RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 MT2AP02795 61 aa3.97□□□□□ -1.77
CDC42SE2-208ENST00000505065 SERP2Q8N6R1 65 aa3.96□□□□□ -1.78
CDC42SE2-208ENST00000505065 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
CDC42SE2-208ENST00000505065 KRTAP9-3Q9BYQ3 159 aa3.94□□□□□ -1.78
CDC42SE2-208ENST00000505065 MT1FP04733 61 aa3.93□□□□□ -1.78
CDC42SE2-208ENST00000505065 MP68P56378 58 aa3.93□□□□□ -1.78
CDC42SE2-208ENST00000505065 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
CDC42SE2-208ENST00000505065 H0YAA0 97 aa3.93□□□□□ -1.78
CDC42SE2-208ENST00000505065 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
CDC42SE2-208ENST00000505065 BRK1Q8WUW1 75 aa3.92□□□□□ -1.78
CDC42SE2-208ENST00000505065 LCA10Q71F78 164 aa3.91□□□□□ -1.78
CDC42SE2-208ENST00000505065 SERP1Q9Y6X1 66 aa3.89□□□□□ -1.79
CDC42SE2-208ENST00000505065 S4R3F8 94 aa3.88□□□□□ -1.79
CDC42SE2-208ENST00000505065 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
CDC42SE2-208ENST00000505065 H7BZZ5 65 aa3.87□□□□□ -1.79
CDC42SE2-208ENST00000505065 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
CDC42SE2-208ENST00000505065 KRTAP3-2Q9BYR7 98 aa3.86□□□□□ -1.79
CDC42SE2-208ENST00000505065 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
CDC42SE2-208ENST00000505065 NDUFC1O43677 76 aa3.83□□□□□ -1.8
CDC42SE2-208ENST00000505065 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
CDC42SE2-208ENST00000505065 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
CDC42SE2-208ENST00000505065 SNURFQ9Y675 71 aa3.83□□□□□ -1.8
CDC42SE2-208ENST00000505065 LCE2BO14633 110 aa3.83□□□□□ -1.8
CDC42SE2-208ENST00000505065 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
CDC42SE2-208ENST00000505065 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
CDC42SE2-208ENST00000505065 M0R2T5 61 aa3.79□□□□□ -1.8
CDC42SE2-208ENST00000505065 CSAG1Q6PB30 78 aa3.79□□□□□ -1.8
CDC42SE2-208ENST00000505065 USH2AO75445 5202 aa3.79□□□□□ -1.8
CDC42SE2-208ENST00000505065 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
CDC42SE2-208ENST00000505065 CRIPTQ9P021 101 aa3.78□□□□□ -1.8
CDC42SE2-208ENST00000505065 ACYP2P14621 99 aa3.77□□□□□ -1.81
CDC42SE2-208ENST00000505065 A8MU10 97 aa3.72□□□□□ -1.81
CDC42SE2-208ENST00000505065 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
CDC42SE2-208ENST00000505065 MT1BP07438 61 aa3.72□□□□□ -1.81
CDC42SE2-208ENST00000505065 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
CDC42SE2-208ENST00000505065 ATP5EP56381 51 aaPredicted RBP3.72□□□□□ -1.81
CDC42SE2-208ENST00000505065 PSPHP1O15172 72 aa3.69□□□□□ -1.82
CDC42SE2-208ENST00000505065 COA5Q86WW8 74 aa3.68□□□□□ -1.82
CDC42SE2-208ENST00000505065 Q1T7F1 81 aa3.67□□□□□ -1.82
CDC42SE2-208ENST00000505065 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
CDC42SE2-208ENST00000505065 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.82
CDC42SE2-208ENST00000505065 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.83
CDC42SE2-208ENST00000505065 P0C880 135 aa3.65□□□□□ -1.83
CDC42SE2-208ENST00000505065 SPTSSBQ8NFR3 76 aa3.65□□□□□ -1.83
CDC42SE2-208ENST00000505065 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
CDC42SE2-208ENST00000505065 Q5VV11 94 aa3.6□□□□□ -1.83
CDC42SE2-208ENST00000505065 A6NN06 94 aa3.6□□□□□ -1.83
CDC42SE2-208ENST00000505065 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
CDC42SE2-208ENST00000505065 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
CDC42SE2-208ENST00000505065 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
CDC42SE2-208ENST00000505065 M0QZ58 72 aa3.56□□□□□ -1.84
CDC42SE2-208ENST00000505065 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
CDC42SE2-208ENST00000505065 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
CDC42SE2-208ENST00000505065 MT1XP80297 61 aa3.53□□□□□ -1.84
CDC42SE2-208ENST00000505065 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
CDC42SE2-208ENST00000505065 A6NED7 52 aa3.5□□□□□ -1.85
CDC42SE2-208ENST00000505065 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
CDC42SE2-208ENST00000505065 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
CDC42SE2-208ENST00000505065 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
CDC42SE2-208ENST00000505065 R4GN34 69 aa3.47□□□□□ -1.85
CDC42SE2-208ENST00000505065 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
CDC42SE2-208ENST00000505065 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
CDC42SE2-208ENST00000505065 A0A1B0GU33 70 aa3.42□□□□□ -1.86
CDC42SE2-208ENST00000505065 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
CDC42SE2-208ENST00000505065 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
CDC42SE2-208ENST00000505065 A0A1B0GU69 56 aa3.4□□□□□ -1.86
CDC42SE2-208ENST00000505065 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
CDC42SE2-208ENST00000505065 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
CDC42SE2-208ENST00000505065 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
CDC42SE2-208ENST00000505065 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
CDC42SE2-208ENST00000505065 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
CDC42SE2-208ENST00000505065 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
CDC42SE2-208ENST00000505065 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
CDC42SE2-208ENST00000505065 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
CDC42SE2-208ENST00000505065 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
CDC42SE2-208ENST00000505065 UQCR11O14957 56 aa3.29□□□□□ -1.88
CDC42SE2-208ENST00000505065 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
CDC42SE2-208ENST00000505065 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
CDC42SE2-208ENST00000505065 ROMO1P60602 79 aa3.23□□□□□ -1.89
CDC42SE2-208ENST00000505065 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
CDC42SE2-208ENST00000505065 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
CDC42SE2-208ENST00000505065 KMT2DO14686 5537 aa3.2□□□□□ -1.9
CDC42SE2-208ENST00000505065 A0A0D9SG42 100 aa3.2□□□□□ -1.9
CDC42SE2-208ENST00000505065 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
CDC42SE2-208ENST00000505065 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
CDC42SE2-208ENST00000505065 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-208ENST00000505065 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
CDC42SE2-208ENST00000505065 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
CDC42SE2-208ENST00000505065 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
CDC42SE2-208ENST00000505065 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
CDC42SE2-208ENST00000505065 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
CDC42SE2-208ENST00000505065 CAMK2N1Q7Z7J9 78 aa3.13□□□□□ -1.91
CDC42SE2-208ENST00000505065 NEBP20929 6669 aa3.13□□□□□ -1.91
CDC42SE2-208ENST00000505065 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
CDC42SE2-208ENST00000505065 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
CDC42SE2-208ENST00000505065 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
CDC42SE2-208ENST00000505065 MT1EP04732 61 aa3.11□□□□□ -1.91
CDC42SE2-208ENST00000505065 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
CDC42SE2-208ENST00000505065 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
CDC42SE2-208ENST00000505065 TNP1P09430 55 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms