RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 FAM236AA0A1B0GUQ0 79 aa11.75□□□□□ -0.53
PROM1-202ENST00000502501 FAM236BA0A1B0GV22 79 aa11.75□□□□□ -0.53
PROM1-202ENST00000502501 KRTAP19-6Q3LI70 58 aa11.75□□□□□ -0.53
PROM1-202ENST00000502501 K7ERU9 68 aa11.73□□□□□ -0.53
PROM1-202ENST00000502501 KLKP1Q107X0 134 aa11.71□□□□□ -0.53
PROM1-202ENST00000502501 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
PROM1-202ENST00000502501 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.66□□□□□ -0.54
PROM1-202ENST00000502501 NDUFC1O43677 76 aa11.64□□□□□ -0.55
PROM1-202ENST00000502501 SPRR2GQ9BYE4 73 aa11.64□□□□□ -0.55
PROM1-202ENST00000502501 H0YAA0 97 aa11.61□□□□□ -0.55
PROM1-202ENST00000502501 MT-ATP8P03928 68 aa11.57□□□□□ -0.56
PROM1-202ENST00000502501 CRIPTQ9P021 101 aa11.57□□□□□ -0.56
PROM1-202ENST00000502501 SMIM20Q8N5G0 67 aa11.54□□□□□ -0.56
PROM1-202ENST00000502501 KRTAP19-8Q3LI54 63 aa11.53□□□□□ -0.56
PROM1-202ENST00000502501 DMAC1Q96GE9 116 aa11.5□□□□□ -0.57
PROM1-202ENST00000502501 MACF1Q9UPN3 7388 aaKnown RBP11.48□□□□□ -0.57
PROM1-202ENST00000502501 Q5VV11 94 aa11.46□□□□□ -0.57
PROM1-202ENST00000502501 TRAV7A0A075B6U4 112 aa11.45□□□□□ -0.58
PROM1-202ENST00000502501 MT1BP07438 61 aa11.44□□□□□ -0.58
PROM1-202ENST00000502501 KRTAP9-7A8MTY7 169 aa11.43□□□□□ -0.58
PROM1-202ENST00000502501 SYNE2Q8WXH0 6885 aaKnown RBP11.32□□□□□ -0.6
PROM1-202ENST00000502501 ADM2Q7Z4H4 148 aa11.32□□□□□ -0.6
PROM1-202ENST00000502501 A6NN06 94 aa11.22□□□□□ -0.61
PROM1-202ENST00000502501 ACYP2P14621 99 aa11.21□□□□□ -0.61
PROM1-202ENST00000502501 C20orf197Q8N268 126 aa11.21□□□□□ -0.61
PROM1-202ENST00000502501 KRTAP10-5P60370 271 aa11.17□□□□□ -0.62
PROM1-202ENST00000502501 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
PROM1-202ENST00000502501 SPANXA2-OT1Q8N9U9 137 aa11.1□□□□□ -0.63
PROM1-202ENST00000502501 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
PROM1-202ENST00000502501 P0C880 135 aa11.09□□□□□ -0.63
PROM1-202ENST00000502501 SPTSSBQ8NFR3 76 aa11.08□□□□□ -0.64
PROM1-202ENST00000502501 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
PROM1-202ENST00000502501 R4GN34 69 aa11.06□□□□□ -0.64
PROM1-202ENST00000502501 KRTAP6-3Q3LI67 103 aa11.01□□□□□ -0.65
PROM1-202ENST00000502501 CHKB-CPT1BH3BT56 60 aa10.95□□□□□ -0.66
PROM1-202ENST00000502501 M0QZ58 72 aa10.95□□□□□ -0.66
PROM1-202ENST00000502501 PLAC4Q8WY50 150 aa10.88□□□□□ -0.67
PROM1-202ENST00000502501 PRO2289Q9P1D8 64 aa10.86□□□□□ -0.67
PROM1-202ENST00000502501 COX7CP15954 63 aa10.84□□□□□ -0.67
PROM1-202ENST00000502501 MT1XP80297 61 aa10.79□□□□□ -0.68
PROM1-202ENST00000502501 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
PROM1-202ENST00000502501 COA5Q86WW8 74 aa10.67□□□□□ -0.7
PROM1-202ENST00000502501 H7BZZ5 65 aa10.65□□□□□ -0.7
PROM1-202ENST00000502501 KRTAP5-9P26371 169 aa10.65□□□□□ -0.7
PROM1-202ENST00000502501 MUC12Q9UKN1 5478 aa10.64□□□□□ -0.71
PROM1-202ENST00000502501 NEBP20929 6669 aa10.63□□□□□ -0.71
PROM1-202ENST00000502501 KRTAP12-2P59991 146 aa10.59□□□□□ -0.71
PROM1-202ENST00000502501 CYSTM1Q9H1C7 97 aa10.57□□□□□ -0.72
PROM1-202ENST00000502501 KMT2DO14686 5537 aa10.55□□□□□ -0.72
PROM1-202ENST00000502501 ANAPC13Q9BS18 74 aa10.51□□□□□ -0.73
PROM1-202ENST00000502501 MDN1Q9NU22 5596 aa10.44□□□□□ -0.74
PROM1-202ENST00000502501 KRTAP13-4Q3LI77 160 aa10.44□□□□□ -0.74
PROM1-202ENST00000502501 SEC61GP60059 68 aa10.43□□□□□ -0.74
PROM1-202ENST00000502501 SERP1Q9Y6X1 66 aa10.39□□□□□ -0.75
PROM1-202ENST00000502501 KRTAP8-1Q8IUC2 63 aa10.31□□□□□ -0.76
PROM1-202ENST00000502501 KRTAP10-12P60413 245 aa10.3□□□□□ -0.76
PROM1-202ENST00000502501 CCDC179H3BU77 68 aa10.27□□□□□ -0.77
PROM1-202ENST00000502501 SPRR2FQ96RM1 72 aa10.26□□□□□ -0.77
PROM1-202ENST00000502501 ATP5EP56381 51 aaPredicted RBP10.25□□□□□ -0.77
PROM1-202ENST00000502501 KRTAP10-7P60409 375 aaPredicted RBP10.25□□□□□ -0.77
PROM1-202ENST00000502501 A0A1B0GU33 70 aa10.23□□□□□ -0.77
PROM1-202ENST00000502501 KRTAP4-8A0A0G2JLE6 195 aa10.17□□□□□ -0.78
PROM1-202ENST00000502501 CAMK2N1Q7Z7J9 78 aa10.17□□□□□ -0.78
PROM1-202ENST00000502501 KRTAP4-8Q9BYQ9 185 aa10.17□□□□□ -0.78
PROM1-202ENST00000502501 A0A1B0GU69 56 aa10.12□□□□□ -0.79
PROM1-202ENST00000502501 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
PROM1-202ENST00000502501 A0A0D9SG42 100 aa10.07□□□□□ -0.8
PROM1-202ENST00000502501 SPRR2EP22531 72 aa10.05□□□□□ -0.8
PROM1-202ENST00000502501 SPRR2BP35325 72 aa10.05□□□□□ -0.8
PROM1-202ENST00000502501 SPRR2AP35326 72 aa10.05□□□□□ -0.8
PROM1-202ENST00000502501 KRTAP20-1Q3LI63 56 aa10.04□□□□□ -0.8
PROM1-202ENST00000502501 TMEM258P61165 79 aa10.01□□□□□ -0.81
PROM1-202ENST00000502501 LCE1AQ5T7P2 110 aa10.01□□□□□ -0.81
PROM1-202ENST00000502501 KRTAP12-1P59990 96 aa9.98□□□□□ -0.81
PROM1-202ENST00000502501 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
PROM1-202ENST00000502501 SPINT4Q6UDR6 99 aa9.93□□□□□ -0.82
PROM1-202ENST00000502501 PRR15LQ9BU68 103 aa9.93□□□□□ -0.82
PROM1-202ENST00000502501 KRTAP2-3P0C7H8 128 aa9.87□□□□□ -0.83
PROM1-202ENST00000502501 KRTAP2-4Q9BYR9 128 aa9.87□□□□□ -0.83
PROM1-202ENST00000502501 LINC01558Q9Y6Z2 57 aa9.87□□□□□ -0.83
PROM1-202ENST00000502501 A8MU10 97 aa9.78□□□□□ -0.84
PROM1-202ENST00000502501 SPRR2DP22532 72 aa9.72□□□□□ -0.85
PROM1-202ENST00000502501 KRTAP19-7Q3SYF9 63 aa9.66□□□□□ -0.86
PROM1-202ENST00000502501 UQCR11O14957 56 aa9.6□□□□□ -0.87
PROM1-202ENST00000502501 KRTAP2-2Q9BYT5 123 aa9.57□□□□□ -0.88
PROM1-202ENST00000502501 KRTAP2-1Q9BYU5 128 aa9.57□□□□□ -0.88
PROM1-202ENST00000502501 MT1EP04732 61 aa9.56□□□□□ -0.88
PROM1-202ENST00000502501 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
PROM1-202ENST00000502501 TNP1P09430 55 aa9.47□□□□□ -0.89
PROM1-202ENST00000502501 LCE5AQ5TCM9 118 aa9.47□□□□□ -0.89
PROM1-202ENST00000502501 LCE3BQ5TA77 95 aa9.46□□□□□ -0.9
PROM1-202ENST00000502501 KRTAP19-3Q7Z4W3 81 aa9.45□□□□□ -0.9
PROM1-202ENST00000502501 V9GYY9 64 aa9.45□□□□□ -0.9
PROM1-202ENST00000502501 KRTAP19-5Q3LI72 72 aa9.41□□□□□ -0.9
PROM1-202ENST00000502501 Q1T7F1 81 aa9.38□□□□□ -0.91
PROM1-202ENST00000502501 MIR22HGQ0VDD5 57 aa9.36□□□□□ -0.91
PROM1-202ENST00000502501 LCE3AQ5TA76 89 aa9.3□□□□□ -0.92
PROM1-202ENST00000502501 MT1GP13640 62 aa9.27□□□□□ -0.93
PROM1-202ENST00000502501 DSTQ03001 7570 aaKnown RBP9.23□□□□□ -0.93
PROM1-202ENST00000502501 PSPHP1O15172 72 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms