RNA–Protein interactions for RNA: ENST00000507327.5

RPS3A-205, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-205ENST00000507327 CCDC168Q8NDH2 2452 aa1.74□□□□□ -2.13
RPS3A-205ENST00000507327 SONP18583 2426 aaKnown RBP1.74□□□□□ -2.13
RPS3A-205ENST00000507327 USP9YO00507 2555 aaPredicted RBP1.73□□□□□ -2.13
RPS3A-205ENST00000507327 VPS13DQ5THJ4 4388 aa1.73□□□□□ -2.13
RPS3A-205ENST00000507327 HELZ2Q9BYK8 2649 aaKnown RBP1.73□□□□□ -2.13
RPS3A-205ENST00000507327 FRAS1Q86XX4 4008 aa1.73□□□□□ -2.13
RPS3A-205ENST00000507327 NIPBLQ6KC79 2804 aaeCLIP1.72□□□□□ -2.13
RPS3A-205ENST00000507327 INE1O15225 51 aa1.72□□□□□ -2.13
RPS3A-205ENST00000507327 ANK2Q01484 3957 aa1.72□□□□□ -2.13
RPS3A-205ENST00000507327 VWFP04275 2813 aa1.72□□□□□ -2.13
RPS3A-205ENST00000507327 COL6A5A8TX70 2615 aa1.71□□□□□ -2.13
RPS3A-205ENST00000507327 ZFHX2Q9C0A1 2572 aaPredicted RBP1.71□□□□□ -2.14
RPS3A-205ENST00000507327 BAHCC1Q9P281 2608 aa1.71□□□□□ -2.14
RPS3A-205ENST00000507327 SETD2Q9BYW2 2564 aaPredicted RBP1.71□□□□□ -2.14
RPS3A-205ENST00000507327 DNAH7Q8WXX0 4024 aa1.71□□□□□ -2.14
RPS3A-205ENST00000507327 LYSTQ99698 3801 aa1.71□□□□□ -2.14
RPS3A-205ENST00000507327 PKD1L2Q7Z442 2459 aa1.71□□□□□ -2.14
RPS3A-205ENST00000507327 CSMD2Q7Z408 3487 aa1.7□□□□□ -2.14
RPS3A-205ENST00000507327 C9orf92A6NGG3 77 aa1.7□□□□□ -2.14
RPS3A-205ENST00000507327 ACACBO00763 2458 aa1.7□□□□□ -2.14
RPS3A-205ENST00000507327 FLNAP21333 2647 aaKnown RBP1.7□□□□□ -2.14
RPS3A-205ENST00000507327 PRKDCP78527 4128 aaKnown RBP1.7□□□□□ -2.14
RPS3A-205ENST00000507327 MUC3AQ02505 3323 aa1.7□□□□□ -2.14
RPS3A-205ENST00000507327 PKD1L1Q8TDX9 2849 aa1.69□□□□□ -2.14
RPS3A-205ENST00000507327 CMYA5Q8N3K9 4069 aa1.69□□□□□ -2.14
RPS3A-205ENST00000507327 ABCA12Q86UK0 2595 aa1.69□□□□□ -2.14
RPS3A-205ENST00000507327 DYNC2H1Q8NCM8 4307 aaKnown RBP1.68□□□□□ -2.14
RPS3A-205ENST00000507327 PDZD2O15018 2839 aa1.68□□□□□ -2.14
RPS3A-205ENST00000507327 TGP01266 2768 aa1.68□□□□□ -2.14
RPS3A-205ENST00000507327 J3QKU1 62 aa1.67□□□□□ -2.14
RPS3A-205ENST00000507327 DNAH8Q96JB1 4490 aa1.67□□□□□ -2.14
RPS3A-205ENST00000507327 TENM3Q9P273 2699 aa1.67□□□□□ -2.14
RPS3A-205ENST00000507327 POLQO75417 2590 aa1.66□□□□□ -2.14
RPS3A-205ENST00000507327 NBEAL1Q6ZS30 2694 aa1.66□□□□□ -2.14
RPS3A-205ENST00000507327 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
RPS3A-205ENST00000507327 DNAH10Q8IVF4 4471 aa1.66□□□□□ -2.14
RPS3A-205ENST00000507327 SPRR5A0A1B0GTR4 108 aa1.66□□□□□ -2.14
RPS3A-205ENST00000507327 TEP1Q99973 2627 aaKnown RBP1.66□□□□□ -2.14
RPS3A-205ENST00000507327 FLNCQ14315 2725 aa1.65□□□□□ -2.15
RPS3A-205ENST00000507327 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
RPS3A-205ENST00000507327 CUBNO60494 3623 aa1.65□□□□□ -2.15
RPS3A-205ENST00000507327 DNAH17Q9UFH2 4485 aa1.65□□□□□ -2.15
RPS3A-205ENST00000507327 MAST4O15021 2626 aa1.65□□□□□ -2.15
RPS3A-205ENST00000507327 HECTD4Q9Y4D8 3996 aa1.65□□□□□ -2.15
RPS3A-205ENST00000507327 KRTAP10-10P60014 251 aa1.64□□□□□ -2.15
RPS3A-205ENST00000507327 R4GN34 69 aa1.64□□□□□ -2.15
RPS3A-205ENST00000507327 DNAH9Q9NYC9 4486 aa1.64□□□□□ -2.15
RPS3A-205ENST00000507327 IGSF10Q6WRI0 2623 aa1.63□□□□□ -2.15
RPS3A-205ENST00000507327 FASNP49327 2511 aaKnown RBP1.63□□□□□ -2.15
RPS3A-205ENST00000507327 ACANP16112 2415 aa1.62□□□□□ -2.15
RPS3A-205ENST00000507327 FAM208BQ5VWN6 2430 aa1.62□□□□□ -2.15
RPS3A-205ENST00000507327 DNAH11Q96DT5 4516 aa1.61□□□□□ -2.15
RPS3A-205ENST00000507327 Q5VSD8 79 aa1.61□□□□□ -2.15
RPS3A-205ENST00000507327 ITPR2Q14571 2701 aa1.61□□□□□ -2.15
RPS3A-205ENST00000507327 MYO18BQ8IUG5 2567 aa1.61□□□□□ -2.15
RPS3A-205ENST00000507327 CSMD3Q7Z407 3707 aa1.61□□□□□ -2.15
RPS3A-205ENST00000507327 HUWE1Q7Z6Z7 4374 aaKnown RBP1.6□□□□□ -2.15
RPS3A-205ENST00000507327 CACNA1AO00555 2505 aa1.6□□□□□ -2.15
RPS3A-205ENST00000507327 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
RPS3A-205ENST00000507327 COL7A1Q02388 2944 aa1.6□□□□□ -2.15
RPS3A-205ENST00000507327 ZNF469Q96JG9 3925 aaPredicted RBP1.6□□□□□ -2.15
RPS3A-205ENST00000507327 FLNBO75369 2602 aaKnown RBP1.6□□□□□ -2.15
RPS3A-205ENST00000507327 DNAH2Q9P225 4427 aa1.59□□□□□ -2.15
RPS3A-205ENST00000507327 FBN3Q75N90 2809 aa1.59□□□□□ -2.16
RPS3A-205ENST00000507327 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.16
RPS3A-205ENST00000507327 STAB2Q8WWQ8 2551 aa1.58□□□□□ -2.16
RPS3A-205ENST00000507327 SACSQ9NZJ4 4579 aa1.58□□□□□ -2.16
RPS3A-205ENST00000507327 TNP1P09430 55 aa1.58□□□□□ -2.16
RPS3A-205ENST00000507327 ATRQ13535 2644 aa1.57□□□□□ -2.16
RPS3A-205ENST00000507327 USP24Q9UPU5 2620 aa1.56□□□□□ -2.16
RPS3A-205ENST00000507327 KMT2AQ03164 3969 aa1.56□□□□□ -2.16
RPS3A-205ENST00000507327 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
RPS3A-205ENST00000507327 NOTCH1P46531 2555 aa1.53□□□□□ -2.16
RPS3A-205ENST00000507327 PLECQ15149 4684 aaKnown RBP1.53□□□□□ -2.16
RPS3A-205ENST00000507327 MYCBP2O75592 4640 aa1.52□□□□□ -2.17
RPS3A-205ENST00000507327 KRTAP10-4P60372 401 aaPredicted RBP1.52□□□□□ -2.17
RPS3A-205ENST00000507327 DMBT1Q9UGM3 2413 aaPredicted RBP1.51□□□□□ -2.17
RPS3A-205ENST00000507327 PKHD1L1Q86WI1 4243 aa1.51□□□□□ -2.17
RPS3A-205ENST00000507327 PKHD1P08F94 4074 aa1.51□□□□□ -2.17
RPS3A-205ENST00000507327 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
RPS3A-205ENST00000507327 STAB1Q9NY15 2570 aa1.49□□□□□ -2.17
RPS3A-205ENST00000507327 DNAH5Q8TE73 4624 aa1.49□□□□□ -2.17
RPS3A-205ENST00000507327 TNXBP22105 4242 aa1.49□□□□□ -2.17
RPS3A-205ENST00000507327 VPS13BQ7Z7G8 4022 aa1.48□□□□□ -2.17
RPS3A-205ENST00000507327 SMR3BP02814 79 aaPredicted RBP1.48□□□□□ -2.17
RPS3A-205ENST00000507327 PKD1P98161 4303 aa1.47□□□□□ -2.17
RPS3A-205ENST00000507327 STARD9Q9P2P6 4700 aa1.47□□□□□ -2.17
RPS3A-205ENST00000507327 LRP1Q07954 4544 aaKnown RBP1.47□□□□□ -2.17
RPS3A-205ENST00000507327 APOBP04114 4563 aaKnown RBP1.45□□□□□ -2.18
RPS3A-205ENST00000507327 DYNC1H1Q14204 4646 aaKnown RBP1.44□□□□□ -2.18
RPS3A-205ENST00000507327 HSPG2P98160 4391 aa1.44□□□□□ -2.18
RPS3A-205ENST00000507327 FAT2Q9NYQ8 4349 aa1.44□□□□□ -2.18
RPS3A-205ENST00000507327 LRP1BQ9NZR2 4599 aa1.44□□□□□ -2.18
RPS3A-205ENST00000507327 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
RPS3A-205ENST00000507327 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
RPS3A-205ENST00000507327 FAT1Q14517 4588 aa1.41□□□□□ -2.18
RPS3A-205ENST00000507327 FAT3Q8TDW7 4589 aa1.41□□□□□ -2.18
RPS3A-205ENST00000507327 KRTAP8-1Q8IUC2 63 aa1.41□□□□□ -2.18
RPS3A-205ENST00000507327 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
RPS3A-205ENST00000507327 MT1HL1P0DM35 61 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms