RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 SACSQ9NZJ4 4579 aa5.07□□□□□ -1.6
PHF3-208ENST00000506783 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
PHF3-208ENST00000506783 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
PHF3-208ENST00000506783 RYR1P21817 5038 aa5.03□□□□□ -1.6
PHF3-208ENST00000506783 RYR3Q15413 4870 aa5.02□□□□□ -1.61
PHF3-208ENST00000506783 P0C880 135 aa5.01□□□□□ -1.61
PHF3-208ENST00000506783 A8MUU9 505 aa5.01□□□□□ -1.61
PHF3-208ENST00000506783 S4R3F8 94 aa5.01□□□□□ -1.61
PHF3-208ENST00000506783 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
PHF3-208ENST00000506783 LRP2P98164 4655 aa4.98□□□□□ -1.61
PHF3-208ENST00000506783 PKD1P98161 4303 aa4.97□□□□□ -1.61
PHF3-208ENST00000506783 HSPG2P98160 4391 aa4.95□□□□□ -1.62
PHF3-208ENST00000506783 RPL37P61927 97 aaKnown RBP4.95□□□□□ -1.62
PHF3-208ENST00000506783 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
PHF3-208ENST00000506783 XP32Q5T750 250 aa4.94□□□□□ -1.62
PHF3-208ENST00000506783 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
PHF3-208ENST00000506783 LPAP08519 4548 aa4.93□□□□□ -1.62
PHF3-208ENST00000506783 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
PHF3-208ENST00000506783 MUC2Q02817 5179 aa4.91□□□□□ -1.62
PHF3-208ENST00000506783 RYR2Q92736 4967 aa4.9□□□□□ -1.63
PHF3-208ENST00000506783 ROMO1P60602 79 aa4.89□□□□□ -1.63
PHF3-208ENST00000506783 M0QZ58 72 aa4.88□□□□□ -1.63
PHF3-208ENST00000506783 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
PHF3-208ENST00000506783 R4GN34 69 aa4.86□□□□□ -1.63
PHF3-208ENST00000506783 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
PHF3-208ENST00000506783 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
PHF3-208ENST00000506783 M0R2T5 61 aa4.82□□□□□ -1.64
PHF3-208ENST00000506783 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
PHF3-208ENST00000506783 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
PHF3-208ENST00000506783 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
PHF3-208ENST00000506783 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
PHF3-208ENST00000506783 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
PHF3-208ENST00000506783 KRTAP3-3Q9BYR6 98 aa4.79□□□□□ -1.64
PHF3-208ENST00000506783 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
PHF3-208ENST00000506783 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
PHF3-208ENST00000506783 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
PHF3-208ENST00000506783 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
PHF3-208ENST00000506783 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
PHF3-208ENST00000506783 HERC2O95714 4834 aa4.74□□□□□ -1.65
PHF3-208ENST00000506783 KRTAP3-2Q9BYR7 98 aa4.72□□□□□ -1.65
PHF3-208ENST00000506783 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
PHF3-208ENST00000506783 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.66
PHF3-208ENST00000506783 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
PHF3-208ENST00000506783 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
PHF3-208ENST00000506783 TNXBP22105 4242 aa4.59□□□□□ -1.67
PHF3-208ENST00000506783 HERC1Q15751 4861 aa4.55□□□□□ -1.68
PHF3-208ENST00000506783 BIRC6Q9NR09 4857 aa4.54□□□□□ -1.68
PHF3-208ENST00000506783 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
PHF3-208ENST00000506783 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
PHF3-208ENST00000506783 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
PHF3-208ENST00000506783 LUZP6Q538Z0 58 aa4.45□□□□□ -1.7
PHF3-208ENST00000506783 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
PHF3-208ENST00000506783 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
PHF3-208ENST00000506783 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
PHF3-208ENST00000506783 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
PHF3-208ENST00000506783 KRTAP15-1Q3LI76 137 aa4.36□□□□□ -1.71
PHF3-208ENST00000506783 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
PHF3-208ENST00000506783 TNP1P09430 55 aa4.3□□□□□ -1.72
PHF3-208ENST00000506783 USH2AO75445 5202 aa4.23□□□□□ -1.73
PHF3-208ENST00000506783 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
PHF3-208ENST00000506783 KMT2DO14686 5537 aa4.13□□□□□ -1.75
PHF3-208ENST00000506783 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
PHF3-208ENST00000506783 MT1HP80294 61 aa4.07□□□□□ -1.76
PHF3-208ENST00000506783 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
PHF3-208ENST00000506783 FLGP20930 4061 aaPredicted RBP4.07□□□□□ -1.76
PHF3-208ENST00000506783 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
PHF3-208ENST00000506783 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
PHF3-208ENST00000506783 MT1FP04733 61 aa3.98□□□□□ -1.77
PHF3-208ENST00000506783 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
PHF3-208ENST00000506783 MT2AP02795 61 aa3.95□□□□□ -1.78
PHF3-208ENST00000506783 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
PHF3-208ENST00000506783 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
PHF3-208ENST00000506783 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PHF3-208ENST00000506783 PRO2289Q9P1D8 64 aa3.85□□□□□ -1.79
PHF3-208ENST00000506783 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
PHF3-208ENST00000506783 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
PHF3-208ENST00000506783 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
PHF3-208ENST00000506783 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
PHF3-208ENST00000506783 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
PHF3-208ENST00000506783 SPRR2GQ9BYE4 73 aa3.81□□□□□ -1.8
PHF3-208ENST00000506783 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
PHF3-208ENST00000506783 KRTAP4-8A0A0G2JLE6 195 aa3.77□□□□□ -1.81
PHF3-208ENST00000506783 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
PHF3-208ENST00000506783 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
PHF3-208ENST00000506783 LCE2BO14633 110 aa3.74□□□□□ -1.81
PHF3-208ENST00000506783 MT1XP80297 61 aa3.72□□□□□ -1.81
PHF3-208ENST00000506783 MT1BP07438 61 aa3.72□□□□□ -1.81
PHF3-208ENST00000506783 KRTAP10-5P60370 271 aa3.71□□□□□ -1.81
PHF3-208ENST00000506783 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
PHF3-208ENST00000506783 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
PHF3-208ENST00000506783 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
PHF3-208ENST00000506783 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
PHF3-208ENST00000506783 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
PHF3-208ENST00000506783 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
PHF3-208ENST00000506783 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
PHF3-208ENST00000506783 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
PHF3-208ENST00000506783 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
PHF3-208ENST00000506783 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
PHF3-208ENST00000506783 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
PHF3-208ENST00000506783 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms