RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 IMUPQ9GZP8 106 aa8.76□□□□□ -1.01
UBE2D3-220ENST00000505307 A0A087WVE0 104 aa8.72□□□□□ -1.01
UBE2D3-220ENST00000505307 ACYP1P07311 99 aa8.71□□□□□ -1.02
UBE2D3-220ENST00000505307 H0YAA0 97 aa8.69□□□□□ -1.02
UBE2D3-220ENST00000505307 NDUFC1O43677 76 aa8.69□□□□□ -1.02
UBE2D3-220ENST00000505307 ATOX1O00244 68 aa8.68□□□□□ -1.02
UBE2D3-220ENST00000505307 UQCRQO14949 82 aa8.68□□□□□ -1.02
UBE2D3-220ENST00000505307 KRTAP5-9P26371 169 aa8.68□□□□□ -1.02
UBE2D3-220ENST00000505307 ATP5EP2Q5VTU8 51 aa8.67□□□□□ -1.02
UBE2D3-220ENST00000505307 KRTAP20-1Q3LI63 56 aa8.64□□□□□ -1.03
UBE2D3-220ENST00000505307 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
UBE2D3-220ENST00000505307 H0Y9P7 68 aa8.62□□□□□ -1.03
UBE2D3-220ENST00000505307 A8MUN3 132 aa8.61□□□□□ -1.03
UBE2D3-220ENST00000505307 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-220ENST00000505307 MDN1Q9NU22 5596 aa8.59□□□□□ -1.03
UBE2D3-220ENST00000505307 KMT2DO14686 5537 aa8.59□□□□□ -1.03
UBE2D3-220ENST00000505307 PCP4L1A6NKN8 68 aa8.52□□□□□ -1.05
UBE2D3-220ENST00000505307 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
UBE2D3-220ENST00000505307 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
UBE2D3-220ENST00000505307 LINC00208Q96KT6 92 aa8.46□□□□□ -1.06
UBE2D3-220ENST00000505307 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
UBE2D3-220ENST00000505307 MP68P56378 58 aa8.43□□□□□ -1.06
UBE2D3-220ENST00000505307 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
UBE2D3-220ENST00000505307 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
UBE2D3-220ENST00000505307 MT1XP80297 61 aa8.38□□□□□ -1.07
UBE2D3-220ENST00000505307 C20orf197Q8N268 126 aa8.38□□□□□ -1.07
UBE2D3-220ENST00000505307 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
UBE2D3-220ENST00000505307 R4GN34 69 aa8.36□□□□□ -1.07
UBE2D3-220ENST00000505307 SPRR2FQ96RM1 72 aa8.35□□□□□ -1.07
UBE2D3-220ENST00000505307 KRTAP2-3P0C7H8 128 aa8.34□□□□□ -1.07
UBE2D3-220ENST00000505307 KRTAP2-4Q9BYR9 128 aa8.34□□□□□ -1.07
UBE2D3-220ENST00000505307 H3BPC8 53 aa8.3□□□□□ -1.08
UBE2D3-220ENST00000505307 SPRR2EP22531 72 aa8.29□□□□□ -1.08
UBE2D3-220ENST00000505307 SPRR2BP35325 72 aa8.29□□□□□ -1.08
UBE2D3-220ENST00000505307 SPRR2AP35326 72 aa8.29□□□□□ -1.08
UBE2D3-220ENST00000505307 P0C880 135 aa8.28□□□□□ -1.08
UBE2D3-220ENST00000505307 KRTAP12-2P59991 146 aa8.28□□□□□ -1.08
UBE2D3-220ENST00000505307 KRTAP8-1Q8IUC2 63 aa8.27□□□□□ -1.09
UBE2D3-220ENST00000505307 M0QZ58 72 aa8.26□□□□□ -1.09
UBE2D3-220ENST00000505307 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
UBE2D3-220ENST00000505307 SCGB1A1P11684 91 aa8.14□□□□□ -1.11
UBE2D3-220ENST00000505307 LCE1AQ5T7P2 110 aa8.14□□□□□ -1.11
UBE2D3-220ENST00000505307 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
UBE2D3-220ENST00000505307 TRAV7A0A075B6U4 112 aa8.1□□□□□ -1.11
UBE2D3-220ENST00000505307 J3QR89 54 aa8.1□□□□□ -1.11
UBE2D3-220ENST00000505307 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
UBE2D3-220ENST00000505307 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
UBE2D3-220ENST00000505307 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
UBE2D3-220ENST00000505307 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
UBE2D3-220ENST00000505307 ACYP2P14621 99 aa8.04□□□□□ -1.12
UBE2D3-220ENST00000505307 A0A1B0GV90 55 aa8.03□□□□□ -1.12
UBE2D3-220ENST00000505307 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
UBE2D3-220ENST00000505307 SPRR2DP22532 72 aa8.01□□□□□ -1.13
UBE2D3-220ENST00000505307 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
UBE2D3-220ENST00000505307 MT-ATP8P03928 68 aa7.97□□□□□ -1.13
UBE2D3-220ENST00000505307 KRTAP10-7P60409 375 aaPredicted RBP7.97□□□□□ -1.13
UBE2D3-220ENST00000505307 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.14
UBE2D3-220ENST00000505307 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
UBE2D3-220ENST00000505307 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
UBE2D3-220ENST00000505307 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
UBE2D3-220ENST00000505307 SNURFQ9Y675 71 aa7.68□□□□□ -1.18
UBE2D3-220ENST00000505307 K7ERU9 68 aa7.66□□□□□ -1.18
UBE2D3-220ENST00000505307 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
UBE2D3-220ENST00000505307 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
UBE2D3-220ENST00000505307 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
UBE2D3-220ENST00000505307 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
UBE2D3-220ENST00000505307 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-220ENST00000505307 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
UBE2D3-220ENST00000505307 GPR98Q8WXG9 6306 aa7.49□□□□□ -1.21
UBE2D3-220ENST00000505307 KRTAP19-7Q3SYF9 63 aa7.49□□□□□ -1.21
UBE2D3-220ENST00000505307 LCE5AQ5TCM9 118 aa7.49□□□□□ -1.21
UBE2D3-220ENST00000505307 SEC61GP60059 68 aa7.47□□□□□ -1.21
UBE2D3-220ENST00000505307 MT1EP04732 61 aa7.45□□□□□ -1.22
UBE2D3-220ENST00000505307 KRTAP19-3Q7Z4W3 81 aa7.45□□□□□ -1.22
UBE2D3-220ENST00000505307 SERP1Q9Y6X1 66 aa7.45□□□□□ -1.22
UBE2D3-220ENST00000505307 COA5Q86WW8 74 aa7.44□□□□□ -1.22
UBE2D3-220ENST00000505307 A0A0D9SG42 100 aa7.39□□□□□ -1.23
UBE2D3-220ENST00000505307 KRTAP4-9Q9BYQ8 210 aa7.38□□□□□ -1.23
UBE2D3-220ENST00000505307 A0A1B0GU33 70 aa7.32□□□□□ -1.24
UBE2D3-220ENST00000505307 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
UBE2D3-220ENST00000505307 SPINT4Q6UDR6 99 aa7.32□□□□□ -1.24
UBE2D3-220ENST00000505307 MT1GP13640 62 aa7.28□□□□□ -1.24
UBE2D3-220ENST00000505307 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
UBE2D3-220ENST00000505307 KRTAP12-1P59990 96 aa7.25□□□□□ -1.25
UBE2D3-220ENST00000505307 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
UBE2D3-220ENST00000505307 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
UBE2D3-220ENST00000505307 COX7CP15954 63 aa7.2□□□□□ -1.26
UBE2D3-220ENST00000505307 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.26
UBE2D3-220ENST00000505307 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
UBE2D3-220ENST00000505307 H7BZZ5 65 aa7.13□□□□□ -1.27
UBE2D3-220ENST00000505307 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
UBE2D3-220ENST00000505307 MT1MQ8N339 61 aa7.1□□□□□ -1.27
UBE2D3-220ENST00000505307 A0A1B0GU69 56 aa7.09□□□□□ -1.27
UBE2D3-220ENST00000505307 MT1LQ93083 61 aa7.09□□□□□ -1.27
UBE2D3-220ENST00000505307 MT4P47944 62 aa7.06□□□□□ -1.28
UBE2D3-220ENST00000505307 HMCN1Q96RW7 5635 aa7.04□□□□□ -1.28
UBE2D3-220ENST00000505307 TNP1P09430 55 aa7.02□□□□□ -1.29
UBE2D3-220ENST00000505307 A8MU10 97 aa6.99□□□□□ -1.29
UBE2D3-220ENST00000505307 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
UBE2D3-220ENST00000505307 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms