RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ZNF469Q96JG9 3925 aaPredicted RBP2.27□□□□□ -2.05
LINC02397-201ENST00000504409 ANK3Q12955 4377 aaKnown RBP2.27□□□□□ -2.05
LINC02397-201ENST00000504409 CFAP47Q6ZTR5 3102 aa2.27□□□□□ -2.05
LINC02397-201ENST00000504409 FBN1P35555 2871 aaKnown RBP2.26□□□□□ -2.05
LINC02397-201ENST00000504409 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
LINC02397-201ENST00000504409 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
LINC02397-201ENST00000504409 VPS13BQ7Z7G8 4022 aa2.25□□□□□ -2.05
LINC02397-201ENST00000504409 SZT2Q5T011 3432 aa2.25□□□□□ -2.05
LINC02397-201ENST00000504409 PKD1P98161 4303 aa2.25□□□□□ -2.05
LINC02397-201ENST00000504409 MYO15AQ9UKN7 3530 aa2.24□□□□□ -2.05
LINC02397-201ENST00000504409 KRTAP19-8Q3LI54 63 aa2.24□□□□□ -2.05
LINC02397-201ENST00000504409 CUBNO60494 3623 aa2.23□□□□□ -2.05
LINC02397-201ENST00000504409 LAMA5O15230 3695 aa2.23□□□□□ -2.05
LINC02397-201ENST00000504409 SMG1Q96Q15 3661 aaKnown RBP2.21□□□□□ -2.06
LINC02397-201ENST00000504409 CELSR3Q9NYQ7 3312 aa2.2□□□□□ -2.06
LINC02397-201ENST00000504409 KRTAP10-5P60370 271 aa2.2□□□□□ -2.06
LINC02397-201ENST00000504409 DMDP11532 3685 aa2.2□□□□□ -2.06
LINC02397-201ENST00000504409 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
LINC02397-201ENST00000504409 KMT2AQ03164 3969 aa2.19□□□□□ -2.06
LINC02397-201ENST00000504409 DNAH11Q96DT5 4516 aa2.17□□□□□ -2.06
LINC02397-201ENST00000504409 DCHS1Q96JQ0 3298 aa2.16□□□□□ -2.06
LINC02397-201ENST00000504409 WDFY3Q8IZQ1 3526 aa2.15□□□□□ -2.06
LINC02397-201ENST00000504409 HSPG2P98160 4391 aa2.15□□□□□ -2.07
LINC02397-201ENST00000504409 LOC400499M0QZD8 3231 aa2.15□□□□□ -2.07
LINC02397-201ENST00000504409 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
LINC02397-201ENST00000504409 DNAH17Q9UFH2 4485 aa2.13□□□□□ -2.07
LINC02397-201ENST00000504409 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
LINC02397-201ENST00000504409 DNAH8Q96JB1 4490 aa2.11□□□□□ -2.07
LINC02397-201ENST00000504409 SVEP1Q4LDE5 3571 aa2.11□□□□□ -2.07
LINC02397-201ENST00000504409 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
LINC02397-201ENST00000504409 KRTAP10-7P60409 375 aaPredicted RBP2.1□□□□□ -2.07
LINC02397-201ENST00000504409 MT1EP04732 61 aa2.1□□□□□ -2.07
LINC02397-201ENST00000504409 SPEGQ15772 3267 aa2.1□□□□□ -2.07
LINC02397-201ENST00000504409 PKHD1L1Q86WI1 4243 aa2.1□□□□□ -2.07
LINC02397-201ENST00000504409 MT1LQ93083 61 aa2.09□□□□□ -2.07
LINC02397-201ENST00000504409 KRTAP4-5Q9BYR2 181 aa2.09□□□□□ -2.07
LINC02397-201ENST00000504409 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.07
LINC02397-201ENST00000504409 ASPMQ8IZT6 3477 aa2.09□□□□□ -2.07
LINC02397-201ENST00000504409 CSMD1Q96PZ7 3565 aa2.07□□□□□ -2.08
LINC02397-201ENST00000504409 DNAH5Q8TE73 4624 aa2.07□□□□□ -2.08
LINC02397-201ENST00000504409 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
LINC02397-201ENST00000504409 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
LINC02397-201ENST00000504409 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
LINC02397-201ENST00000504409 DNAH9Q9NYC9 4486 aa2.06□□□□□ -2.08
LINC02397-201ENST00000504409 SPRR2AP35326 72 aa2.06□□□□□ -2.08
LINC02397-201ENST00000504409 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
LINC02397-201ENST00000504409 MT1AP04731 61 aa2.05□□□□□ -2.08
LINC02397-201ENST00000504409 MT2AP02795 61 aa2.05□□□□□ -2.08
LINC02397-201ENST00000504409 MT1GP13640 62 aa2.04□□□□□ -2.08
LINC02397-201ENST00000504409 SPRR2BP35325 72 aa2.03□□□□□ -2.08
LINC02397-201ENST00000504409 MT1HP80294 61 aa2.03□□□□□ -2.08
LINC02397-201ENST00000504409 KRTAP19-1Q8IUB9 90 aa2.02□□□□□ -2.09
LINC02397-201ENST00000504409 SACSQ9NZJ4 4579 aa2.02□□□□□ -2.09
LINC02397-201ENST00000504409 MYCBP2O75592 4640 aa2.02□□□□□ -2.09
LINC02397-201ENST00000504409 LRP1Q07954 4544 aaKnown RBP2.02□□□□□ -2.09
LINC02397-201ENST00000504409 MT1XP80297 61 aa2.01□□□□□ -2.09
LINC02397-201ENST00000504409 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
LINC02397-201ENST00000504409 RELNP78509 3460 aa2□□□□□ -2.09
LINC02397-201ENST00000504409 TNXBP22105 4242 aa2□□□□□ -2.09
LINC02397-201ENST00000504409 MT1FP04733 61 aa1.99□□□□□ -2.09
LINC02397-201ENST00000504409 MUC3AQ02505 3323 aa1.97□□□□□ -2.09
LINC02397-201ENST00000504409 FAT3Q8TDW7 4589 aa1.94□□□□□ -2.1
LINC02397-201ENST00000504409 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
LINC02397-201ENST00000504409 PLECQ15149 4684 aaKnown RBP1.9□□□□□ -2.11
LINC02397-201ENST00000504409 CSMD3Q7Z407 3707 aa1.9□□□□□ -2.11
LINC02397-201ENST00000504409 APOBP04114 4563 aaKnown RBP1.89□□□□□ -2.11
LINC02397-201ENST00000504409 KRTAP4-1Q9BYQ7 146 aa1.88□□□□□ -2.11
LINC02397-201ENST00000504409 MT1BP07438 61 aa1.88□□□□□ -2.11
LINC02397-201ENST00000504409 MT1MQ8N339 61 aa1.87□□□□□ -2.11
LINC02397-201ENST00000504409 KRTAP19-3Q7Z4W3 81 aa1.86□□□□□ -2.11
LINC02397-201ENST00000504409 CSMD2Q7Z408 3487 aa1.86□□□□□ -2.11
LINC02397-201ENST00000504409 STARD9Q9P2P6 4700 aa1.86□□□□□ -2.11
LINC02397-201ENST00000504409 LRP1BQ9NZR2 4599 aa1.86□□□□□ -2.11
LINC02397-201ENST00000504409 LCE2DQ5TA82 110 aaPredicted RBP1.84□□□□□ -2.12
LINC02397-201ENST00000504409 SPRR2DP22532 72 aa1.83□□□□□ -2.12
LINC02397-201ENST00000504409 SPRR2EP22531 72 aa1.83□□□□□ -2.12
LINC02397-201ENST00000504409 PRM1P04553 51 aa1.83□□□□□ -2.12
LINC02397-201ENST00000504409 FAT1Q14517 4588 aa1.82□□□□□ -2.12
LINC02397-201ENST00000504409 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
LINC02397-201ENST00000504409 LCE3BQ5TA77 95 aa1.82□□□□□ -2.12
LINC02397-201ENST00000504409 KRTAP9-8Q9BYQ0 159 aa1.81□□□□□ -2.12
LINC02397-201ENST00000504409 DNHD1Q96M86 4753 aa1.81□□□□□ -2.12
LINC02397-201ENST00000504409 HERC1Q15751 4861 aa1.79□□□□□ -2.12
LINC02397-201ENST00000504409 KRTAP9-3Q9BYQ3 159 aa1.78□□□□□ -2.12
LINC02397-201ENST00000504409 KRTAP17-1Q9BYP8 105 aa1.78□□□□□ -2.12
LINC02397-201ENST00000504409 MUC17Q685J3 4493 aa1.78□□□□□ -2.13
LINC02397-201ENST00000504409 LCE2CQ5TA81 110 aa1.77□□□□□ -2.13
LINC02397-201ENST00000504409 KRTAP19-2Q3LHN2 52 aa1.76□□□□□ -2.13
LINC02397-201ENST00000504409 LCE2BO14633 110 aa1.75□□□□□ -2.13
LINC02397-201ENST00000504409 KRTAP19-6Q3LI70 58 aa1.69□□□□□ -2.14
LINC02397-201ENST00000504409 LCE1AQ5T7P2 110 aa1.68□□□□□ -2.14
LINC02397-201ENST00000504409 KRTAP9-2Q9BYQ4 174 aa1.68□□□□□ -2.14
LINC02397-201ENST00000504409 KRTAP9-6A0A140TA67 174 aa1.67□□□□□ -2.14
LINC02397-201ENST00000504409 LCE2AQ5TA79 106 aaPredicted RBP1.66□□□□□ -2.14
LINC02397-201ENST00000504409 KRTAP19-7Q3SYF9 63 aa1.66□□□□□ -2.14
LINC02397-201ENST00000504409 KRTAP2-2Q9BYT5 123 aa1.63□□□□□ -2.15
LINC02397-201ENST00000504409 KRTAP9-6A8MVA2 160 aa1.63□□□□□ -2.15
LINC02397-201ENST00000504409 RYR2Q92736 4967 aa1.63□□□□□ -2.15
LINC02397-201ENST00000504409 LPAP08519 4548 aa1.62□□□□□ -2.15
LINC02397-201ENST00000504409 RYR1P21817 5038 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms