RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 CRIPTQ9P021 101 aa9.7□□□□□ -0.86
SCARB2-203ENST00000502908 KRTAP25-1Q3LHN0 102 aa9.61□□□□□ -0.87
SCARB2-203ENST00000502908 KRTAP10-8P60410 259 aa9.6□□□□□ -0.87
SCARB2-203ENST00000502908 KRTAP3-3Q9BYR6 98 aa9.6□□□□□ -0.87
SCARB2-203ENST00000502908 RYR3Q15413 4870 aa9.59□□□□□ -0.87
SCARB2-203ENST00000502908 A0A0D9SG42 100 aa9.57□□□□□ -0.88
SCARB2-203ENST00000502908 KRTAP13-4Q3LI77 160 aa9.56□□□□□ -0.88
SCARB2-203ENST00000502908 KRTAP10-6P60371 365 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-203ENST00000502908 K7ERS5 55 aa9.53□□□□□ -0.88
SCARB2-203ENST00000502908 KRTAP21-3Q3LHN1 58 aa9.53□□□□□ -0.88
SCARB2-203ENST00000502908 LPAP08519 4548 aa9.51□□□□□ -0.89
SCARB2-203ENST00000502908 RPL37P61927 97 aaKnown RBP9.51□□□□□ -0.89
SCARB2-203ENST00000502908 XP32Q5T750 250 aa9.5□□□□□ -0.89
SCARB2-203ENST00000502908 Q5VSD8 79 aa9.49□□□□□ -0.89
SCARB2-203ENST00000502908 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
SCARB2-203ENST00000502908 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
SCARB2-203ENST00000502908 RYR1P21817 5038 aa9.47□□□□□ -0.89
SCARB2-203ENST00000502908 S4R3F8 94 aa9.46□□□□□ -0.9
SCARB2-203ENST00000502908 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
SCARB2-203ENST00000502908 P0C880 135 aa9.43□□□□□ -0.9
SCARB2-203ENST00000502908 ROMO1P60602 79 aa9.39□□□□□ -0.91
SCARB2-203ENST00000502908 LRP2P98164 4655 aa9.34□□□□□ -0.91
SCARB2-203ENST00000502908 H3BS24 57 aa9.29□□□□□ -0.92
SCARB2-203ENST00000502908 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.92
SCARB2-203ENST00000502908 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
SCARB2-203ENST00000502908 KRTAP12-2P59991 146 aa9.25□□□□□ -0.93
SCARB2-203ENST00000502908 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
SCARB2-203ENST00000502908 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
SCARB2-203ENST00000502908 ABCA13Q86UQ4 5058 aa9.22□□□□□ -0.93
SCARB2-203ENST00000502908 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
SCARB2-203ENST00000502908 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
SCARB2-203ENST00000502908 M0QZ58 72 aa8.92□□□□□ -0.98
SCARB2-203ENST00000502908 KRTAP4-5Q9BYR2 181 aa8.92□□□□□ -0.98
SCARB2-203ENST00000502908 MUC17Q685J3 4493 aa8.83□□□□□ -1
SCARB2-203ENST00000502908 R4GN34 69 aa8.82□□□□□ -1
SCARB2-203ENST00000502908 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
SCARB2-203ENST00000502908 KRTAP15-1Q3LI76 137 aa8.79□□□□□ -1
SCARB2-203ENST00000502908 NDUFAF8A1L188 74 aa8.73□□□□□ -1.01
SCARB2-203ENST00000502908 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
SCARB2-203ENST00000502908 MUC2Q02817 5179 aa8.69□□□□□ -1.02
SCARB2-203ENST00000502908 HERC2O95714 4834 aa8.66□□□□□ -1.02
SCARB2-203ENST00000502908 SEC61BP60468 96 aaKnown RBP8.64□□□□□ -1.03
SCARB2-203ENST00000502908 J3QL48 77 aa8.51□□□□□ -1.05
SCARB2-203ENST00000502908 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
SCARB2-203ENST00000502908 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
SCARB2-203ENST00000502908 HERC1Q15751 4861 aa8.39□□□□□ -1.07
SCARB2-203ENST00000502908 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
SCARB2-203ENST00000502908 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.07
SCARB2-203ENST00000502908 BIRC6Q9NR09 4857 aa8.3□□□□□ -1.08
SCARB2-203ENST00000502908 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
SCARB2-203ENST00000502908 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
SCARB2-203ENST00000502908 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
SCARB2-203ENST00000502908 PP632Q6XCG6 107 aa8.14□□□□□ -1.11
SCARB2-203ENST00000502908 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
SCARB2-203ENST00000502908 TNP1P09430 55 aa8.03□□□□□ -1.12
SCARB2-203ENST00000502908 LUZP6Q538Z0 58 aa7.98□□□□□ -1.13
SCARB2-203ENST00000502908 UBR4Q5T4S7 5183 aa7.94□□□□□ -1.14
SCARB2-203ENST00000502908 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
SCARB2-203ENST00000502908 M0R2T5 61 aa7.86□□□□□ -1.15
SCARB2-203ENST00000502908 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
SCARB2-203ENST00000502908 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
SCARB2-203ENST00000502908 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
SCARB2-203ENST00000502908 MT1HP80294 61 aa7.72□□□□□ -1.17
SCARB2-203ENST00000502908 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
SCARB2-203ENST00000502908 MT1FP04733 61 aa7.68□□□□□ -1.18
SCARB2-203ENST00000502908 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
SCARB2-203ENST00000502908 SPRR5A0A1B0GTR4 108 aa7.67□□□□□ -1.18
SCARB2-203ENST00000502908 MT2AP02795 61 aa7.64□□□□□ -1.19
SCARB2-203ENST00000502908 A0A0A0MQY5 61 aa7.61□□□□□ -1.19
SCARB2-203ENST00000502908 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
SCARB2-203ENST00000502908 MT1BP07438 61 aa7.42□□□□□ -1.22
SCARB2-203ENST00000502908 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
SCARB2-203ENST00000502908 MT1XP80297 61 aa7.4□□□□□ -1.22
SCARB2-203ENST00000502908 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
SCARB2-203ENST00000502908 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
SCARB2-203ENST00000502908 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
SCARB2-203ENST00000502908 KRTAP10-7P60409 375 aaPredicted RBP7.28□□□□□ -1.24
SCARB2-203ENST00000502908 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
SCARB2-203ENST00000502908 USH2AO75445 5202 aa7.22□□□□□ -1.25
SCARB2-203ENST00000502908 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
SCARB2-203ENST00000502908 KMT2DO14686 5537 aa7.17□□□□□ -1.26
SCARB2-203ENST00000502908 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
SCARB2-203ENST00000502908 LCE2BO14633 110 aa6.98□□□□□ -1.29
SCARB2-203ENST00000502908 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
SCARB2-203ENST00000502908 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
SCARB2-203ENST00000502908 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
SCARB2-203ENST00000502908 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
SCARB2-203ENST00000502908 INE1O15225 51 aa6.79□□□□□ -1.32
SCARB2-203ENST00000502908 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
SCARB2-203ENST00000502908 LCE2AQ5TA79 106 aaPredicted RBP6.7□□□□□ -1.34
SCARB2-203ENST00000502908 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
SCARB2-203ENST00000502908 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
SCARB2-203ENST00000502908 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
SCARB2-203ENST00000502908 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
SCARB2-203ENST00000502908 MT1LQ93083 61 aa6.39□□□□□ -1.39
SCARB2-203ENST00000502908 MT1EP04732 61 aa6.37□□□□□ -1.39
SCARB2-203ENST00000502908 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
SCARB2-203ENST00000502908 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
SCARB2-203ENST00000502908 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
SCARB2-203ENST00000502908 LCE2DQ5TA82 110 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms