RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 C16orf74Q96GX8 76 aa3.73□□□□□ -1.81
CLCN3-203ENST00000502998 PKD1P98161 4303 aa3.73□□□□□ -1.81
CLCN3-203ENST00000502998 SRRM2Q9UQ35 2752 aaKnown RBP3.73□□□□□ -1.81
CLCN3-203ENST00000502998 PSORS1C2Q9UIG4 136 aa3.72□□□□□ -1.81
CLCN3-203ENST00000502998 MRPL34Q9BQ48 92 aaKnown RBP3.71□□□□□ -1.82
CLCN3-203ENST00000502998 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
CLCN3-203ENST00000502998 FLG2Q5D862 2391 aaPredicted RBP3.7□□□□□ -1.82
CLCN3-203ENST00000502998 LRP1BQ9NZR2 4599 aa3.7□□□□□ -1.82
CLCN3-203ENST00000502998 SPRR1AP35321 89 aa3.7□□□□□ -1.82
CLCN3-203ENST00000502998 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
CLCN3-203ENST00000502998 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
CLCN3-203ENST00000502998 H0YAA0 97 aa3.68□□□□□ -1.82
CLCN3-203ENST00000502998 SPART-AS1P0CW21 52 aa3.68□□□□□ -1.82
CLCN3-203ENST00000502998 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
CLCN3-203ENST00000502998 HTN3P15516 51 aa3.66□□□□□ -1.82
CLCN3-203ENST00000502998 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
CLCN3-203ENST00000502998 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
CLCN3-203ENST00000502998 UBE2DNLQ8IWF7 75 aa3.65□□□□□ -1.83
CLCN3-203ENST00000502998 COX6B2Q6YFQ2 88 aa3.64□□□□□ -1.83
CLCN3-203ENST00000502998 Q6ZSA8 131 aa3.64□□□□□ -1.83
CLCN3-203ENST00000502998 CRIPTQ9P021 101 aa3.64□□□□□ -1.83
CLCN3-203ENST00000502998 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
CLCN3-203ENST00000502998 FAT1Q14517 4588 aa3.64□□□□□ -1.83
CLCN3-203ENST00000502998 Q8N1X5 172 aa3.63□□□□□ -1.83
CLCN3-203ENST00000502998 DEFB130BP0DP73 79 aa3.62□□□□□ -1.83
CLCN3-203ENST00000502998 DEFB130AP0DP74 79 aa3.62□□□□□ -1.83
CLCN3-203ENST00000502998 DNAH5Q8TE73 4624 aa3.62□□□□□ -1.83
CLCN3-203ENST00000502998 H1FX-AS1Q4G0G2 97 aa3.61□□□□□ -1.83
CLCN3-203ENST00000502998 SPRR1BP22528 89 aa3.6□□□□□ -1.83
CLCN3-203ENST00000502998 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
CLCN3-203ENST00000502998 KRTAP3-1Q9BYR8 98 aa3.58□□□□□ -1.84
CLCN3-203ENST00000502998 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
CLCN3-203ENST00000502998 PLAC4Q8WY50 150 aa3.57□□□□□ -1.84
CLCN3-203ENST00000502998 KRTAP1-5Q9BYS1 174 aa3.57□□□□□ -1.84
CLCN3-203ENST00000502998 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
CLCN3-203ENST00000502998 A0A096LPF7 62 aa3.56□□□□□ -1.84
CLCN3-203ENST00000502998 H3BNG1 76 aa3.56□□□□□ -1.84
CLCN3-203ENST00000502998 Q6ZRN7 208 aaPredicted RBP3.54□□□□□ -1.84
CLCN3-203ENST00000502998 PRO0255Q9UI72 69 aa3.54□□□□□ -1.84
CLCN3-203ENST00000502998 VPS13BQ7Z7G8 4022 aa3.54□□□□□ -1.84
CLCN3-203ENST00000502998 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
CLCN3-203ENST00000502998 RPL37P61927 97 aaKnown RBP3.53□□□□□ -1.84
CLCN3-203ENST00000502998 R4GN34 69 aa3.52□□□□□ -1.85
CLCN3-203ENST00000502998 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
CLCN3-203ENST00000502998 LELP1Q5T871 98 aa3.5□□□□□ -1.85
CLCN3-203ENST00000502998 INE1O15225 51 aa3.49□□□□□ -1.85
CLCN3-203ENST00000502998 SPACA4Q8TDM5 124 aa3.49□□□□□ -1.85
CLCN3-203ENST00000502998 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
CLCN3-203ENST00000502998 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
CLCN3-203ENST00000502998 KRTAP10-1P60331 282 aa3.48□□□□□ -1.85
CLCN3-203ENST00000502998 Q5VSD8 79 aa3.46□□□□□ -1.86
CLCN3-203ENST00000502998 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
CLCN3-203ENST00000502998 SMR3BP02814 79 aaPredicted RBP3.45□□□□□ -1.86
CLCN3-203ENST00000502998 LINC01556Q5JQF7 62 aa3.45□□□□□ -1.86
CLCN3-203ENST00000502998 PRLHP81277 87 aa3.44□□□□□ -1.86
CLCN3-203ENST00000502998 LRP2P98164 4655 aa3.42□□□□□ -1.86
CLCN3-203ENST00000502998 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
CLCN3-203ENST00000502998 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
CLCN3-203ENST00000502998 DNAH8Q96JB1 4490 aa3.41□□□□□ -1.86
CLCN3-203ENST00000502998 SPINK1P00995 79 aa3.4□□□□□ -1.87
CLCN3-203ENST00000502998 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
CLCN3-203ENST00000502998 KRTAP7-1Q8IUC3 87 aa3.36□□□□□ -1.87
CLCN3-203ENST00000502998 TNXBP22105 4242 aa3.36□□□□□ -1.87
CLCN3-203ENST00000502998 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
CLCN3-203ENST00000502998 KRTAP12-2P59991 146 aa3.33□□□□□ -1.88
CLCN3-203ENST00000502998 S4R3F8 94 aa3.3□□□□□ -1.88
CLCN3-203ENST00000502998 A0A096LNI7 61 aa3.28□□□□□ -1.88
CLCN3-203ENST00000502998 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
CLCN3-203ENST00000502998 MUC2Q02817 5179 aa3.26□□□□□ -1.89
CLCN3-203ENST00000502998 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
CLCN3-203ENST00000502998 KRTAP13-1Q8IUC0 172 aa3.25□□□□□ -1.89
CLCN3-203ENST00000502998 LPAP08519 4548 aa3.23□□□□□ -1.89
CLCN3-203ENST00000502998 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
CLCN3-203ENST00000502998 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
CLCN3-203ENST00000502998 KRTAP10-8P60410 259 aa3.22□□□□□ -1.89
CLCN3-203ENST00000502998 SPINK6Q6UWN8 80 aa3.22□□□□□ -1.89
CLCN3-203ENST00000502998 A0A0D9SG42 100 aa3.19□□□□□ -1.9
CLCN3-203ENST00000502998 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
CLCN3-203ENST00000502998 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
CLCN3-203ENST00000502998 KRTAP12-1P59990 96 aa3.15□□□□□ -1.91
CLCN3-203ENST00000502998 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
CLCN3-203ENST00000502998 KRTAP1-4P0C5Y4 121 aa3.1□□□□□ -1.91
CLCN3-203ENST00000502998 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
CLCN3-203ENST00000502998 M0QZ58 72 aa3.07□□□□□ -1.92
CLCN3-203ENST00000502998 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
CLCN3-203ENST00000502998 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
CLCN3-203ENST00000502998 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.92
CLCN3-203ENST00000502998 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
CLCN3-203ENST00000502998 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
CLCN3-203ENST00000502998 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
CLCN3-203ENST00000502998 KRTAP4-1Q9BYQ7 146 aa2.89□□□□□ -1.95
CLCN3-203ENST00000502998 RPS29P62273 56 aaKnown RBP2.88□□□□□ -1.95
CLCN3-203ENST00000502998 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
CLCN3-203ENST00000502998 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
CLCN3-203ENST00000502998 KRTAP19-2Q3LHN2 52 aa2.83□□□□□ -1.96
CLCN3-203ENST00000502998 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
CLCN3-203ENST00000502998 USH2AO75445 5202 aa2.82□□□□□ -1.96
CLCN3-203ENST00000502998 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
CLCN3-203ENST00000502998 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
CLCN3-203ENST00000502998 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms