RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 C1orf64Q8NEQ6 169 aa5.4□□□□□ -1.54
CNOT4-211ENST00000498534 LCA10Q71F78 164 aa5.37□□□□□ -1.55
CNOT4-211ENST00000498534 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
CNOT4-211ENST00000498534 A0A1W2PPM0 123 aa5.35□□□□□ -1.55
CNOT4-211ENST00000498534 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
CNOT4-211ENST00000498534 KLKP1Q107X0 134 aa5.34□□□□□ -1.55
CNOT4-211ENST00000498534 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
CNOT4-211ENST00000498534 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
CNOT4-211ENST00000498534 TAX1BP3O14907 124 aa5.31□□□□□ -1.56
CNOT4-211ENST00000498534 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
CNOT4-211ENST00000498534 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
CNOT4-211ENST00000498534 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
CNOT4-211ENST00000498534 CRIPTQ9P021 101 aa5.29□□□□□ -1.56
CNOT4-211ENST00000498534 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
CNOT4-211ENST00000498534 SPCS1Q9Y6A9 102 aa5.27□□□□□ -1.57
CNOT4-211ENST00000498534 KMT2DO14686 5537 aa5.26□□□□□ -1.57
CNOT4-211ENST00000498534 CYP4F30PQ9H0H9 118 aa5.22□□□□□ -1.57
CNOT4-211ENST00000498534 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
CNOT4-211ENST00000498534 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
CNOT4-211ENST00000498534 A0A087WVE0 104 aa5.17□□□□□ -1.58
CNOT4-211ENST00000498534 NDUFC1O43677 76 aa5.16□□□□□ -1.58
CNOT4-211ENST00000498534 PRO0461Q9UI25 63 aa5.16□□□□□ -1.58
CNOT4-211ENST00000498534 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.59
CNOT4-211ENST00000498534 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
CNOT4-211ENST00000498534 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
CNOT4-211ENST00000498534 H0YAA0 97 aa5.13□□□□□ -1.59
CNOT4-211ENST00000498534 K7EP34 96 aa5.12□□□□□ -1.59
CNOT4-211ENST00000498534 COL5A1-AS1Q5SY13 56 aa5.12□□□□□ -1.59
CNOT4-211ENST00000498534 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
CNOT4-211ENST00000498534 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
CNOT4-211ENST00000498534 SPRR2EP22531 72 aa5.1□□□□□ -1.59
CNOT4-211ENST00000498534 SPRR2BP35325 72 aa5.1□□□□□ -1.59
CNOT4-211ENST00000498534 SPRR2AP35326 72 aa5.1□□□□□ -1.59
CNOT4-211ENST00000498534 A8MUN3 132 aa5.09□□□□□ -1.59
CNOT4-211ENST00000498534 ACYP1P07311 99 aa5.09□□□□□ -1.59
CNOT4-211ENST00000498534 ADM2Q7Z4H4 148 aa5.09□□□□□ -1.59
CNOT4-211ENST00000498534 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
CNOT4-211ENST00000498534 F8W1H4 67 aa5.06□□□□□ -1.6
CNOT4-211ENST00000498534 ATOX1O00244 68 aa5.06□□□□□ -1.6
CNOT4-211ENST00000498534 GTF2H5Q6ZYL4 71 aa5.06□□□□□ -1.6
CNOT4-211ENST00000498534 UQCRQO14949 82 aa5.05□□□□□ -1.6
CNOT4-211ENST00000498534 LOC105371267A0A1B0GV96 52 aa5.04□□□□□ -1.6
CNOT4-211ENST00000498534 H0Y9P7 68 aa5.04□□□□□ -1.6
CNOT4-211ENST00000498534 ETDBQ3ZM63 59 aa5.04□□□□□ -1.6
CNOT4-211ENST00000498534 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
CNOT4-211ENST00000498534 MT1XP80297 61 aa5.03□□□□□ -1.6
CNOT4-211ENST00000498534 HIST1H4AP62805 103 aaKnown RBP5□□□□□ -1.61
CNOT4-211ENST00000498534 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
CNOT4-211ENST00000498534 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
CNOT4-211ENST00000498534 R4GN34 69 aa4.99□□□□□ -1.61
CNOT4-211ENST00000498534 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
CNOT4-211ENST00000498534 ATP5EP2Q5VTU8 51 aa4.97□□□□□ -1.61
CNOT4-211ENST00000498534 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
CNOT4-211ENST00000498534 LINC00208Q96KT6 92 aa4.95□□□□□ -1.62
CNOT4-211ENST00000498534 SPRR2DP22532 72 aa4.93□□□□□ -1.62
CNOT4-211ENST00000498534 M0QZ58 72 aa4.92□□□□□ -1.62
CNOT4-211ENST00000498534 P0C880 135 aa4.91□□□□□ -1.62
CNOT4-211ENST00000498534 MP68P56378 58 aa4.91□□□□□ -1.62
CNOT4-211ENST00000498534 FAM240AA0A1B0GVK7 77 aa4.9□□□□□ -1.63
CNOT4-211ENST00000498534 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
CNOT4-211ENST00000498534 LINC00643Q86TS7 51 aa4.84□□□□□ -1.63
CNOT4-211ENST00000498534 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
CNOT4-211ENST00000498534 PCP4L1A6NKN8 68 aa4.8□□□□□ -1.64
CNOT4-211ENST00000498534 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
CNOT4-211ENST00000498534 H3BPC8 53 aa4.79□□□□□ -1.64
CNOT4-211ENST00000498534 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
CNOT4-211ENST00000498534 DMAC1Q96GE9 116 aa4.79□□□□□ -1.64
CNOT4-211ENST00000498534 MT-ATP8P03928 68 aa4.76□□□□□ -1.65
CNOT4-211ENST00000498534 TRAV7A0A075B6U4 112 aa4.72□□□□□ -1.65
CNOT4-211ENST00000498534 SCGB1A1P11684 91 aa4.71□□□□□ -1.66
CNOT4-211ENST00000498534 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
CNOT4-211ENST00000498534 ACYP2P14621 99 aa4.69□□□□□ -1.66
CNOT4-211ENST00000498534 GPR98Q8WXG9 6306 aa4.65□□□□□ -1.66
CNOT4-211ENST00000498534 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
CNOT4-211ENST00000498534 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
CNOT4-211ENST00000498534 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
CNOT4-211ENST00000498534 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
CNOT4-211ENST00000498534 J3QR89 54 aa4.58□□□□□ -1.68
CNOT4-211ENST00000498534 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
CNOT4-211ENST00000498534 MT3P25713 68 aa4.52□□□□□ -1.69
CNOT4-211ENST00000498534 SMIM20Q8N5G0 67 aa4.51□□□□□ -1.69
CNOT4-211ENST00000498534 PCP4P48539 62 aa4.5□□□□□ -1.69
CNOT4-211ENST00000498534 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
CNOT4-211ENST00000498534 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
CNOT4-211ENST00000498534 A0A1B0GV90 55 aa4.49□□□□□ -1.69
CNOT4-211ENST00000498534 MT1EP04732 61 aa4.48□□□□□ -1.69
CNOT4-211ENST00000498534 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
CNOT4-211ENST00000498534 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CNOT4-211ENST00000498534 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
CNOT4-211ENST00000498534 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
CNOT4-211ENST00000498534 SNURFQ9Y675 71 aa4.42□□□□□ -1.7
CNOT4-211ENST00000498534 SPANXA2-OT1Q8N9U9 137 aa4.41□□□□□ -1.7
CNOT4-211ENST00000498534 A0A0D9SG42 100 aa4.4□□□□□ -1.71
CNOT4-211ENST00000498534 MT1GP13640 62 aa4.4□□□□□ -1.71
CNOT4-211ENST00000498534 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
CNOT4-211ENST00000498534 SEC61GP60059 68 aa4.37□□□□□ -1.71
CNOT4-211ENST00000498534 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
CNOT4-211ENST00000498534 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
CNOT4-211ENST00000498534 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
CNOT4-211ENST00000498534 MT4P47944 62 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms