RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 AHNAK2Q8IVF2 5795 aa0.14□□□□□ -2.39
HMGB1P22-201ENST00000505315 RANBP2P49792 3224 aaKnown RBP0.14□□□□□ -2.39
HMGB1P22-201ENST00000505315 ARHGAP5-AS1Q96IT6 56 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 KMT2DO14686 5537 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 DNAH11Q96DT5 4516 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 TLN2Q9Y4G6 2542 aa0.13□□□□□ -2.39
HMGB1P22-201ENST00000505315 SMR3BP02814 79 aaPredicted RBP0.12□□□□□ -2.39
HMGB1P22-201ENST00000505315 DEFB104AQ8WTQ1 72 aa0.12□□□□□ -2.39
HMGB1P22-201ENST00000505315 DNAH2Q9P225 4427 aa0.12□□□□□ -2.39
HMGB1P22-201ENST00000505315 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 APOBP04114 4563 aaKnown RBP0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 KRTAP19-5Q3LI72 72 aa0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 MDN1Q9NU22 5596 aa0.11□□□□□ -2.39
HMGB1P22-201ENST00000505315 KALRNO60229 2985 aa0.1□□□□□ -2.39
HMGB1P22-201ENST00000505315 HTTP42858 3142 aa0.1□□□□□ -2.39
HMGB1P22-201ENST00000505315 FAT3Q8TDW7 4589 aa0.1□□□□□ -2.39
HMGB1P22-201ENST00000505315 TRIOO75962 3097 aa0.09□□□□□ -2.39
HMGB1P22-201ENST00000505315 LAMA1P25391 3075 aa0.09□□□□□ -2.4
HMGB1P22-201ENST00000505315 COL12A1Q99715 3063 aa0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 KRTAP19-7Q3SYF9 63 aa0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 USP9XQ93008 2570 aaPredicted RBP0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
HMGB1P22-201ENST00000505315 MXRA5Q9NR99 2828 aa0.07□□□□□ -2.4
HMGB1P22-201ENST00000505315 AKAP9Q99996 3911 aa0.07□□□□□ -2.4
HMGB1P22-201ENST00000505315 LAMA5O15230 3695 aa0.07□□□□□ -2.4
HMGB1P22-201ENST00000505315 DYNC2H1Q8NCM8 4307 aaKnown RBP0.06□□□□□ -2.4
HMGB1P22-201ENST00000505315 GPR98Q8WXG9 6306 aa0.06□□□□□ -2.4
HMGB1P22-201ENST00000505315 DNAH6Q9C0G6 4158 aa0.05□□□□□ -2.4
HMGB1P22-201ENST00000505315 USP9YO00507 2555 aaPredicted RBP0.04□□□□□ -2.4
HMGB1P22-201ENST00000505315 VPS13DQ5THJ4 4388 aa0.04□□□□□ -2.4
HMGB1P22-201ENST00000505315 KRTAP19-8Q3LI54 63 aa0.04□□□□□ -2.4
HMGB1P22-201ENST00000505315 SSPOA2VEC9 5147 aa0.03□□□□□ -2.4
HMGB1P22-201ENST00000505315 CELSR3Q9NYQ7 3312 aa0.03□□□□□ -2.4
HMGB1P22-201ENST00000505315 RHPN1-AS1Q9BWJ2 59 aa0.03□□□□□ -2.4
HMGB1P22-201ENST00000505315 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 TTTY10Q9BZA0 68 aa0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 FAT1Q14517 4588 aa0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 SPTAN1Q13813 2472 aaKnown RBP0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 DOPEY1Q5JWR5 2465 aa0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 HERC1Q15751 4861 aa0□□□□□ -2.41
HMGB1P22-201ENST00000505315 PRCDQ00LT1 54 aa0□□□□□ -2.41
HMGB1P22-201ENST00000505315 PCLOQ9Y6V0 5065 aa-0□□□□□ -2.41
HMGB1P22-201ENST00000505315 DNAH1Q9P2D7 4330 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 FSIP2Q5CZC0 6907 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 MT1HP80294 61 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 DEFB136Q30KP8 78 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 DNAH8Q96JB1 4490 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 MUC2Q02817 5179 aa-0.01□□□□□ -2.41
HMGB1P22-201ENST00000505315 MACF1Q9UPN3 7388 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 SPENQ96T58 3664 aaKnown RBP-0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 A0A096LNI7 61 aa-0.02□□□□□ -2.41
HMGB1P22-201ENST00000505315 CRYBG3Q68DQ2 2970 aa-0.03□□□□□ -2.41
HMGB1P22-201ENST00000505315 FRYQ5TBA9 3013 aa-0.03□□□□□ -2.41
HMGB1P22-201ENST00000505315 H3BSH0 61 aa-0.04□□□□□ -2.42
HMGB1P22-201ENST00000505315 CHD7Q9P2D1 2997 aa-0.05□□□□□ -2.42
HMGB1P22-201ENST00000505315 DNAH7Q8WXX0 4024 aa-0.05□□□□□ -2.42
HMGB1P22-201ENST00000505315 ITPR1Q14643 2758 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 SPTBN5Q9NRC6 3674 aaKnown RBP-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 ITPR3Q14573 2671 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 NBPF19A0A087WUL8 3843 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
HMGB1P22-201ENST00000505315 K7EIM0 57 aa-0.07□□□□□ -2.42
HMGB1P22-201ENST00000505315 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
HMGB1P22-201ENST00000505315 HTN1P15515 57 aa-0.09□□□□□ -2.42
HMGB1P22-201ENST00000505315 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
HMGB1P22-201ENST00000505315 MUC17Q685J3 4493 aa-0.1□□□□□ -2.43
HMGB1P22-201ENST00000505315 PLECQ15149 4684 aaKnown RBP-0.1□□□□□ -2.43
HMGB1P22-201ENST00000505315 STARD9Q9P2P6 4700 aa-0.11□□□□□ -2.43
HMGB1P22-201ENST00000505315 MT1EP04732 61 aa-0.11□□□□□ -2.43
HMGB1P22-201ENST00000505315 DNAH10Q8IVF4 4471 aa-0.11□□□□□ -2.43
HMGB1P22-201ENST00000505315 ADGRG4Q8IZF6 3080 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 ZFHX4Q86UP3 3567 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 DEFB4AO15263 64 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 C5orf42Q9H799 3197 aa-0.12□□□□□ -2.43
HMGB1P22-201ENST00000505315 MGAQ8IWI9 3026 aa-0.13□□□□□ -2.43
HMGB1P22-201ENST00000505315 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
HMGB1P22-201ENST00000505315 DEFB133Q30KQ1 61 aa-0.14□□□□□ -2.43
HMGB1P22-201ENST00000505315 CMYA5Q8N3K9 4069 aa-0.14□□□□□ -2.43
HMGB1P22-201ENST00000505315 MT1XP80297 61 aa-0.15□□□□□ -2.43
HMGB1P22-201ENST00000505315 MT1LQ93083 61 aa-0.15□□□□□ -2.43
HMGB1P22-201ENST00000505315 CEP250Q9BV73 2442 aa-0.15□□□□□ -2.43
HMGB1P22-201ENST00000505315 H3BUX3 64 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 CSMD1Q96PZ7 3565 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 RELNP78509 3460 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 USH2AO75445 5202 aa-0.16□□□□□ -2.44
HMGB1P22-201ENST00000505315 MYO9AB2RTY4 2548 aa-0.17□□□□□ -2.44
HMGB1P22-201ENST00000505315 RYR1P21817 5038 aa-0.17□□□□□ -2.44
HMGB1P22-201ENST00000505315 DYNC1H1Q14204 4646 aaKnown RBP-0.17□□□□□ -2.44
HMGB1P22-201ENST00000505315 KRTAP20-2Q3LI61 65 aa-0.18□□□□□ -2.44
HMGB1P22-201ENST00000505315 TMEM167AQ8TBQ9 72 aa-0.18□□□□□ -2.44
HMGB1P22-201ENST00000505315 DNAH17Q9UFH2 4485 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 LAMA3Q16787 3333 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 HERC2O95714 4834 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 CFAP46Q8IYW2 2715 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 TEX15Q9BXT5 2789 aa-0.19□□□□□ -2.44
HMGB1P22-201ENST00000505315 RYR3Q15413 4870 aa-0.2□□□□□ -2.44
HMGB1P22-201ENST00000505315 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
HMGB1P22-201ENST00000505315 LRBAP50851 2863 aa-0.21□□□□□ -2.44
HMGB1P22-201ENST00000505315 DEFB124Q8NES8 71 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms