RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 SPCS1Q9Y6A9 102 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 TRBV20-1A0A075B6N2 111 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 RBM3P98179 157 aaKnown RBP1.69□□□□□ -2.14
UBE3D-205ENST00000503942 TPRXLQ17RH7 258 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 LYRM7Q5U5X0 104 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 Q6Q795 121 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 FP248Q71RG6 208 aaPredicted RBP1.69□□□□□ -2.14
UBE3D-205ENST00000503942 TEN1Q86WV5 123 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 VPS25Q9BRG1 176 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 C14orf132Q9NPU4 83 aa1.69□□□□□ -2.14
UBE3D-205ENST00000503942 MUC2Q02817 5179 aa1.68□□□□□ -2.14
UBE3D-205ENST00000503942 K7EP34 96 aa1.68□□□□□ -2.14
UBE3D-205ENST00000503942 ASB16-AS1Q495Z4 193 aa1.68□□□□□ -2.14
UBE3D-205ENST00000503942 Q6ZQT0 140 aa1.68□□□□□ -2.14
UBE3D-205ENST00000503942 OBSCN-AS1Q96MR7 158 aa1.68□□□□□ -2.14
UBE3D-205ENST00000503942 H3BT86 120 aa1.67□□□□□ -2.14
UBE3D-205ENST00000503942 PCOTHQ58A44 107 aa1.67□□□□□ -2.14
UBE3D-205ENST00000503942 DSCR8Q96T75 97 aa1.67□□□□□ -2.14
UBE3D-205ENST00000503942 LINC00472Q9H8W2 130 aa1.67□□□□□ -2.14
UBE3D-205ENST00000503942 LOC110117498A0A087WWA1 95 aa1.66□□□□□ -2.14
UBE3D-205ENST00000503942 A0A1B0GV90 55 aa1.66□□□□□ -2.14
UBE3D-205ENST00000503942 JMJD7-PLA2G4BH0Y9G9 81 aa1.66□□□□□ -2.14
UBE3D-205ENST00000503942 SIGMAR1Q99720 223 aa1.66□□□□□ -2.14
UBE3D-205ENST00000503942 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
UBE3D-205ENST00000503942 ETDBQ3ZM63 59 aa1.65□□□□□ -2.15
UBE3D-205ENST00000503942 GTF2H5Q6ZYL4 71 aa1.65□□□□□ -2.15
UBE3D-205ENST00000503942 SS18L2Q9UHA2 77 aa1.65□□□□□ -2.15
UBE3D-205ENST00000503942 IGKV3D-7A0A0C4DH55 119 aa1.64□□□□□ -2.15
UBE3D-205ENST00000503942 RPL37P61927 97 aaKnown RBP1.64□□□□□ -2.15
UBE3D-205ENST00000503942 NREPQ16612 68 aa1.64□□□□□ -2.15
UBE3D-205ENST00000503942 F8W1H4 67 aa1.63□□□□□ -2.15
UBE3D-205ENST00000503942 PDE6GP18545 87 aa1.63□□□□□ -2.15
UBE3D-205ENST00000503942 LINC00846Q9NV44 126 aa1.63□□□□□ -2.15
UBE3D-205ENST00000503942 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
UBE3D-205ENST00000503942 K7EQZ3 153 aa1.62□□□□□ -2.15
UBE3D-205ENST00000503942 KRTAP19-2Q3LHN2 52 aa1.62□□□□□ -2.15
UBE3D-205ENST00000503942 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
UBE3D-205ENST00000503942 PRR15Q8IV56 129 aa1.62□□□□□ -2.15
UBE3D-205ENST00000503942 MMP24-AS1A0A0U1RRL7 71 aa1.61□□□□□ -2.15
UBE3D-205ENST00000503942 A0A1B0GW54 56 aa1.61□□□□□ -2.15
UBE3D-205ENST00000503942 H3BPC8 53 aa1.61□□□□□ -2.15
UBE3D-205ENST00000503942 J3KT08 172 aa1.6□□□□□ -2.15
UBE3D-205ENST00000503942 NDUFB1O75438 58 aa1.6□□□□□ -2.15
UBE3D-205ENST00000503942 WFDC13Q8IUB5 93 aa1.6□□□□□ -2.15
UBE3D-205ENST00000503942 hDV103S1A0JD37 113 aa1.59□□□□□ -2.15
UBE3D-205ENST00000503942 ATP11AUNQ6ZP68 121 aa1.59□□□□□ -2.15
UBE3D-205ENST00000503942 UBL5Q9BZL1 73 aa1.59□□□□□ -2.15
UBE3D-205ENST00000503942 TMEM254Q8TBM7 123 aa1.58□□□□□ -2.16
UBE3D-205ENST00000503942 MRPL34Q9BQ48 92 aaKnown RBP1.58□□□□□ -2.16
UBE3D-205ENST00000503942 HCG22E2RYF7 251 aa1.57□□□□□ -2.16
UBE3D-205ENST00000503942 MT1HP80294 61 aa1.57□□□□□ -2.16
UBE3D-205ENST00000503942 CASC2Q6XLA1 102 aa1.57□□□□□ -2.16
UBE3D-205ENST00000503942 PRO2289Q9P1D8 64 aa1.57□□□□□ -2.16
UBE3D-205ENST00000503942 A0A087WVE0 104 aa1.56□□□□□ -2.16
UBE3D-205ENST00000503942 ACYP1P07311 99 aa1.56□□□□□ -2.16
UBE3D-205ENST00000503942 SPINK7P58062 85 aa1.56□□□□□ -2.16
UBE3D-205ENST00000503942 COX6B2Q6YFQ2 88 aa1.55□□□□□ -2.16
UBE3D-205ENST00000503942 LINC00643Q86TS7 51 aa1.55□□□□□ -2.16
UBE3D-205ENST00000503942 HIST1H4AP62805 103 aaKnown RBP1.54□□□□□ -2.16
UBE3D-205ENST00000503942 FAM236DA0A1B0GTK5 79 aa1.53□□□□□ -2.16
UBE3D-205ENST00000503942 MT-ATP8P03928 68 aa1.53□□□□□ -2.16
UBE3D-205ENST00000503942 FAM236CP0DP71 79 aa1.53□□□□□ -2.16
UBE3D-205ENST00000503942 J3QR89 54 aa1.52□□□□□ -2.17
UBE3D-205ENST00000503942 M0R2T5 61 aa1.52□□□□□ -2.17
UBE3D-205ENST00000503942 ATP5EP2Q5VTU8 51 aa1.52□□□□□ -2.17
UBE3D-205ENST00000503942 C7orf65Q6ZTY9 151 aa1.51□□□□□ -2.17
UBE3D-205ENST00000503942 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
UBE3D-205ENST00000503942 H0Y9P7 68 aa1.5□□□□□ -2.17
UBE3D-205ENST00000503942 K7ERU9 68 aa1.5□□□□□ -2.17
UBE3D-205ENST00000503942 CYP4F30PQ9H0H9 118 aa1.5□□□□□ -2.17
UBE3D-205ENST00000503942 TP53AIP1Q9HCN2 124 aa1.5□□□□□ -2.17
UBE3D-205ENST00000503942 UQCRQO14949 82 aa1.49□□□□□ -2.17
UBE3D-205ENST00000503942 MT2AP02795 61 aa1.49□□□□□ -2.17
UBE3D-205ENST00000503942 MT1FP04733 61 aa1.49□□□□□ -2.17
UBE3D-205ENST00000503942 KLKP1Q107X0 134 aa1.49□□□□□ -2.17
UBE3D-205ENST00000503942 H1FX-AS1Q4G0G2 97 aa1.49□□□□□ -2.17
UBE3D-205ENST00000503942 FAM236AA0A1B0GUQ0 79 aa1.48□□□□□ -2.17
UBE3D-205ENST00000503942 FAM236BA0A1B0GV22 79 aa1.48□□□□□ -2.17
UBE3D-205ENST00000503942 LINC00208Q96KT6 92 aa1.48□□□□□ -2.17
UBE3D-205ENST00000503942 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
UBE3D-205ENST00000503942 SCGB1A1P11684 91 aa1.47□□□□□ -2.17
UBE3D-205ENST00000503942 IMUPQ9GZP8 106 aa1.47□□□□□ -2.17
UBE3D-205ENST00000503942 ATOX1O00244 68 aa1.46□□□□□ -2.18
UBE3D-205ENST00000503942 LCA10Q71F78 164 aa1.46□□□□□ -2.18
UBE3D-205ENST00000503942 TRAV7A0A075B6U4 112 aa1.45□□□□□ -2.18
UBE3D-205ENST00000503942 A8MUN3 132 aa1.45□□□□□ -2.18
UBE3D-205ENST00000503942 SNURFQ9Y675 71 aa1.45□□□□□ -2.18
UBE3D-205ENST00000503942 S4R3F8 94 aa1.45□□□□□ -2.18
UBE3D-205ENST00000503942 USH2AO75445 5202 aa1.45□□□□□ -2.18
UBE3D-205ENST00000503942 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
UBE3D-205ENST00000503942 CSAG1Q6PB30 78 aa1.42□□□□□ -2.18
UBE3D-205ENST00000503942 C20orf197Q8N268 126 aa1.42□□□□□ -2.18
UBE3D-205ENST00000503942 SMIM20Q8N5G0 67 aa1.42□□□□□ -2.18
UBE3D-205ENST00000503942 SERP2Q8N6R1 65 aa1.42□□□□□ -2.18
UBE3D-205ENST00000503942 CYSTM1Q9H1C7 97 aa1.42□□□□□ -2.18
UBE3D-205ENST00000503942 TMEM258P61165 79 aa1.41□□□□□ -2.18
UBE3D-205ENST00000503942 COA5Q86WW8 74 aa1.41□□□□□ -2.18
UBE3D-205ENST00000503942 DMAC1Q96GE9 116 aa1.41□□□□□ -2.18
UBE3D-205ENST00000503942 FSIP2Q5CZC0 6907 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms