RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 A0A087WVE0 104 aa5.34□□□□□ -1.55
SNHG4-202ENST00000505522 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
SNHG4-202ENST00000505522 NEBP20929 6669 aa5.33□□□□□ -1.56
SNHG4-202ENST00000505522 LOC105371267A0A1B0GV96 52 aa5.33□□□□□ -1.56
SNHG4-202ENST00000505522 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
SNHG4-202ENST00000505522 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
SNHG4-202ENST00000505522 K7EP34 96 aa5.31□□□□□ -1.56
SNHG4-202ENST00000505522 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
SNHG4-202ENST00000505522 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
SNHG4-202ENST00000505522 COL5A1-AS1Q5SY13 56 aa5.28□□□□□ -1.56
SNHG4-202ENST00000505522 KMT2DO14686 5537 aa5.25□□□□□ -1.57
SNHG4-202ENST00000505522 TRAV22A0A0B4J277 110 aa5.24□□□□□ -1.57
SNHG4-202ENST00000505522 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
SNHG4-202ENST00000505522 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
SNHG4-202ENST00000505522 ETDBQ3ZM63 59 aa5.22□□□□□ -1.57
SNHG4-202ENST00000505522 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
SNHG4-202ENST00000505522 F8W1H4 67 aa5.19□□□□□ -1.58
SNHG4-202ENST00000505522 H0YAA0 97 aa5.19□□□□□ -1.58
SNHG4-202ENST00000505522 NDUFC1O43677 76 aa5.19□□□□□ -1.58
SNHG4-202ENST00000505522 GTF2H5Q6ZYL4 71 aa5.19□□□□□ -1.58
SNHG4-202ENST00000505522 H0Y9P7 68 aa5.15□□□□□ -1.59
SNHG4-202ENST00000505522 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
SNHG4-202ENST00000505522 MT1XP80297 61 aa5.15□□□□□ -1.59
SNHG4-202ENST00000505522 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.59
SNHG4-202ENST00000505522 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
SNHG4-202ENST00000505522 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
SNHG4-202ENST00000505522 UQCRQO14949 82 aa5.14□□□□□ -1.59
SNHG4-202ENST00000505522 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
SNHG4-202ENST00000505522 A8MUN3 132 aa5.13□□□□□ -1.59
SNHG4-202ENST00000505522 ATOX1O00244 68 aa5.12□□□□□ -1.59
SNHG4-202ENST00000505522 ACYP1P07311 99 aa5.12□□□□□ -1.59
SNHG4-202ENST00000505522 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
SNHG4-202ENST00000505522 SPRR2EP22531 72 aa5.11□□□□□ -1.59
SNHG4-202ENST00000505522 SPRR2BP35325 72 aa5.11□□□□□ -1.59
SNHG4-202ENST00000505522 SPRR2AP35326 72 aa5.11□□□□□ -1.59
SNHG4-202ENST00000505522 HIST1H4AP62805 103 aaKnown RBP5.1□□□□□ -1.59
SNHG4-202ENST00000505522 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
SNHG4-202ENST00000505522 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
SNHG4-202ENST00000505522 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
SNHG4-202ENST00000505522 FAM240AA0A1B0GVK7 77 aa5.05□□□□□ -1.6
SNHG4-202ENST00000505522 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
SNHG4-202ENST00000505522 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
SNHG4-202ENST00000505522 P0C880 135 aa5.03□□□□□ -1.6
SNHG4-202ENST00000505522 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
SNHG4-202ENST00000505522 PCP4L1A6NKN8 68 aa5.02□□□□□ -1.61
SNHG4-202ENST00000505522 R4GN34 69 aa5.02□□□□□ -1.61
SNHG4-202ENST00000505522 LCE4AQ5TA78 99 aa5□□□□□ -1.61
SNHG4-202ENST00000505522 M0QZ58 72 aa4.99□□□□□ -1.61
SNHG4-202ENST00000505522 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
SNHG4-202ENST00000505522 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
SNHG4-202ENST00000505522 MP68P56378 58 aa4.97□□□□□ -1.61
SNHG4-202ENST00000505522 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
SNHG4-202ENST00000505522 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SNHG4-202ENST00000505522 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
SNHG4-202ENST00000505522 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
SNHG4-202ENST00000505522 SPRR2DP22532 72 aa4.95□□□□□ -1.62
SNHG4-202ENST00000505522 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
SNHG4-202ENST00000505522 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
SNHG4-202ENST00000505522 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
SNHG4-202ENST00000505522 H3BPC8 53 aa4.87□□□□□ -1.63
SNHG4-202ENST00000505522 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
SNHG4-202ENST00000505522 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
SNHG4-202ENST00000505522 TRAV7A0A075B6U4 112 aa4.78□□□□□ -1.64
SNHG4-202ENST00000505522 SCGB1A1P11684 91 aa4.78□□□□□ -1.64
SNHG4-202ENST00000505522 MT-ATP8P03928 68 aa4.77□□□□□ -1.65
SNHG4-202ENST00000505522 ACYP2P14621 99 aa4.74□□□□□ -1.65
SNHG4-202ENST00000505522 A0A1B0GV90 55 aa4.73□□□□□ -1.65
SNHG4-202ENST00000505522 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
SNHG4-202ENST00000505522 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
SNHG4-202ENST00000505522 J3QR89 54 aa4.67□□□□□ -1.66
SNHG4-202ENST00000505522 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
SNHG4-202ENST00000505522 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
SNHG4-202ENST00000505522 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
SNHG4-202ENST00000505522 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
SNHG4-202ENST00000505522 SMIM20Q8N5G0 67 aa4.59□□□□□ -1.67
SNHG4-202ENST00000505522 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
SNHG4-202ENST00000505522 MT1EP04732 61 aa4.57□□□□□ -1.68
SNHG4-202ENST00000505522 SNURFQ9Y675 71 aa4.57□□□□□ -1.68
SNHG4-202ENST00000505522 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
SNHG4-202ENST00000505522 H3BS24 57 aa4.52□□□□□ -1.69
SNHG4-202ENST00000505522 SPANXA2-OT1Q8N9U9 137 aa4.5□□□□□ -1.69
SNHG4-202ENST00000505522 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.7
SNHG4-202ENST00000505522 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
SNHG4-202ENST00000505522 A0A0D9SG42 100 aa4.45□□□□□ -1.7
SNHG4-202ENST00000505522 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
SNHG4-202ENST00000505522 MT1GP13640 62 aa4.42□□□□□ -1.7
SNHG4-202ENST00000505522 K7ERU9 68 aa4.41□□□□□ -1.7
SNHG4-202ENST00000505522 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
SNHG4-202ENST00000505522 COA5Q86WW8 74 aa4.41□□□□□ -1.7
SNHG4-202ENST00000505522 GPR98Q8WXG9 6306 aa4.4□□□□□ -1.71
SNHG4-202ENST00000505522 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
SNHG4-202ENST00000505522 SERP2Q8N6R1 65 aa4.38□□□□□ -1.71
SNHG4-202ENST00000505522 SEC61GP60059 68 aa4.37□□□□□ -1.71
SNHG4-202ENST00000505522 SERP1Q9Y6X1 66 aa4.37□□□□□ -1.71
SNHG4-202ENST00000505522 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
SNHG4-202ENST00000505522 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SNHG4-202ENST00000505522 MT1MQ8N339 61 aa4.36□□□□□ -1.71
SNHG4-202ENST00000505522 MT4P47944 62 aa4.35□□□□□ -1.71
SNHG4-202ENST00000505522 A0A1B0GU33 70 aa4.34□□□□□ -1.71
SNHG4-202ENST00000505522 MT1LQ93083 61 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms