RNA–Protein interactions for RNA: ENST00000499624.3

GABPB1-AS1-202, GABPB1 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1-AS1, Length 16,182 nt, Biotype antisense RNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-AS1-202ENST00000499624 PRKDCP78527 4128 aaKnown RBP2.16□□□□□ -2.06
GABPB1-AS1-202ENST00000499624 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
GABPB1-AS1-202ENST00000499624 PRAC1Q96KF2 57 aa2.14□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 PCLOQ9Y6V0 5065 aa2.12□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 LORP23490 312 aaPredicted RBP2.12□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 DNAH9Q9NYC9 4486 aa2.11□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 DNAH10Q8IVF4 4471 aa2.1□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 DNAH2Q9P225 4427 aa2.1□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
GABPB1-AS1-202ENST00000499624 KRTAP12-1P59990 96 aa2.09□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 PLECQ15149 4684 aaKnown RBP2.08□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 LYSTQ99698 3801 aa2.07□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 KRTAP12-2P59991 146 aa2.07□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 RYR3Q15413 4870 aa2.07□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 PKHD1P08F94 4074 aa2.07□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 RYR2Q92736 4967 aa2.06□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 FAT1Q14517 4588 aa2.06□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 KRTAP15-1Q3LI76 137 aa2.04□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 PKHD1L1Q86WI1 4243 aa2.03□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 VPS13CQ709C8 3753 aa2.03□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 KMT2CQ8NEZ4 4911 aaKnown RBP2.03□□□□□ -2.08
GABPB1-AS1-202ENST00000499624 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 DNAH11Q96DT5 4516 aa2.02□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 MT1HL1P0DM35 61 aa2.02□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 LPAP08519 4548 aa2.02□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 DYNC1H1Q14204 4646 aaKnown RBP2.01□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 HERC2O95714 4834 aa2.01□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 KRTAP4-5Q9BYR2 181 aa2□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 SPRR2GQ9BYE4 73 aa1.98□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 HERC1Q15751 4861 aa1.98□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 HYDINQ4G0P3 5121 aa1.97□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 KRTAP10-4P60372 401 aaPredicted RBP1.97□□□□□ -2.09
GABPB1-AS1-202ENST00000499624 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 ABCA13Q86UQ4 5058 aa1.96□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 KRTAP10-6P60371 365 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 CSMD3Q7Z407 3707 aa1.94□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 APOBP04114 4563 aaKnown RBP1.94□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 MT3P25713 68 aa1.93□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
GABPB1-AS1-202ENST00000499624 EPPK1P58107 5090 aaKnown RBP1.9□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 PKD1P98161 4303 aa1.89□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 TNXBP22105 4242 aa1.89□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 KRTAP10-7P60409 375 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 KRTAP3-1Q9BYR8 98 aa1.85□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 FAT3Q8TDW7 4589 aa1.85□□□□□ -2.11
GABPB1-AS1-202ENST00000499624 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 KRTAP3-3Q9BYR6 98 aa1.83□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 LCE2CQ5TA81 110 aa1.81□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 KRTAP3-2Q9BYR7 98 aa1.81□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 HSPG2P98160 4391 aa1.8□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 MT1GP13640 62 aa1.79□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 MT1HP80294 61 aa1.78□□□□□ -2.12
GABPB1-AS1-202ENST00000499624 HMCN2Q8NDA2 5059 aa1.76□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 KRTAP17-1Q9BYP8 105 aa1.75□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 KRTAP10-5P60370 271 aa1.74□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 MT1FP04733 61 aa1.73□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 MT2AP02795 61 aa1.72□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 LCE2BO14633 110 aa1.72□□□□□ -2.13
GABPB1-AS1-202ENST00000499624 LCE3CQ5T5A8 94 aa1.71□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 LCE1AQ5T7P2 110 aa1.69□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 LCE2DQ5TA82 110 aaPredicted RBP1.68□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 USH2AO75445 5202 aa1.68□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
GABPB1-AS1-202ENST00000499624 MT1LQ93083 61 aa1.64□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 KRTAP19-6Q3LI70 58 aa1.63□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 MT1EP04732 61 aa1.63□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 SPRR2DP22532 72 aa1.63□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 SPRR2AP35326 72 aa1.62□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 LRP2P98164 4655 aa1.61□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 MUC2Q02817 5179 aa1.61□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 SPRR2EP22531 72 aa1.61□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 SPRR2BP35325 72 aa1.61□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 DSTQ03001 7570 aaKnown RBP1.6□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 LCE4AQ5TA78 99 aa1.59□□□□□ -2.15
GABPB1-AS1-202ENST00000499624 KRTAP19-3Q7Z4W3 81 aa1.59□□□□□ -2.16
GABPB1-AS1-202ENST00000499624 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.16
GABPB1-AS1-202ENST00000499624 MUC17Q685J3 4493 aa1.58□□□□□ -2.16
GABPB1-AS1-202ENST00000499624 FSIP2Q5CZC0 6907 aa1.57□□□□□ -2.16
GABPB1-AS1-202ENST00000499624 MT1MQ8N339 61 aa1.57□□□□□ -2.16
GABPB1-AS1-202ENST00000499624 MT1BP07438 61 aa1.56□□□□□ -2.16
GABPB1-AS1-202ENST00000499624 KRTAP9-2Q9BYQ4 174 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms