RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 LOC101927531A0A1B0GV80 90 aa2.28□□□□□ -2.04
TRAPPC13-207ENST00000505108 A6NED7 52 aa2.28□□□□□ -2.04
TRAPPC13-207ENST00000505108 LY6G6CO95867 125 aa2.28□□□□□ -2.04
TRAPPC13-207ENST00000505108 SSBP3-AS1Q7Z2R9 100 aa2.28□□□□□ -2.04
TRAPPC13-207ENST00000505108 DNAH17Q9UFH2 4485 aa2.28□□□□□ -2.04
TRAPPC13-207ENST00000505108 VPS13DQ5THJ4 4388 aa2.27□□□□□ -2.05
TRAPPC13-207ENST00000505108 PRR15LQ9BU68 103 aa2.27□□□□□ -2.05
TRAPPC13-207ENST00000505108 LINC01558Q9Y6Z2 57 aa2.27□□□□□ -2.05
TRAPPC13-207ENST00000505108 LCA10Q71F78 164 aa2.26□□□□□ -2.05
TRAPPC13-207ENST00000505108 LIMD2Q9BT23 127 aa2.26□□□□□ -2.05
TRAPPC13-207ENST00000505108 STAB1Q9NY15 2570 aa2.26□□□□□ -2.05
TRAPPC13-207ENST00000505108 TENM2Q9NT68 2774 aa2.26□□□□□ -2.05
TRAPPC13-207ENST00000505108 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
TRAPPC13-207ENST00000505108 C20orf166-AS1Q96NR2 134 aa2.25□□□□□ -2.05
TRAPPC13-207ENST00000505108 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
TRAPPC13-207ENST00000505108 DNAH8Q96JB1 4490 aa2.24□□□□□ -2.05
TRAPPC13-207ENST00000505108 CHKB-CPT1BH3BT56 60 aa2.24□□□□□ -2.05
TRAPPC13-207ENST00000505108 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
TRAPPC13-207ENST00000505108 RETNLBQ9BQ08 111 aa2.24□□□□□ -2.05
TRAPPC13-207ENST00000505108 DNAH7Q8WXX0 4024 aa2.24□□□□□ -2.05
TRAPPC13-207ENST00000505108 COL7A1Q02388 2944 aa2.23□□□□□ -2.05
TRAPPC13-207ENST00000505108 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-207ENST00000505108 SPINK7P58062 85 aa2.23□□□□□ -2.05
TRAPPC13-207ENST00000505108 LINC00313P59037 77 aa2.23□□□□□ -2.05
TRAPPC13-207ENST00000505108 SPAG11AQ6PDA7 123 aa2.23□□□□□ -2.05
TRAPPC13-207ENST00000505108 DNAH6Q9C0G6 4158 aa2.22□□□□□ -2.05
TRAPPC13-207ENST00000505108 CSMD3Q7Z407 3707 aa2.21□□□□□ -2.06
TRAPPC13-207ENST00000505108 A6NN06 94 aa2.21□□□□□ -2.06
TRAPPC13-207ENST00000505108 KRTAP10-4P60372 401 aaPredicted RBP2.21□□□□□ -2.06
TRAPPC13-207ENST00000505108 LYSTQ99698 3801 aa2.21□□□□□ -2.06
TRAPPC13-207ENST00000505108 CDC42SE1Q9NRR8 79 aa2.21□□□□□ -2.06
TRAPPC13-207ENST00000505108 PRKDCP78527 4128 aaKnown RBP2.2□□□□□ -2.06
TRAPPC13-207ENST00000505108 ACYP2P14621 99 aa2.2□□□□□ -2.06
TRAPPC13-207ENST00000505108 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
TRAPPC13-207ENST00000505108 C7orf65Q6ZTY9 151 aa2.19□□□□□ -2.06
TRAPPC13-207ENST00000505108 ALMS1Q8TCU4 4167 aa2.19□□□□□ -2.06
TRAPPC13-207ENST00000505108 DNAH11Q96DT5 4516 aa2.19□□□□□ -2.06
TRAPPC13-207ENST00000505108 NOTCH1P46531 2555 aa2.19□□□□□ -2.06
TRAPPC13-207ENST00000505108 SPINK1P00995 79 aa2.18□□□□□ -2.06
TRAPPC13-207ENST00000505108 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
TRAPPC13-207ENST00000505108 RPS29P62273 56 aaKnown RBP2.18□□□□□ -2.06
TRAPPC13-207ENST00000505108 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
TRAPPC13-207ENST00000505108 ATP11AUNQ6ZP68 121 aa2.18□□□□□ -2.06
TRAPPC13-207ENST00000505108 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
TRAPPC13-207ENST00000505108 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
TRAPPC13-207ENST00000505108 NBEAL1Q6ZS30 2694 aa2.16□□□□□ -2.06
TRAPPC13-207ENST00000505108 KRTAP21-3Q3LHN1 58 aa2.16□□□□□ -2.06
TRAPPC13-207ENST00000505108 SPATA8Q6RVD6 105 aa2.16□□□□□ -2.06
TRAPPC13-207ENST00000505108 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
TRAPPC13-207ENST00000505108 KMT2AQ03164 3969 aa2.16□□□□□ -2.06
TRAPPC13-207ENST00000505108 DNAH5Q8TE73 4624 aa2.15□□□□□ -2.06
TRAPPC13-207ENST00000505108 SMR3BP02814 79 aaPredicted RBP2.15□□□□□ -2.07
TRAPPC13-207ENST00000505108 STAB2Q8WWQ8 2551 aa2.15□□□□□ -2.07
TRAPPC13-207ENST00000505108 COL6A5A8TX70 2615 aa2.15□□□□□ -2.07
TRAPPC13-207ENST00000505108 SRRM2Q9UQ35 2752 aaKnown RBP2.15□□□□□ -2.07
TRAPPC13-207ENST00000505108 FRAS1Q86XX4 4008 aa2.14□□□□□ -2.07
TRAPPC13-207ENST00000505108 A0A1B0GU69 56 aa2.14□□□□□ -2.07
TRAPPC13-207ENST00000505108 PKD1P98161 4303 aa2.13□□□□□ -2.07
TRAPPC13-207ENST00000505108 C9orf92A6NGG3 77 aa2.13□□□□□ -2.07
TRAPPC13-207ENST00000505108 HECTD4Q9Y4D8 3996 aa2.13□□□□□ -2.07
TRAPPC13-207ENST00000505108 MGAM2Q2M2H8 2515 aa2.13□□□□□ -2.07
TRAPPC13-207ENST00000505108 MIR22HGQ0VDD5 57 aa2.11□□□□□ -2.07
TRAPPC13-207ENST00000505108 HYDINQ4G0P3 5121 aa2.11□□□□□ -2.07
TRAPPC13-207ENST00000505108 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
TRAPPC13-207ENST00000505108 LRP1BQ9NZR2 4599 aa2.1□□□□□ -2.07
TRAPPC13-207ENST00000505108 H0YAA0 97 aa2.09□□□□□ -2.07
TRAPPC13-207ENST00000505108 UQCR11O14957 56 aa2.09□□□□□ -2.07
TRAPPC13-207ENST00000505108 COX6B2Q6YFQ2 88 aa2.07□□□□□ -2.08
TRAPPC13-207ENST00000505108 PKHD1L1Q86WI1 4243 aa2.07□□□□□ -2.08
TRAPPC13-207ENST00000505108 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
TRAPPC13-207ENST00000505108 MEGF8Q7Z7M0 2845 aa2.05□□□□□ -2.08
TRAPPC13-207ENST00000505108 RPL37P61927 97 aaKnown RBP2.05□□□□□ -2.08
TRAPPC13-207ENST00000505108 H1FX-AS1Q4G0G2 97 aa2.05□□□□□ -2.08
TRAPPC13-207ENST00000505108 PKHD1P08F94 4074 aa2.05□□□□□ -2.08
TRAPPC13-207ENST00000505108 FLG2Q5D862 2391 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC13-207ENST00000505108 MT1HL1P0DM35 61 aa2.04□□□□□ -2.08
TRAPPC13-207ENST00000505108 Q5VSD8 79 aa2.04□□□□□ -2.08
TRAPPC13-207ENST00000505108 DYNC1H1Q14204 4646 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-207ENST00000505108 DNHD1Q96M86 4753 aa2.03□□□□□ -2.08
TRAPPC13-207ENST00000505108 TGP01266 2768 aa2.03□□□□□ -2.09
TRAPPC13-207ENST00000505108 APOBP04114 4563 aaKnown RBP2.03□□□□□ -2.09
TRAPPC13-207ENST00000505108 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
TRAPPC13-207ENST00000505108 CSAG1Q6PB30 78 aa2.02□□□□□ -2.09
TRAPPC13-207ENST00000505108 ROMO1P60602 79 aa2□□□□□ -2.09
TRAPPC13-207ENST00000505108 S4R3F8 94 aa1.98□□□□□ -2.09
TRAPPC13-207ENST00000505108 TNXBP22105 4242 aa1.97□□□□□ -2.09
TRAPPC13-207ENST00000505108 FAT1Q14517 4588 aa1.97□□□□□ -2.09
TRAPPC13-207ENST00000505108 RYR2Q92736 4967 aa1.96□□□□□ -2.1
TRAPPC13-207ENST00000505108 FAT3Q8TDW7 4589 aa1.96□□□□□ -2.1
TRAPPC13-207ENST00000505108 TPRXLQ17RH7 258 aa1.95□□□□□ -2.1
TRAPPC13-207ENST00000505108 LRP1Q07954 4544 aaKnown RBP1.94□□□□□ -2.1
TRAPPC13-207ENST00000505108 CRIPTQ9P021 101 aa1.94□□□□□ -2.1
TRAPPC13-207ENST00000505108 A0A0D9SG42 100 aa1.93□□□□□ -2.1
TRAPPC13-207ENST00000505108 KRTAP4-1Q9BYQ7 146 aa1.93□□□□□ -2.1
TRAPPC13-207ENST00000505108 HSPG2P98160 4391 aa1.93□□□□□ -2.1
TRAPPC13-207ENST00000505108 KRTAP19-2Q3LHN2 52 aa1.91□□□□□ -2.1
TRAPPC13-207ENST00000505108 CRCT1Q9UGL9 99 aa1.91□□□□□ -2.1
TRAPPC13-207ENST00000505108 C10orf95Q9H7T3 257 aa1.89□□□□□ -2.11
TRAPPC13-207ENST00000505108 RYR1P21817 5038 aa1.88□□□□□ -2.11
TRAPPC13-207ENST00000505108 M0QZ58 72 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms