -1.5
CDHR2-204	ENST00000508085	KRTAP12-2	P59991	146 aa		5.65	□□□□□ -1.5
CDHR2-204	ENST00000508085	KRTAP20-1	Q3LI63	56 aa		5.65	□□□□□ -1.5
CDHR2-204	ENST00000508085	SPRR2F	Q96RM1	72 aa		5.63	□□□□□ -1.51
CDHR2-204	ENST00000508085	SNURF	Q9Y675	71 aa		5.63	□□□□□ -1.51
CDHR2-204	ENST00000508085	SPTSSB	Q8NFR3	76 aa		5.6	□□□□□ -1.51
CDHR2-204	ENST00000508085	KRTAP8-1	Q8IUC2	63 aa		5.59	□□□□□ -1.51
CDHR2-204	ENST00000508085	KRTAP4-8	A0A0G2JLE6	195 aa		5.57	□□□□□ -1.52
CDHR2-204	ENST00000508085	CHKB-CPT1B	H3BT56	60 aa		5.57	□□□□□ -1.52
CDHR2-204	ENST00000508085	KRTAP4-8	Q9BYQ9	185 aa		5.57	□□□□□ -1.52
CDHR2-204	ENST00000508085	SPRR2E	P22531	72 aa		5.55	□□□□□ -1.52
CDHR2-204	ENST00000508085	SPRR2B	P35325	72 aa		5.55	□□□□□ -1.52
CDHR2-204	ENST00000508085	SPRR2A	P35326	72 aa		5.55	□□□□□ -1.52
CDHR2-204	ENST00000508085	KRTAP10-7	P60409	375 aa	Predicted RBP	5.54	□□□□□ -1.52
CDHR2-204	ENST00000508085	SPANXA2-OT1	Q8N9U9	137 aa		5.54	□□□□□ -1.52
CDHR2-204	ENST00000508085	SERP2	Q8N6R1	65 aa		5.52	□□□□□ -1.53
CDHR2-204	ENST00000508085	KRTAP10-12	P60413	245 aa		5.51	□□□□□ -1.53
CDHR2-204	ENST00000508085	LCE1A	Q5T7P2	110 aa		5.5	□□□□□ -1.53
CDHR2-204	ENST00000508085	KRTAP2-3	P0C7H8	128 aa		5.49	□□□□□ -1.53
CDHR2-204	ENST00000508085	KRTAP2-4	Q9BYR9	128 aa		5.49	□□□□□ -1.53
CDHR2-204	ENST00000508085	KRTAP13-4	Q3LI77	160 aa		5.48	□□□□□ -1.53
CDHR2-204	ENST00000508085	COA5	Q86WW8	74 aa		5.41	□□□□□ -1.54
CDHR2-204	ENST00000508085	SPRR2D	P22532	72 aa		5.37	□□□□□ -1.55
CDHR2-204	ENST00000508085	COX7C	P15954	63 aa		5.33	□□□□□ -1.56
CDHR2-204	ENST00000508085	CYSTM1	Q9H1C7	97 aa		5.32	□□□□□ -1.56
CDHR2-204	ENST00000508085	KRTAP2-2	Q9BYT5	123 aa		5.31	□□□□□ -1.56
CDHR2-204	ENST00000508085	KRTAP2-1	Q9BYU5	128 aa		5.31	□□□□□ -1.56
CDHR2-204	ENST00000508085	CAMK2N1	Q7Z7J9	78 aa		5.3	□□□□□ -1.56
CDHR2-204	ENST00000508085		H7BZZ5	65 aa		5.28	□□□□□ -1.56
CDHR2-204	ENST00000508085		A0A0D9SG42	100 aa		5.26	□□□□□ -1.57
CDHR2-204	ENST00000508085	SPATA8	Q6RVD6	105 aa		5.25	□□□□□ -1.57
CDHR2-204	ENST00000508085	SERP1	Q9Y6X1	66 aa		5.25	□□□□□ -1.57
CDHR2-204	ENST00000508085	SEC61G	P60059	68 aa		5.24	□□□□□ -1.57
CDHR2-204	ENST00000508085	LCE3B	Q5TA77	95 aa		5.23	□□□□□ -1.57
CDHR2-204	ENST00000508085		A0A1B0GU33	70 aa		5.21	□□□□□ -1.58
CDHR2-204	ENST00000508085	KRTAP19-7	Q3SYF9	63 aa		5.2	□□□□□ -1.58
CDHR2-204	ENST00000508085	KRTAP12-1	P59990	96 aa		5.18	□□□□□ -1.58
CDHR2-204	ENST00000508085	SPINT4	Q6UDR6	99 aa		5.16	□□□□□ -1.58
CDHR2-204	ENST00000508085	MT1E	P04732	61 aa		5.14	□□□□□ -1.59
CDHR2-204	ENST00000508085	LCE5A	Q5TCM9	118 aa		5.12	□□□□□ -1.59
CDHR2-204	ENST00000508085	ANAPC13	Q9BS18	74 aa		5.12	□□□□□ -1.59
CDHR2-204	ENST00000508085		A0A1B0GU69	56 aa		5.09	□□□□□ -1.59
CDHR2-204	ENST00000508085	KRTAP19-3	Q7Z4W3	81 aa		5.08	□□□□□ -1.6
CDHR2-204	ENST00000508085		A8MU10	97 aa		5.06	□□□□□ -1.6
CDHR2-204	ENST00000508085	CCDC179	H3BU77	68 aa		5.06	□□□□□ -1.6
CDHR2-204	ENST00000508085	SMIM26	A0A096LP01	95 aa		5.05	□□□□□ -1.6
CDHR2-204	ENST00000508085	KRTAP19-5	Q3LI72	72 aa		5.05	□□□□□ -1.6
CDHR2-204	ENST00000508085	ATP5E	P56381	51 aa	Predicted RBP	4.96	□□□□□ -1.62
CDHR2-204	ENST00000508085	C10orf95	Q9H7T3	257 aa		4.96	□□□□□ -1.62
CDHR2-204	ENST00000508085	MT1G	P13640	62 aa		4.95	□□□□□ -1.62
CDHR2-204	ENST00000508085	DST	Q03001	7570 aa	Known RBP	4.95	□□□□□ -1.62
CDHR2-204	ENST00000508085	LCE3A	Q5TA76	89 aa		4.93	□□□□□ -1.62
CDHR2-204	ENST00000508085	MT1L	Q93083	61 aa		4.91	□□□□□ -1.62
CDHR2-204	ENST00000508085	PRR15L	Q9BU68	103 aa		4.91	□□□□□ -1.62
CDHR2-204	ENST00000508085	LINC01558	Q9Y6Z2	57 aa		4.91	□□□□□ -1.62
CDHR2-204	ENST00000508085	MT1M	Q8N339	61 aa		4.9	□□□□□ -1.63
CDHR2-204	ENST00000508085	TNP1	P09430	55 aa		4.89	□□□□□ -1.63
CDHR2-204	ENST00000508085	PP632	Q6XCG6	107 aa		4.88	□□□□□ -1.63
CDHR2-204	ENST00000508085	KRTAP4-9	Q9BYQ8	210 aa		4.88	□□□□□ -1.63
CDHR2-204	ENST00000508085	TMEM258	P61165	79 aa		4.82	□□□□□ -1.64
CDHR2-204	ENST00000508085	KRTAP4-3	Q9BYR4	195 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 2121 ms