RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 CENPEQ02224 2701 aa2.6□□□□□ -1.99
NDFIP1-202ENST00000503388 TPRXLQ17RH7 258 aa2.6□□□□□ -1.99
NDFIP1-202ENST00000503388 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
NDFIP1-202ENST00000503388 TEX15Q9BXT5 2789 aa2.6□□□□□ -1.99
NDFIP1-202ENST00000503388 HIVEP1P15822 2718 aa2.59□□□□□ -1.99
NDFIP1-202ENST00000503388 KRTAP16-1A8MUX0 517 aa2.59□□□□□ -1.99
NDFIP1-202ENST00000503388 DCHS2Q6V1P9 2916 aa2.59□□□□□ -1.99
NDFIP1-202ENST00000503388 ADM2Q7Z4H4 148 aa2.59□□□□□ -2
NDFIP1-202ENST00000503388 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -2
NDFIP1-202ENST00000503388 PLAC4Q8WY50 150 aa2.59□□□□□ -2
NDFIP1-202ENST00000503388 BOD1L1Q8NFC6 3051 aa2.58□□□□□ -2
NDFIP1-202ENST00000503388 A0A0C4DFX4 3053 aa2.58□□□□□ -2
NDFIP1-202ENST00000503388 LOC400499M0QZD8 3231 aa2.58□□□□□ -2
NDFIP1-202ENST00000503388 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
NDFIP1-202ENST00000503388 KIAA1109Q2LD37 5005 aa2.57□□□□□ -2
NDFIP1-202ENST00000503388 COL6A5A8TX70 2615 aa2.57□□□□□ -2
NDFIP1-202ENST00000503388 STAB1Q9NY15 2570 aa2.57□□□□□ -2
NDFIP1-202ENST00000503388 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
NDFIP1-202ENST00000503388 LRBAP50851 2863 aa2.57□□□□□ -2
NDFIP1-202ENST00000503388 MAP1AP78559 2803 aaPredicted RBP2.56□□□□□ -2
NDFIP1-202ENST00000503388 NBEAL1Q6ZS30 2694 aa2.56□□□□□ -2
NDFIP1-202ENST00000503388 PRAC1Q96KF2 57 aa2.56□□□□□ -2
NDFIP1-202ENST00000503388 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
NDFIP1-202ENST00000503388 LCE3BQ5TA77 95 aa2.55□□□□□ -2
NDFIP1-202ENST00000503388 CELSR2Q9HCU4 2923 aa2.55□□□□□ -2
NDFIP1-202ENST00000503388 M0R2T5 61 aa2.55□□□□□ -2
NDFIP1-202ENST00000503388 H0YAA0 97 aa2.54□□□□□ -2
NDFIP1-202ENST00000503388 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
NDFIP1-202ENST00000503388 TNP1P09430 55 aa2.53□□□□□ -2
NDFIP1-202ENST00000503388 LCE1DQ5T752 114 aa2.53□□□□□ -2
NDFIP1-202ENST00000503388 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -2
NDFIP1-202ENST00000503388 COL12A1Q99715 3063 aa2.53□□□□□ -2
NDFIP1-202ENST00000503388 HERC1Q15751 4861 aa2.52□□□□□ -2.01
NDFIP1-202ENST00000503388 LRP1Q07954 4544 aaKnown RBP2.52□□□□□ -2.01
NDFIP1-202ENST00000503388 NOTCH1P46531 2555 aa2.51□□□□□ -2.01
NDFIP1-202ENST00000503388 CSMD2Q7Z408 3487 aa2.51□□□□□ -2.01
NDFIP1-202ENST00000503388 KRTAP10-8P60410 259 aa2.51□□□□□ -2.01
NDFIP1-202ENST00000503388 DMBT1Q9UGM3 2413 aaPredicted RBP2.5□□□□□ -2.01
NDFIP1-202ENST00000503388 FBN1P35555 2871 aaKnown RBP2.5□□□□□ -2.01
NDFIP1-202ENST00000503388 MXRA5Q9NR99 2828 aa2.5□□□□□ -2.01
NDFIP1-202ENST00000503388 A0A1B0GVY2 172 aa2.49□□□□□ -2.01
NDFIP1-202ENST00000503388 H3BS24 57 aa2.48□□□□□ -2.01
NDFIP1-202ENST00000503388 TACC2O95359 2948 aa2.47□□□□□ -2.01
NDFIP1-202ENST00000503388 EPPK1P58107 5090 aaKnown RBP2.47□□□□□ -2.01
NDFIP1-202ENST00000503388 CRYBG3Q68DQ2 2970 aa2.47□□□□□ -2.01
NDFIP1-202ENST00000503388 STAB2Q8WWQ8 2551 aa2.46□□□□□ -2.02
NDFIP1-202ENST00000503388 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
NDFIP1-202ENST00000503388 NF1P21359 2839 aa2.45□□□□□ -2.02
NDFIP1-202ENST00000503388 COL7A1Q02388 2944 aa2.45□□□□□ -2.02
NDFIP1-202ENST00000503388 HMCN2Q8NDA2 5059 aa2.45□□□□□ -2.02
NDFIP1-202ENST00000503388 NBEAL2Q6ZNJ1 2754 aa2.44□□□□□ -2.02
NDFIP1-202ENST00000503388 A8MU10 97 aa2.44□□□□□ -2.02
NDFIP1-202ENST00000503388 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
NDFIP1-202ENST00000503388 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
NDFIP1-202ENST00000503388 P0C880 135 aa2.42□□□□□ -2.02
NDFIP1-202ENST00000503388 PRO2289Q9P1D8 64 aa2.42□□□□□ -2.02
NDFIP1-202ENST00000503388 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
NDFIP1-202ENST00000503388 KRTAP4-5Q9BYR2 181 aa2.41□□□□□ -2.02
NDFIP1-202ENST00000503388 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.02
NDFIP1-202ENST00000503388 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
NDFIP1-202ENST00000503388 FAT4Q6V0I7 4981 aa2.38□□□□□ -2.03
NDFIP1-202ENST00000503388 KRTAP23-1A1A580 65 aa2.37□□□□□ -2.03
NDFIP1-202ENST00000503388 TENM1Q9UKZ4 2725 aa2.37□□□□□ -2.03
NDFIP1-202ENST00000503388 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
NDFIP1-202ENST00000503388 LPAP08519 4548 aa2.34□□□□□ -2.03
NDFIP1-202ENST00000503388 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
NDFIP1-202ENST00000503388 VWFP04275 2813 aa2.31□□□□□ -2.04
NDFIP1-202ENST00000503388 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
NDFIP1-202ENST00000503388 KRTAP3-1Q9BYR8 98 aa2.3□□□□□ -2.04
NDFIP1-202ENST00000503388 KRTAP10-6P60371 365 aaPredicted RBP2.28□□□□□ -2.04
NDFIP1-202ENST00000503388 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.05
NDFIP1-202ENST00000503388 TENM3Q9P273 2699 aa2.26□□□□□ -2.05
NDFIP1-202ENST00000503388 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
NDFIP1-202ENST00000503388 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
NDFIP1-202ENST00000503388 PKD1L1Q8TDX9 2849 aa2.24□□□□□ -2.05
NDFIP1-202ENST00000503388 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
NDFIP1-202ENST00000503388 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
NDFIP1-202ENST00000503388 KRTAP19-4Q3LI73 84 aa2.23□□□□□ -2.05
NDFIP1-202ENST00000503388 TGP01266 2768 aa2.22□□□□□ -2.05
NDFIP1-202ENST00000503388 INE1O15225 51 aa2.2□□□□□ -2.06
NDFIP1-202ENST00000503388 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
NDFIP1-202ENST00000503388 TENM2Q9NT68 2774 aa2.14□□□□□ -2.07
NDFIP1-202ENST00000503388 KRTAP15-1Q3LI76 137 aa2.14□□□□□ -2.07
NDFIP1-202ENST00000503388 KRTAP9-3Q9BYQ3 159 aa2.12□□□□□ -2.07
NDFIP1-202ENST00000503388 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
NDFIP1-202ENST00000503388 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
NDFIP1-202ENST00000503388 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
NDFIP1-202ENST00000503388 SPRR2GQ9BYE4 73 aa2.03□□□□□ -2.08
NDFIP1-202ENST00000503388 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
NDFIP1-202ENST00000503388 UBR4Q5T4S7 5183 aa2.02□□□□□ -2.09
NDFIP1-202ENST00000503388 SSPOA2VEC9 5147 aa2□□□□□ -2.09
NDFIP1-202ENST00000503388 USH2AO75445 5202 aa1.98□□□□□ -2.09
NDFIP1-202ENST00000503388 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
NDFIP1-202ENST00000503388 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
NDFIP1-202ENST00000503388 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
NDFIP1-202ENST00000503388 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
NDFIP1-202ENST00000503388 MT1HP80294 61 aa1.9□□□□□ -2.11
NDFIP1-202ENST00000503388 MT2AP02795 61 aa1.89□□□□□ -2.11
NDFIP1-202ENST00000503388 SRRM2Q9UQ35 2752 aaKnown RBP1.89□□□□□ -2.11
NDFIP1-202ENST00000503388 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms