RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 IGLV7-43P04211 117 aa2.23□□□□□ -2.05
CLTC-209ENST00000498711 ACYP2P14621 99 aa2.23□□□□□ -2.05
CLTC-209ENST00000498711 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
CLTC-209ENST00000498711 SPAG11AQ6PDA7 123 aa2.22□□□□□ -2.05
CLTC-209ENST00000498711 C7orf65Q6ZTY9 151 aa2.22□□□□□ -2.05
CLTC-209ENST00000498711 RBM12B-AS1Q9P1G2 102 aa2.22□□□□□ -2.05
CLTC-209ENST00000498711 PKHD1P08F94 4074 aa2.21□□□□□ -2.06
CLTC-209ENST00000498711 PKHD1L1Q86WI1 4243 aa2.21□□□□□ -2.06
CLTC-209ENST00000498711 DNAH5Q8TE73 4624 aa2.21□□□□□ -2.06
CLTC-209ENST00000498711 ANAPC11Q9NYG5 84 aa2.2□□□□□ -2.06
CLTC-209ENST00000498711 VPS13BQ7Z7G8 4022 aa2.2□□□□□ -2.06
CLTC-209ENST00000498711 PKD1P98161 4303 aa2.2□□□□□ -2.06
CLTC-209ENST00000498711 EPPK1P58107 5090 aaKnown RBP2.2□□□□□ -2.06
CLTC-209ENST00000498711 RYR1P21817 5038 aa2.19□□□□□ -2.06
CLTC-209ENST00000498711 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
CLTC-209ENST00000498711 LINC00313P59037 77 aa2.19□□□□□ -2.06
CLTC-209ENST00000498711 Q6ZSA8 131 aa2.19□□□□□ -2.06
CLTC-209ENST00000498711 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
CLTC-209ENST00000498711 LRP1BQ9NZR2 4599 aa2.17□□□□□ -2.06
CLTC-209ENST00000498711 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
CLTC-209ENST00000498711 KRTAP1-4P0C5Y4 121 aa2.17□□□□□ -2.06
CLTC-209ENST00000498711 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
CLTC-209ENST00000498711 CIRBP-AS1Q8TBR5 109 aa2.15□□□□□ -2.06
CLTC-209ENST00000498711 A0A1B0GU69 56 aa2.15□□□□□ -2.07
CLTC-209ENST00000498711 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
CLTC-209ENST00000498711 HSPG2P98160 4391 aa2.14□□□□□ -2.07
CLTC-209ENST00000498711 SPINK6Q6UWN8 80 aa2.14□□□□□ -2.07
CLTC-209ENST00000498711 PCLOQ9Y6V0 5065 aa2.14□□□□□ -2.07
CLTC-209ENST00000498711 UQCR11O14957 56 aa2.14□□□□□ -2.07
CLTC-209ENST00000498711 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
CLTC-209ENST00000498711 FAT1Q14517 4588 aa2.13□□□□□ -2.07
CLTC-209ENST00000498711 SPINK1P00995 79 aa2.12□□□□□ -2.07
CLTC-209ENST00000498711 KRTAP10-1P60331 282 aa2.12□□□□□ -2.07
CLTC-209ENST00000498711 A8MUU9 505 aa2.11□□□□□ -2.07
CLTC-209ENST00000498711 Q5VSD8 79 aa2.11□□□□□ -2.07
CLTC-209ENST00000498711 C20orf166-AS1Q96NR2 134 aa2.11□□□□□ -2.07
CLTC-209ENST00000498711 KRTAP10-4P60372 401 aaPredicted RBP2.11□□□□□ -2.07
CLTC-209ENST00000498711 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
CLTC-209ENST00000498711 LINC01554Q52M75 96 aa2.09□□□□□ -2.07
CLTC-209ENST00000498711 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.07
CLTC-209ENST00000498711 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.08
CLTC-209ENST00000498711 H0YAA0 97 aa2.07□□□□□ -2.08
CLTC-209ENST00000498711 LUZP6Q538Z0 58 aa2.07□□□□□ -2.08
CLTC-209ENST00000498711 ABCA13Q86UQ4 5058 aa2.07□□□□□ -2.08
CLTC-209ENST00000498711 SMR3BP02814 79 aaPredicted RBP2.06□□□□□ -2.08
CLTC-209ENST00000498711 KRTAP2-2Q9BYT5 123 aa2.06□□□□□ -2.08
CLTC-209ENST00000498711 FAT3Q8TDW7 4589 aa2.06□□□□□ -2.08
CLTC-209ENST00000498711 LRP1Q07954 4544 aaKnown RBP2.06□□□□□ -2.08
CLTC-209ENST00000498711 H1FX-AS1Q4G0G2 97 aa2.06□□□□□ -2.08
CLTC-209ENST00000498711 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
CLTC-209ENST00000498711 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
CLTC-209ENST00000498711 MYCBP2O75592 4640 aa2.05□□□□□ -2.08
CLTC-209ENST00000498711 CSAG1Q6PB30 78 aa2.05□□□□□ -2.08
CLTC-209ENST00000498711 KRTAP25-1Q3LHN0 102 aa2.04□□□□□ -2.08
CLTC-209ENST00000498711 A0A1B0GU33 70 aa2.04□□□□□ -2.08
CLTC-209ENST00000498711 COX6B2Q6YFQ2 88 aa2.03□□□□□ -2.08
CLTC-209ENST00000498711 TNXBP22105 4242 aa2.02□□□□□ -2.09
CLTC-209ENST00000498711 MT1HL1P0DM35 61 aa2.01□□□□□ -2.09
CLTC-209ENST00000498711 KRTAP10-6P60371 365 aaPredicted RBP2.01□□□□□ -2.09
CLTC-209ENST00000498711 KRTAP10-8P60410 259 aa2.01□□□□□ -2.09
CLTC-209ENST00000498711 FLG2Q5D862 2391 aaPredicted RBP1.99□□□□□ -2.09
CLTC-209ENST00000498711 HMCN2Q8NDA2 5059 aa1.98□□□□□ -2.09
CLTC-209ENST00000498711 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
CLTC-209ENST00000498711 C9orf92A6NGG3 77 aa1.97□□□□□ -2.09
CLTC-209ENST00000498711 ROMO1P60602 79 aa1.97□□□□□ -2.09
CLTC-209ENST00000498711 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
CLTC-209ENST00000498711 HERC1Q15751 4861 aa1.96□□□□□ -2.09
CLTC-209ENST00000498711 K7ERS5 55 aa1.96□□□□□ -2.1
CLTC-209ENST00000498711 RPL37P61927 97 aaKnown RBP1.96□□□□□ -2.1
CLTC-209ENST00000498711 LPAP08519 4548 aa1.95□□□□□ -2.1
CLTC-209ENST00000498711 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
CLTC-209ENST00000498711 DMBT1Q9UGM3 2413 aaPredicted RBP1.93□□□□□ -2.1
CLTC-209ENST00000498711 P0C880 135 aa1.93□□□□□ -2.1
CLTC-209ENST00000498711 KRTAP10-12P60413 245 aa1.93□□□□□ -2.1
CLTC-209ENST00000498711 S4R3F8 94 aa1.92□□□□□ -2.1
CLTC-209ENST00000498711 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
CLTC-209ENST00000498711 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
CLTC-209ENST00000498711 LRP2P98164 4655 aa1.9□□□□□ -2.11
CLTC-209ENST00000498711 MUC2Q02817 5179 aa1.9□□□□□ -2.11
CLTC-209ENST00000498711 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
CLTC-209ENST00000498711 KRTAP5-9P26371 169 aa1.89□□□□□ -2.11
CLTC-209ENST00000498711 KRTAP12-2P59991 146 aa1.89□□□□□ -2.11
CLTC-209ENST00000498711 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
CLTC-209ENST00000498711 M0QZ58 72 aa1.89□□□□□ -2.11
CLTC-209ENST00000498711 SPINT4Q6UDR6 99 aa1.88□□□□□ -2.11
CLTC-209ENST00000498711 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
CLTC-209ENST00000498711 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
CLTC-209ENST00000498711 A0A0D9SG42 100 aa1.85□□□□□ -2.11
CLTC-209ENST00000498711 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
CLTC-209ENST00000498711 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
CLTC-209ENST00000498711 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
CLTC-209ENST00000498711 UBR4Q5T4S7 5183 aa1.81□□□□□ -2.12
CLTC-209ENST00000498711 R4GN34 69 aa1.81□□□□□ -2.12
CLTC-209ENST00000498711 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
CLTC-209ENST00000498711 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
CLTC-209ENST00000498711 FAT4Q6V0I7 4981 aa1.79□□□□□ -2.12
CLTC-209ENST00000498711 KRTAP10-5P60370 271 aa1.76□□□□□ -2.13
CLTC-209ENST00000498711 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
CLTC-209ENST00000498711 PP632Q6XCG6 107 aa1.76□□□□□ -2.13
CLTC-209ENST00000498711 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms