RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
CPNE4-202ENST00000502818 FAM229AH3BQW9 127 aa4.19□□□□□ -1.74
CPNE4-202ENST00000502818 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
CPNE4-202ENST00000502818 NOTCH2NLQ7Z3S9 236 aa4.18□□□□□ -1.74
CPNE4-202ENST00000502818 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
CPNE4-202ENST00000502818 A8MWP4 228 aa4.16□□□□□ -1.74
CPNE4-202ENST00000502818 ASB16-AS1Q495Z4 193 aa4.16□□□□□ -1.74
CPNE4-202ENST00000502818 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
CPNE4-202ENST00000502818 Q8N1X5 172 aa4.16□□□□□ -1.74
CPNE4-202ENST00000502818 LINC00304Q8N9R0 145 aa4.15□□□□□ -1.75
CPNE4-202ENST00000502818 IGHV6-1A0A0B4J1U7 121 aa4.14□□□□□ -1.75
CPNE4-202ENST00000502818 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
CPNE4-202ENST00000502818 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
CPNE4-202ENST00000502818 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
CPNE4-202ENST00000502818 RETNLBQ9BQ08 111 aa4.12□□□□□ -1.75
CPNE4-202ENST00000502818 TP53AIP1Q9HCN2 124 aa4.12□□□□□ -1.75
CPNE4-202ENST00000502818 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
CPNE4-202ENST00000502818 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
CPNE4-202ENST00000502818 SPINK1P00995 79 aa4.12□□□□□ -1.75
CPNE4-202ENST00000502818 DMBT1Q9UGM3 2413 aaPredicted RBP4.11□□□□□ -1.75
CPNE4-202ENST00000502818 MT1HL1P0DM35 61 aa4.11□□□□□ -1.75
CPNE4-202ENST00000502818 SPINK7P58062 85 aa4.11□□□□□ -1.75
CPNE4-202ENST00000502818 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
CPNE4-202ENST00000502818 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
CPNE4-202ENST00000502818 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.75
CPNE4-202ENST00000502818 HRES1P13985 223 aa4.09□□□□□ -1.76
CPNE4-202ENST00000502818 LINC01554Q52M75 96 aa4.09□□□□□ -1.76
CPNE4-202ENST00000502818 LINC00313P59037 77 aa4.08□□□□□ -1.76
CPNE4-202ENST00000502818 KRTAP16-1A8MUX0 517 aa4.05□□□□□ -1.76
CPNE4-202ENST00000502818 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
CPNE4-202ENST00000502818 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
CPNE4-202ENST00000502818 MRPL34Q9BQ48 92 aaKnown RBP4.04□□□□□ -1.76
CPNE4-202ENST00000502818 Q5W150 140 aa4.03□□□□□ -1.76
CPNE4-202ENST00000502818 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
CPNE4-202ENST00000502818 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
CPNE4-202ENST00000502818 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
CPNE4-202ENST00000502818 ACYP2P14621 99 aa4□□□□□ -1.77
CPNE4-202ENST00000502818 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
CPNE4-202ENST00000502818 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
CPNE4-202ENST00000502818 KRTAP13-3Q3SY46 172 aa3.98□□□□□ -1.77
CPNE4-202ENST00000502818 ADM2Q7Z4H4 148 aa3.98□□□□□ -1.77
CPNE4-202ENST00000502818 HERC1Q15751 4861 aa3.98□□□□□ -1.77
CPNE4-202ENST00000502818 LPAP08519 4548 aa3.97□□□□□ -1.77
CPNE4-202ENST00000502818 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CPNE4-202ENST00000502818 A0A1B0GU69 56 aa3.95□□□□□ -1.78
CPNE4-202ENST00000502818 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
CPNE4-202ENST00000502818 UQCR11O14957 56 aa3.93□□□□□ -1.78
CPNE4-202ENST00000502818 MIR22HGQ0VDD5 57 aa3.93□□□□□ -1.78
CPNE4-202ENST00000502818 A8MUU9 505 aa3.92□□□□□ -1.78
CPNE4-202ENST00000502818 C20orf166-AS1Q96NR2 134 aa3.92□□□□□ -1.78
CPNE4-202ENST00000502818 LRP2P98164 4655 aa3.92□□□□□ -1.78
CPNE4-202ENST00000502818 CSAG1Q6PB30 78 aa3.9□□□□□ -1.79
CPNE4-202ENST00000502818 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
CPNE4-202ENST00000502818 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
CPNE4-202ENST00000502818 RPL37P61927 97 aaKnown RBP3.85□□□□□ -1.79
CPNE4-202ENST00000502818 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
CPNE4-202ENST00000502818 TPRXLQ17RH7 258 aa3.84□□□□□ -1.79
CPNE4-202ENST00000502818 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
CPNE4-202ENST00000502818 ROMO1P60602 79 aa3.81□□□□□ -1.8
CPNE4-202ENST00000502818 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
CPNE4-202ENST00000502818 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
CPNE4-202ENST00000502818 KRTAP3-1Q9BYR8 98 aa3.79□□□□□ -1.8
CPNE4-202ENST00000502818 MUC2Q02817 5179 aa3.76□□□□□ -1.81
CPNE4-202ENST00000502818 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
CPNE4-202ENST00000502818 H0YAA0 97 aa3.73□□□□□ -1.81
CPNE4-202ENST00000502818 COX6B2Q6YFQ2 88 aa3.7□□□□□ -1.82
CPNE4-202ENST00000502818 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
CPNE4-202ENST00000502818 A0A1B0GU33 70 aa3.68□□□□□ -1.82
CPNE4-202ENST00000502818 SEC61BP60468 96 aaKnown RBP3.68□□□□□ -1.82
CPNE4-202ENST00000502818 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
CPNE4-202ENST00000502818 K7ERS5 55 aa3.67□□□□□ -1.82
CPNE4-202ENST00000502818 H1FX-AS1Q4G0G2 97 aa3.67□□□□□ -1.82
CPNE4-202ENST00000502818 P0C880 135 aa3.65□□□□□ -1.82
CPNE4-202ENST00000502818 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
CPNE4-202ENST00000502818 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.83
CPNE4-202ENST00000502818 CRIPTQ9P021 101 aa3.59□□□□□ -1.84
CPNE4-202ENST00000502818 S4R3F8 94 aa3.58□□□□□ -1.84
CPNE4-202ENST00000502818 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
CPNE4-202ENST00000502818 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
CPNE4-202ENST00000502818 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
CPNE4-202ENST00000502818 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
CPNE4-202ENST00000502818 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
CPNE4-202ENST00000502818 CRCT1Q9UGL9 99 aa3.5□□□□□ -1.85
CPNE4-202ENST00000502818 MT1HP80294 61 aa3.46□□□□□ -1.86
CPNE4-202ENST00000502818 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
CPNE4-202ENST00000502818 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
CPNE4-202ENST00000502818 A0A0D9SG42 100 aa3.42□□□□□ -1.86
CPNE4-202ENST00000502818 M0R2T5 61 aa3.38□□□□□ -1.87
CPNE4-202ENST00000502818 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CPNE4-202ENST00000502818 KRTAP12-2P59991 146 aa3.36□□□□□ -1.87
CPNE4-202ENST00000502818 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
CPNE4-202ENST00000502818 KRTAP12-1P59990 96 aa3.34□□□□□ -1.88
CPNE4-202ENST00000502818 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.88
CPNE4-202ENST00000502818 MT2AP02795 61 aa3.33□□□□□ -1.88
CPNE4-202ENST00000502818 MT1FP04733 61 aa3.33□□□□□ -1.88
CPNE4-202ENST00000502818 M0QZ58 72 aa3.32□□□□□ -1.88
CPNE4-202ENST00000502818 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
CPNE4-202ENST00000502818 R4GN34 69 aa3.29□□□□□ -1.88
CPNE4-202ENST00000502818 LCE1EQ5T753 118 aa3.28□□□□□ -1.89
CPNE4-202ENST00000502818 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms