RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 KRTAP21-3Q3LHN1 58 aa8.35□□□□□ -1.07
DDX41-205ENST00000505081 KRTAP10-8P60410 259 aa8.27□□□□□ -1.09
DDX41-205ENST00000505081 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
DDX41-205ENST00000505081 Q5VSD8 79 aa8.24□□□□□ -1.09
DDX41-205ENST00000505081 RYR3Q15413 4870 aa8.23□□□□□ -1.09
DDX41-205ENST00000505081 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
DDX41-205ENST00000505081 KRTAP17-1Q9BYP8 105 aa8.22□□□□□ -1.09
DDX41-205ENST00000505081 XP32Q5T750 250 aa8.21□□□□□ -1.09
DDX41-205ENST00000505081 RYR1P21817 5038 aa8.21□□□□□ -1.09
DDX41-205ENST00000505081 CRIPTQ9P021 101 aa8.21□□□□□ -1.1
DDX41-205ENST00000505081 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
DDX41-205ENST00000505081 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
DDX41-205ENST00000505081 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
DDX41-205ENST00000505081 LPAP08519 4548 aa8.16□□□□□ -1.1
DDX41-205ENST00000505081 KRTAP25-1Q3LHN0 102 aa8.15□□□□□ -1.11
DDX41-205ENST00000505081 A0A0D9SG42 100 aa8.14□□□□□ -1.11
DDX41-205ENST00000505081 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
DDX41-205ENST00000505081 S4R3F8 94 aa8.12□□□□□ -1.11
DDX41-205ENST00000505081 K7ERS5 55 aa8.11□□□□□ -1.11
DDX41-205ENST00000505081 P0C880 135 aa8.08□□□□□ -1.12
DDX41-205ENST00000505081 LRP2P98164 4655 aa8.07□□□□□ -1.12
DDX41-205ENST00000505081 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
DDX41-205ENST00000505081 ROMO1P60602 79 aa7.99□□□□□ -1.13
DDX41-205ENST00000505081 EPPK1P58107 5090 aaKnown RBP7.94□□□□□ -1.14
DDX41-205ENST00000505081 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
DDX41-205ENST00000505081 KRTAP12-2P59991 146 aa7.9□□□□□ -1.15
DDX41-205ENST00000505081 TPRXLQ17RH7 258 aa7.87□□□□□ -1.15
DDX41-205ENST00000505081 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
DDX41-205ENST00000505081 SPINT4Q6UDR6 99 aa7.83□□□□□ -1.16
DDX41-205ENST00000505081 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
DDX41-205ENST00000505081 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
DDX41-205ENST00000505081 H3BS24 57 aa7.74□□□□□ -1.17
DDX41-205ENST00000505081 M0QZ58 72 aa7.66□□□□□ -1.18
DDX41-205ENST00000505081 MUC17Q685J3 4493 aa7.65□□□□□ -1.18
DDX41-205ENST00000505081 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
DDX41-205ENST00000505081 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
DDX41-205ENST00000505081 R4GN34 69 aa7.55□□□□□ -1.2
DDX41-205ENST00000505081 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
DDX41-205ENST00000505081 HERC2O95714 4834 aa7.48□□□□□ -1.21
DDX41-205ENST00000505081 MUC2Q02817 5179 aa7.47□□□□□ -1.21
DDX41-205ENST00000505081 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
DDX41-205ENST00000505081 J3QL48 77 aa7.4□□□□□ -1.23
DDX41-205ENST00000505081 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
DDX41-205ENST00000505081 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
DDX41-205ENST00000505081 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
DDX41-205ENST00000505081 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
DDX41-205ENST00000505081 HERC1Q15751 4861 aa7.2□□□□□ -1.26
DDX41-205ENST00000505081 PCLOQ9Y6V0 5065 aa7.19□□□□□ -1.26
DDX41-205ENST00000505081 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
DDX41-205ENST00000505081 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
DDX41-205ENST00000505081 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
DDX41-205ENST00000505081 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
DDX41-205ENST00000505081 PP632Q6XCG6 107 aa6.96□□□□□ -1.3
DDX41-205ENST00000505081 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
DDX41-205ENST00000505081 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
DDX41-205ENST00000505081 TNP1P09430 55 aa6.88□□□□□ -1.31
DDX41-205ENST00000505081 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
DDX41-205ENST00000505081 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
DDX41-205ENST00000505081 M0R2T5 61 aa6.78□□□□□ -1.32
DDX41-205ENST00000505081 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
DDX41-205ENST00000505081 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
DDX41-205ENST00000505081 MT1HP80294 61 aa6.71□□□□□ -1.33
DDX41-205ENST00000505081 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
DDX41-205ENST00000505081 MT1FP04733 61 aa6.66□□□□□ -1.34
DDX41-205ENST00000505081 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
DDX41-205ENST00000505081 MT2AP02795 61 aa6.64□□□□□ -1.35
DDX41-205ENST00000505081 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
DDX41-205ENST00000505081 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
DDX41-205ENST00000505081 SPRR5A0A1B0GTR4 108 aa6.56□□□□□ -1.36
DDX41-205ENST00000505081 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
DDX41-205ENST00000505081 MT1BP07438 61 aa6.43□□□□□ -1.38
DDX41-205ENST00000505081 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
DDX41-205ENST00000505081 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
DDX41-205ENST00000505081 MT1XP80297 61 aa6.4□□□□□ -1.39
DDX41-205ENST00000505081 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.39
DDX41-205ENST00000505081 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
DDX41-205ENST00000505081 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
DDX41-205ENST00000505081 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
DDX41-205ENST00000505081 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
DDX41-205ENST00000505081 USH2AO75445 5202 aa6.2□□□□□ -1.42
DDX41-205ENST00000505081 KMT2DO14686 5537 aa6.13□□□□□ -1.43
DDX41-205ENST00000505081 LCE2BO14633 110 aa6.07□□□□□ -1.44
DDX41-205ENST00000505081 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
DDX41-205ENST00000505081 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
DDX41-205ENST00000505081 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
DDX41-205ENST00000505081 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
DDX41-205ENST00000505081 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
DDX41-205ENST00000505081 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.48
DDX41-205ENST00000505081 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
DDX41-205ENST00000505081 INE1O15225 51 aa5.75□□□□□ -1.49
DDX41-205ENST00000505081 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
DDX41-205ENST00000505081 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
DDX41-205ENST00000505081 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
DDX41-205ENST00000505081 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
DDX41-205ENST00000505081 MT1LQ93083 61 aa5.53□□□□□ -1.52
DDX41-205ENST00000505081 MT1EP04732 61 aa5.52□□□□□ -1.53
DDX41-205ENST00000505081 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
DDX41-205ENST00000505081 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
DDX41-205ENST00000505081 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
DDX41-205ENST00000505081 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms