RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 A8MUU9 505 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 ABCA13Q86UQ4 5058 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 VPS13CQ709C8 3753 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 LCE2CQ5TA81 110 aa1.47□□□□□ -2.17
ITGA1-204ENST00000506275 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP4-7Q9BYR0 210 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 GPR98Q8WXG9 6306 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 LCE6AA0A183 80 aa1.46□□□□□ -2.18
ITGA1-204ENST00000506275 PKHD1L1Q86WI1 4243 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP16-1A8MUX0 517 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 DNAH17Q9UFH2 4485 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP23-1A1A580 65 aa1.45□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP10-8P60410 259 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-9Q9BYP9 154 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-4Q9BYQ2 154 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-6A0A140TA67 174 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP9-8Q9BYQ0 159 aa1.44□□□□□ -2.18
ITGA1-204ENST00000506275 UBR4Q5T4S7 5183 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 XP32Q5T750 250 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 PKHD1P08F94 4074 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 HECTD4Q9Y4D8 3996 aa1.43□□□□□ -2.18
ITGA1-204ENST00000506275 LORP23490 312 aaPredicted RBP1.43□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP4-16G5E9R7 235 aaPredicted RBP1.42□□□□□ -2.18
ITGA1-204ENST00000506275 SPRR1BP22528 89 aa1.42□□□□□ -2.18
ITGA1-204ENST00000506275 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP29-1A8MX34 341 aaPredicted RBP1.42□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP13-2Q52LG2 175 aa1.42□□□□□ -2.18
ITGA1-204ENST00000506275 KIAA1109Q2LD37 5005 aa1.41□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP7-1Q8IUC3 87 aa1.41□□□□□ -2.18
ITGA1-204ENST00000506275 KRTAP25-1Q3LHN0 102 aa1.41□□□□□ -2.18
ITGA1-204ENST00000506275 TNP1P09430 55 aa1.4□□□□□ -2.18
ITGA1-204ENST00000506275 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
ITGA1-204ENST00000506275 KRTAP10-10P60014 251 aa1.39□□□□□ -2.19
ITGA1-204ENST00000506275 Q6ZRN7 208 aaPredicted RBP1.38□□□□□ -2.19
ITGA1-204ENST00000506275 ASB16-AS1Q495Z4 193 aa1.38□□□□□ -2.19
ITGA1-204ENST00000506275 A6NN06 94 aa1.37□□□□□ -2.19
ITGA1-204ENST00000506275 FRAS1Q86XX4 4008 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 VPS13DQ5THJ4 4388 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 KRTAP4-9Q9BYQ8 210 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 TNXBP22105 4242 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 P0C880 135 aa1.36□□□□□ -2.19
ITGA1-204ENST00000506275 H0YAA0 97 aa1.34□□□□□ -2.19
ITGA1-204ENST00000506275 HERC1Q15751 4861 aa1.34□□□□□ -2.19
ITGA1-204ENST00000506275 RNF213Q63HN8 5207 aa1.34□□□□□ -2.2
ITGA1-204ENST00000506275 DNAH2Q9P225 4427 aa1.34□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP15-1Q3LI76 137 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP13-1Q8IUC0 172 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 SACSQ9NZJ4 4579 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 HSPG2P98160 4391 aa1.33□□□□□ -2.2
ITGA1-204ENST00000506275 DNAH11Q96DT5 4516 aa1.32□□□□□ -2.2
ITGA1-204ENST00000506275 HERC2O95714 4834 aa1.32□□□□□ -2.2
ITGA1-204ENST00000506275 FAT2Q9NYQ8 4349 aa1.32□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP1-4P0C5Y4 121 aa1.31□□□□□ -2.2
ITGA1-204ENST00000506275 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP5-9P26371 169 aa1.3□□□□□ -2.2
ITGA1-204ENST00000506275 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
ITGA1-204ENST00000506275 PKD1P98161 4303 aa1.29□□□□□ -2.2
ITGA1-204ENST00000506275 RPS29P62273 56 aaKnown RBP1.29□□□□□ -2.2
ITGA1-204ENST00000506275 FAT4Q6V0I7 4981 aa1.29□□□□□ -2.2
ITGA1-204ENST00000506275 PRO2289Q9P1D8 64 aa1.28□□□□□ -2.2
ITGA1-204ENST00000506275 KRTAP12-2P59991 146 aa1.28□□□□□ -2.2
ITGA1-204ENST00000506275 PP632Q6XCG6 107 aa1.27□□□□□ -2.21
ITGA1-204ENST00000506275 DNAH9Q9NYC9 4486 aa1.27□□□□□ -2.21
ITGA1-204ENST00000506275 MUC2Q02817 5179 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 TPRXLQ17RH7 258 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP13-3Q3SY46 172 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
ITGA1-204ENST00000506275 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
ITGA1-204ENST00000506275 LRP2P98164 4655 aa1.25□□□□□ -2.21
ITGA1-204ENST00000506275 DYNC1H1Q14204 4646 aaKnown RBP1.25□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP3-1Q9BYR8 98 aa1.24□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP4-11Q9BYQ6 195 aa1.23□□□□□ -2.21
ITGA1-204ENST00000506275 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
ITGA1-204ENST00000506275 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
ITGA1-204ENST00000506275 KRTAP19-1Q8IUB9 90 aa1.22□□□□□ -2.21
ITGA1-204ENST00000506275 LCE1DQ5T752 114 aa1.21□□□□□ -2.22
ITGA1-204ENST00000506275 STARD9Q9P2P6 4700 aa1.21□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP13-4Q3LI77 160 aa1.21□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP19-4Q3LI73 84 aa1.2□□□□□ -2.22
ITGA1-204ENST00000506275 DNAH8Q96JB1 4490 aa1.19□□□□□ -2.22
ITGA1-204ENST00000506275 LRP1Q07954 4544 aaKnown RBP1.17□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP5-4Q6L8H1 288 aa1.17□□□□□ -2.22
ITGA1-204ENST00000506275 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
ITGA1-204ENST00000506275 MUC12Q9UKN1 5478 aa1.17□□□□□ -2.22
ITGA1-204ENST00000506275 PLECQ15149 4684 aaKnown RBP1.17□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP10-6P60371 365 aaPredicted RBP1.16□□□□□ -2.22
ITGA1-204ENST00000506275 LCE3BQ5TA77 95 aa1.15□□□□□ -2.22
ITGA1-204ENST00000506275 KRTAP10-5P60370 271 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 KRTAP10-12P60413 245 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 LCE4AQ5TA78 99 aa1.14□□□□□ -2.23
ITGA1-204ENST00000506275 FAT1Q14517 4588 aa1.13□□□□□ -2.23
ITGA1-204ENST00000506275 MYCBP2O75592 4640 aa1.13□□□□□ -2.23
ITGA1-204ENST00000506275 DNAH10Q8IVF4 4471 aa1.12□□□□□ -2.23
ITGA1-204ENST00000506275 DNAH5Q8TE73 4624 aa1.12□□□□□ -2.23
ITGA1-204ENST00000506275 MT1HL1P0DM35 61 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms