RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
SH3TC2-204ENST00000504091 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
SH3TC2-204ENST00000504091 S4R3F8 94 aa3.68□□□□□ -1.82
SH3TC2-204ENST00000504091 DNAH17Q9UFH2 4485 aa3.67□□□□□ -1.82
SH3TC2-204ENST00000504091 KRTAP10-2P60368 255 aa3.66□□□□□ -1.82
SH3TC2-204ENST00000504091 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
SH3TC2-204ENST00000504091 DNAH10Q8IVF4 4471 aa3.65□□□□□ -1.83
SH3TC2-204ENST00000504091 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
SH3TC2-204ENST00000504091 KRTAP10-1P60331 282 aa3.63□□□□□ -1.83
SH3TC2-204ENST00000504091 HUWE1Q7Z6Z7 4374 aaKnown RBP3.62□□□□□ -1.83
SH3TC2-204ENST00000504091 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
SH3TC2-204ENST00000504091 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
SH3TC2-204ENST00000504091 PLECQ15149 4684 aaKnown RBP3.6□□□□□ -1.83
SH3TC2-204ENST00000504091 DNAH11Q96DT5 4516 aa3.6□□□□□ -1.83
SH3TC2-204ENST00000504091 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
SH3TC2-204ENST00000504091 KMT2AQ03164 3969 aa3.59□□□□□ -1.83
SH3TC2-204ENST00000504091 KRTAP13-4Q3LI77 160 aa3.58□□□□□ -1.84
SH3TC2-204ENST00000504091 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
SH3TC2-204ENST00000504091 DNAH2Q9P225 4427 aa3.58□□□□□ -1.84
SH3TC2-204ENST00000504091 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
SH3TC2-204ENST00000504091 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
SH3TC2-204ENST00000504091 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
SH3TC2-204ENST00000504091 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
SH3TC2-204ENST00000504091 PKHD1P08F94 4074 aa3.54□□□□□ -1.84
SH3TC2-204ENST00000504091 M0QZ58 72 aa3.54□□□□□ -1.84
SH3TC2-204ENST00000504091 VPS13DQ5THJ4 4388 aa3.54□□□□□ -1.84
SH3TC2-204ENST00000504091 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
SH3TC2-204ENST00000504091 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
SH3TC2-204ENST00000504091 R4GN34 69 aa3.52□□□□□ -1.85
SH3TC2-204ENST00000504091 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
SH3TC2-204ENST00000504091 KRTAP12-1P59990 96 aa3.51□□□□□ -1.85
SH3TC2-204ENST00000504091 XP32Q5T750 250 aa3.48□□□□□ -1.85
SH3TC2-204ENST00000504091 RYR1P21817 5038 aa3.48□□□□□ -1.85
SH3TC2-204ENST00000504091 DNAH8Q96JB1 4490 aa3.47□□□□□ -1.85
SH3TC2-204ENST00000504091 STARD9Q9P2P6 4700 aa3.47□□□□□ -1.85
SH3TC2-204ENST00000504091 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
SH3TC2-204ENST00000504091 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.86
SH3TC2-204ENST00000504091 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
SH3TC2-204ENST00000504091 PKD1P98161 4303 aa3.45□□□□□ -1.86
SH3TC2-204ENST00000504091 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
SH3TC2-204ENST00000504091 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
SH3TC2-204ENST00000504091 HSPG2P98160 4391 aa3.38□□□□□ -1.87
SH3TC2-204ENST00000504091 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
SH3TC2-204ENST00000504091 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
SH3TC2-204ENST00000504091 DNAH5Q8TE73 4624 aa3.32□□□□□ -1.88
SH3TC2-204ENST00000504091 APOBP04114 4563 aaKnown RBP3.31□□□□□ -1.88
SH3TC2-204ENST00000504091 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
SH3TC2-204ENST00000504091 FAT1Q14517 4588 aa3.27□□□□□ -1.89
SH3TC2-204ENST00000504091 TNP1P09430 55 aa3.27□□□□□ -1.89
SH3TC2-204ENST00000504091 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
SH3TC2-204ENST00000504091 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
SH3TC2-204ENST00000504091 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
SH3TC2-204ENST00000504091 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
SH3TC2-204ENST00000504091 TNXBP22105 4242 aa3.21□□□□□ -1.9
SH3TC2-204ENST00000504091 HMCN2Q8NDA2 5059 aa3.2□□□□□ -1.9
SH3TC2-204ENST00000504091 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
SH3TC2-204ENST00000504091 PRO2289Q9P1D8 64 aa3.19□□□□□ -1.9
SH3TC2-204ENST00000504091 MT1HL1P0DM35 61 aa3.17□□□□□ -1.9
SH3TC2-204ENST00000504091 HERC1Q15751 4861 aa3.17□□□□□ -1.9
SH3TC2-204ENST00000504091 KRTAP9-7A8MTY7 169 aa3.16□□□□□ -1.9
SH3TC2-204ENST00000504091 LCE5AQ5TCM9 118 aa3.16□□□□□ -1.9
SH3TC2-204ENST00000504091 KRTAP10-10P60014 251 aa3.13□□□□□ -1.91
SH3TC2-204ENST00000504091 INE1O15225 51 aa3.11□□□□□ -1.91
SH3TC2-204ENST00000504091 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
SH3TC2-204ENST00000504091 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
SH3TC2-204ENST00000504091 LOC100996750A0A140TA64 210 aa3.09□□□□□ -1.91
SH3TC2-204ENST00000504091 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
SH3TC2-204ENST00000504091 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
SH3TC2-204ENST00000504091 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
SH3TC2-204ENST00000504091 FAT4Q6V0I7 4981 aa3.01□□□□□ -1.93
SH3TC2-204ENST00000504091 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
SH3TC2-204ENST00000504091 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
SH3TC2-204ENST00000504091 LPAP08519 4548 aa2.98□□□□□ -1.93
SH3TC2-204ENST00000504091 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
SH3TC2-204ENST00000504091 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SH3TC2-204ENST00000504091 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
SH3TC2-204ENST00000504091 UBR4Q5T4S7 5183 aa2.93□□□□□ -1.94
SH3TC2-204ENST00000504091 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
SH3TC2-204ENST00000504091 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
SH3TC2-204ENST00000504091 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
SH3TC2-204ENST00000504091 LRP2P98164 4655 aa2.87□□□□□ -1.95
SH3TC2-204ENST00000504091 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
SH3TC2-204ENST00000504091 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
SH3TC2-204ENST00000504091 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
SH3TC2-204ENST00000504091 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
SH3TC2-204ENST00000504091 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
SH3TC2-204ENST00000504091 KRTAP19-1Q8IUB9 90 aa2.78□□□□□ -1.96
SH3TC2-204ENST00000504091 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
SH3TC2-204ENST00000504091 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
SH3TC2-204ENST00000504091 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
SH3TC2-204ENST00000504091 KRTAP8-1Q8IUC2 63 aa2.74□□□□□ -1.97
SH3TC2-204ENST00000504091 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SH3TC2-204ENST00000504091 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
SH3TC2-204ENST00000504091 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
SH3TC2-204ENST00000504091 MT1HP80294 61 aa2.7□□□□□ -1.98
SH3TC2-204ENST00000504091 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
SH3TC2-204ENST00000504091 SPRR2EP22531 72 aa2.7□□□□□ -1.98
SH3TC2-204ENST00000504091 SPRR2BP35325 72 aa2.7□□□□□ -1.98
SH3TC2-204ENST00000504091 SPRR2AP35326 72 aa2.7□□□□□ -1.98
SH3TC2-204ENST00000504091 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms