RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TMA7Q9Y2S6 64 aaKnown RBP6.11□□□□□ -1.43
TRAF4-212ENST00000498540 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
TRAF4-212ENST00000498540 A8MUN3 132 aa6.08□□□□□ -1.44
TRAF4-212ENST00000498540 H0YAA0 97 aa6.08□□□□□ -1.44
TRAF4-212ENST00000498540 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
TRAF4-212ENST00000498540 BATFQ16520 125 aa6.08□□□□□ -1.44
TRAF4-212ENST00000498540 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
TRAF4-212ENST00000498540 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
TRAF4-212ENST00000498540 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
TRAF4-212ENST00000498540 C9orf118A6NHY6 69 aa6.06□□□□□ -1.44
TRAF4-212ENST00000498540 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
TRAF4-212ENST00000498540 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
TRAF4-212ENST00000498540 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
TRAF4-212ENST00000498540 ADM2Q7Z4H4 148 aa6.03□□□□□ -1.44
TRAF4-212ENST00000498540 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
TRAF4-212ENST00000498540 K7EP34 96 aa6.02□□□□□ -1.45
TRAF4-212ENST00000498540 NDUFC1O43677 76 aa6.02□□□□□ -1.45
TRAF4-212ENST00000498540 TAX1BP3O14907 124 aa6.01□□□□□ -1.45
TRAF4-212ENST00000498540 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
TRAF4-212ENST00000498540 TRAV22A0A0B4J277 110 aa5.95□□□□□ -1.46
TRAF4-212ENST00000498540 SPCS1Q9Y6A9 102 aa5.93□□□□□ -1.46
TRAF4-212ENST00000498540 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
TRAF4-212ENST00000498540 SMIM6P0DI80 62 aa5.9□□□□□ -1.46
TRAF4-212ENST00000498540 R4GN34 69 aa5.9□□□□□ -1.46
TRAF4-212ENST00000498540 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
TRAF4-212ENST00000498540 ACYP1P07311 99 aa5.86□□□□□ -1.47
TRAF4-212ENST00000498540 P0C880 135 aa5.86□□□□□ -1.47
TRAF4-212ENST00000498540 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
TRAF4-212ENST00000498540 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
TRAF4-212ENST00000498540 M0QZ58 72 aa5.84□□□□□ -1.47
TRAF4-212ENST00000498540 H0Y9P7 68 aa5.81□□□□□ -1.48
TRAF4-212ENST00000498540 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
TRAF4-212ENST00000498540 ATOX1O00244 68 aa5.77□□□□□ -1.49
TRAF4-212ENST00000498540 UQCRQO14949 82 aa5.77□□□□□ -1.49
TRAF4-212ENST00000498540 C20orf197Q8N268 126 aa5.77□□□□□ -1.49
TRAF4-212ENST00000498540 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
TRAF4-212ENST00000498540 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
TRAF4-212ENST00000498540 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
TRAF4-212ENST00000498540 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
TRAF4-212ENST00000498540 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
TRAF4-212ENST00000498540 HIST1H4AP62805 103 aaKnown RBP5.65□□□□□ -1.5
TRAF4-212ENST00000498540 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
TRAF4-212ENST00000498540 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
TRAF4-212ENST00000498540 F8W1H4 67 aa5.6□□□□□ -1.51
TRAF4-212ENST00000498540 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
TRAF4-212ENST00000498540 GTF2H5Q6ZYL4 71 aa5.58□□□□□ -1.52
TRAF4-212ENST00000498540 MT-ATP8P03928 68 aa5.56□□□□□ -1.52
TRAF4-212ENST00000498540 DMAC1Q96GE9 116 aa5.56□□□□□ -1.52
TRAF4-212ENST00000498540 MP68P56378 58 aa5.55□□□□□ -1.52
TRAF4-212ENST00000498540 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
TRAF4-212ENST00000498540 KRTAP19-7Q3SYF9 63 aa5.54□□□□□ -1.52
TRAF4-212ENST00000498540 LOC105371267A0A1B0GV96 52 aa5.53□□□□□ -1.52
TRAF4-212ENST00000498540 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
TRAF4-212ENST00000498540 OCR1Q9BZK8 76 aa5.52□□□□□ -1.53
TRAF4-212ENST00000498540 MT1EP04732 61 aa5.51□□□□□ -1.53
TRAF4-212ENST00000498540 FAM240AA0A1B0GVK7 77 aa5.49□□□□□ -1.53
TRAF4-212ENST00000498540 MT4P47944 62 aa5.44□□□□□ -1.54
TRAF4-212ENST00000498540 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
TRAF4-212ENST00000498540 HMCN1Q96RW7 5635 aa5.41□□□□□ -1.54
TRAF4-212ENST00000498540 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
TRAF4-212ENST00000498540 H3BPC8 53 aa5.4□□□□□ -1.54
TRAF4-212ENST00000498540 LINC00643Q86TS7 51 aa5.4□□□□□ -1.54
TRAF4-212ENST00000498540 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
TRAF4-212ENST00000498540 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
TRAF4-212ENST00000498540 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
TRAF4-212ENST00000498540 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
TRAF4-212ENST00000498540 MT1GP13640 62 aa5.33□□□□□ -1.56
TRAF4-212ENST00000498540 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
TRAF4-212ENST00000498540 ACYP2P14621 99 aa5.32□□□□□ -1.56
TRAF4-212ENST00000498540 SPTSSBQ8NFR3 76 aa5.32□□□□□ -1.56
TRAF4-212ENST00000498540 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
TRAF4-212ENST00000498540 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
TRAF4-212ENST00000498540 MT1MQ8N339 61 aa5.27□□□□□ -1.57
TRAF4-212ENST00000498540 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
TRAF4-212ENST00000498540 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
TRAF4-212ENST00000498540 A0A0D9SG42 100 aa5.24□□□□□ -1.57
TRAF4-212ENST00000498540 CHKB-CPT1BH3BT56 60 aa5.22□□□□□ -1.57
TRAF4-212ENST00000498540 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
TRAF4-212ENST00000498540 PCP4L1A6NKN8 68 aa5.2□□□□□ -1.58
TRAF4-212ENST00000498540 MT1LQ93083 61 aa5.2□□□□□ -1.58
TRAF4-212ENST00000498540 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
TRAF4-212ENST00000498540 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
TRAF4-212ENST00000498540 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
TRAF4-212ENST00000498540 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
TRAF4-212ENST00000498540 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
TRAF4-212ENST00000498540 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
TRAF4-212ENST00000498540 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
TRAF4-212ENST00000498540 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
TRAF4-212ENST00000498540 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
TRAF4-212ENST00000498540 SNURFQ9Y675 71 aa4.98□□□□□ -1.61
TRAF4-212ENST00000498540 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
TRAF4-212ENST00000498540 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
TRAF4-212ENST00000498540 SMIM20Q8N5G0 67 aa4.94□□□□□ -1.62
TRAF4-212ENST00000498540 SPANXA2-OT1Q8N9U9 137 aa4.93□□□□□ -1.62
TRAF4-212ENST00000498540 J3QR89 54 aa4.92□□□□□ -1.62
TRAF4-212ENST00000498540 A0A1B0GV90 55 aa4.89□□□□□ -1.63
TRAF4-212ENST00000498540 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
TRAF4-212ENST00000498540 SEC61GP60059 68 aa4.88□□□□□ -1.63
TRAF4-212ENST00000498540 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
TRAF4-212ENST00000498540 A0A1B0GU33 70 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms