RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 SMG1Q96Q15 3661 aaKnown RBP0.26□□□□□ -2.37
COPS4-203ENST00000504274 HTN3P15516 51 aa0.26□□□□□ -2.37
COPS4-203ENST00000504274 AKAP9Q99996 3911 aa0.26□□□□□ -2.37
COPS4-203ENST00000504274 ITPR1Q14643 2758 aa0.26□□□□□ -2.37
COPS4-203ENST00000504274 LRBAP50851 2863 aa0.25□□□□□ -2.37
COPS4-203ENST00000504274 MXRA5Q9NR99 2828 aa0.25□□□□□ -2.37
COPS4-203ENST00000504274 ANKHD1Q8IWZ3 2542 aaKnown RBP0.25□□□□□ -2.37
COPS4-203ENST00000504274 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
COPS4-203ENST00000504274 SPART-AS1P0CW21 52 aa0.25□□□□□ -2.37
COPS4-203ENST00000504274 COL6A3P12111 3177 aa0.25□□□□□ -2.37
COPS4-203ENST00000504274 CRYBG3Q68DQ2 2970 aa0.25□□□□□ -2.37
COPS4-203ENST00000504274 UTP20O75691 2785 aaKnown RBP0.25□□□□□ -2.37
COPS4-203ENST00000504274 TEX15Q9BXT5 2789 aa0.25□□□□□ -2.37
COPS4-203ENST00000504274 APOBP04114 4563 aaKnown RBP0.25□□□□□ -2.37
COPS4-203ENST00000504274 CENPEQ02224 2701 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 CFAP46Q8IYW2 2715 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 H3BNG1 76 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 DEFB4AO15263 64 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 DNAH9Q9NYC9 4486 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 FRYQ5TBA9 3013 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 MGAQ8IWI9 3026 aa0.24□□□□□ -2.37
COPS4-203ENST00000504274 TRRAPQ9Y4A5 3859 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 NBEAL1Q6ZS30 2694 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 LAMA5O15230 3695 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 TRIOO75962 3097 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 FRYLO94915 3013 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 C9orf92A6NGG3 77 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 M0QZ58 72 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 LINC01556Q5JQF7 62 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 DEFB124Q8NES8 71 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 NBEAL2Q6ZNJ1 2754 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 ITPR2Q14571 2701 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 COL6A5A8TX70 2615 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 WDFY3Q8IZQ1 3526 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 USP9YO00507 2555 aaPredicted RBP0.23□□□□□ -2.37
COPS4-203ENST00000504274 DNAH6Q9C0G6 4158 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 TGP01266 2768 aa0.23□□□□□ -2.37
COPS4-203ENST00000504274 VPS13DQ5THJ4 4388 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 USP34Q70CQ2 3546 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 VPS13CQ709C8 3753 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 TNP1P09430 55 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 CFAP54Q96N23 3096 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 SRCAPQ6ZRS2 3230 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 DNAH14Q0VDD8 3507 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 ZANQ9Y493 2812 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 CEP350Q5VT06 3117 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 DNAH12Q6ZR08 3092 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 BOD1L1Q8NFC6 3051 aa0.22□□□□□ -2.37
COPS4-203ENST00000504274 DMXL2Q8TDJ6 3036 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 ANKRD11Q6UB99 2663 aaPredicted RBP0.21□□□□□ -2.38
COPS4-203ENST00000504274 TEP1Q99973 2627 aaKnown RBP0.21□□□□□ -2.38
COPS4-203ENST00000504274 MYO15AQ9UKN7 3530 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 DYNC2H1Q8NCM8 4307 aaKnown RBP0.21□□□□□ -2.38
COPS4-203ENST00000504274 FAT3Q8TDW7 4589 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 HIVEP1P15822 2718 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 CSMD1Q96PZ7 3565 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
COPS4-203ENST00000504274 COL12A1Q99715 3063 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 CMYA5Q8N3K9 4069 aa0.21□□□□□ -2.38
COPS4-203ENST00000504274 DMBT1Q9UGM3 2413 aaPredicted RBP0.21□□□□□ -2.38
COPS4-203ENST00000504274 WDFY4Q6ZS81 3184 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 CFAP47Q6ZTR5 3102 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 DNAH1Q9P2D7 4330 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
COPS4-203ENST00000504274 DNAH7Q8WXX0 4024 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 RELNP78509 3460 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 ASPMQ8IZT6 3477 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 UTRNP46939 3433 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 BRCA2P51587 3418 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 C5orf42Q9H799 3197 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 SPRR2AP35326 72 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 RPS29P62273 56 aaKnown RBP0.2□□□□□ -2.38
COPS4-203ENST00000504274 LAMA2P24043 3122 aaKnown RBP0.2□□□□□ -2.38
COPS4-203ENST00000504274 HTTP42858 3142 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 DNAH17Q9UFH2 4485 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 FLNAP21333 2647 aaKnown RBP0.2□□□□□ -2.38
COPS4-203ENST00000504274 LAMA1P25391 3075 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 ATMQ13315 3056 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 DNAH10Q8IVF4 4471 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 LRP2P98164 4655 aa0.2□□□□□ -2.38
COPS4-203ENST00000504274 LOC400499M0QZD8 3231 aa0.19□□□□□ -2.38
COPS4-203ENST00000504274 RANBP2P49792 3224 aaKnown RBP0.19□□□□□ -2.38
COPS4-203ENST00000504274 EP400Q96L91 3159 aa0.19□□□□□ -2.38
COPS4-203ENST00000504274 SPEGQ15772 3267 aa0.19□□□□□ -2.38
COPS4-203ENST00000504274 ADGRG4Q8IZF6 3080 aa0.19□□□□□ -2.38
COPS4-203ENST00000504274 PCNTO95613 3336 aa0.19□□□□□ -2.38
COPS4-203ENST00000504274 GOLGB1Q14789 3259 aaKnown RBP0.19□□□□□ -2.38
COPS4-203ENST00000504274 CCDC168Q8NDH2 2452 aa0.19□□□□□ -2.38
COPS4-203ENST00000504274 CEP295Q9C0D2 2601 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 DCHS1Q96JQ0 3298 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 DNAH8Q96JB1 4490 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 VCANP13611 3396 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 CSMD2Q7Z408 3487 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 SZT2Q5T011 3432 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 FREM2Q5SZK8 3169 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 CELSR3Q9NYQ7 3312 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 ACACAQ13085 2346 aa0.18□□□□□ -2.38
COPS4-203ENST00000504274 MKI67P46013 3256 aaKnown RBP0.18□□□□□ -2.38
COPS4-203ENST00000504274 XIRP2A4UGR9 3374 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms