RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 A8MUN3 132 aa4.85□□□□□ -1.63
CDK9-205ENST00000498339 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
CDK9-205ENST00000498339 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
CDK9-205ENST00000498339 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
CDK9-205ENST00000498339 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
CDK9-205ENST00000498339 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
CDK9-205ENST00000498339 A0A087WVE0 104 aa4.79□□□□□ -1.64
CDK9-205ENST00000498339 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
CDK9-205ENST00000498339 M0R143 59 aa4.77□□□□□ -1.65
CDK9-205ENST00000498339 TSTD3H0UI37 97 aa4.76□□□□□ -1.65
CDK9-205ENST00000498339 H0YAA0 97 aa4.75□□□□□ -1.65
CDK9-205ENST00000498339 NDUFC1O43677 76 aa4.75□□□□□ -1.65
CDK9-205ENST00000498339 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
CDK9-205ENST00000498339 TP53AIP1Q9HCN2 124 aa4.72□□□□□ -1.65
CDK9-205ENST00000498339 H3BT86 120 aa4.7□□□□□ -1.66
CDK9-205ENST00000498339 K7EP34 96 aa4.69□□□□□ -1.66
CDK9-205ENST00000498339 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
CDK9-205ENST00000498339 R4GN34 69 aa4.69□□□□□ -1.66
CDK9-205ENST00000498339 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
CDK9-205ENST00000498339 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
CDK9-205ENST00000498339 UBL5Q9BZL1 73 aa4.67□□□□□ -1.66
CDK9-205ENST00000498339 C9orf118A6NHY6 69 aa4.63□□□□□ -1.67
CDK9-205ENST00000498339 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
CDK9-205ENST00000498339 M0QZ58 72 aa4.63□□□□□ -1.67
CDK9-205ENST00000498339 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
CDK9-205ENST00000498339 BATFQ16520 125 aa4.62□□□□□ -1.67
CDK9-205ENST00000498339 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
CDK9-205ENST00000498339 TAX1BP3O14907 124 aa4.61□□□□□ -1.67
CDK9-205ENST00000498339 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
CDK9-205ENST00000498339 TRAV22A0A0B4J277 110 aa4.6□□□□□ -1.67
CDK9-205ENST00000498339 A0A1W2PPM0 123 aa4.6□□□□□ -1.67
CDK9-205ENST00000498339 ACYP1P07311 99 aa4.59□□□□□ -1.67
CDK9-205ENST00000498339 C20orf197Q8N268 126 aa4.58□□□□□ -1.68
CDK9-205ENST00000498339 P0C880 135 aa4.56□□□□□ -1.68
CDK9-205ENST00000498339 SPCS1Q9Y6A9 102 aa4.56□□□□□ -1.68
CDK9-205ENST00000498339 COL5A1-AS1Q5SY13 56 aa4.52□□□□□ -1.69
CDK9-205ENST00000498339 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
CDK9-205ENST00000498339 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
CDK9-205ENST00000498339 AHNAK2Q8IVF2 5795 aa4.5□□□□□ -1.69
CDK9-205ENST00000498339 H0Y9P7 68 aa4.48□□□□□ -1.69
CDK9-205ENST00000498339 PRO0461Q9UI25 63 aa4.48□□□□□ -1.69
CDK9-205ENST00000498339 ATOX1O00244 68 aa4.47□□□□□ -1.69
CDK9-205ENST00000498339 MT-ATP8P03928 68 aa4.45□□□□□ -1.7
CDK9-205ENST00000498339 MT4P47944 62 aa4.45□□□□□ -1.7
CDK9-205ENST00000498339 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
CDK9-205ENST00000498339 UQCRQO14949 82 aa4.42□□□□□ -1.7
CDK9-205ENST00000498339 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
CDK9-205ENST00000498339 A0A1B0GV90 55 aa4.41□□□□□ -1.7
CDK9-205ENST00000498339 F8W1H4 67 aa4.41□□□□□ -1.7
CDK9-205ENST00000498339 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
CDK9-205ENST00000498339 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
CDK9-205ENST00000498339 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
CDK9-205ENST00000498339 CYSTM1Q9H1C7 97 aa4.38□□□□□ -1.71
CDK9-205ENST00000498339 MT1EP04732 61 aa4.36□□□□□ -1.71
CDK9-205ENST00000498339 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
CDK9-205ENST00000498339 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
CDK9-205ENST00000498339 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
CDK9-205ENST00000498339 ETDBQ3ZM63 59 aa4.35□□□□□ -1.71
CDK9-205ENST00000498339 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
CDK9-205ENST00000498339 MP68P56378 58 aa4.29□□□□□ -1.72
CDK9-205ENST00000498339 FAM240AA0A1B0GVK7 77 aa4.28□□□□□ -1.72
CDK9-205ENST00000498339 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
CDK9-205ENST00000498339 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
CDK9-205ENST00000498339 ATP5EP2Q5VTU8 51 aa4.25□□□□□ -1.73
CDK9-205ENST00000498339 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
CDK9-205ENST00000498339 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
CDK9-205ENST00000498339 MT1GP13640 62 aa4.24□□□□□ -1.73
CDK9-205ENST00000498339 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
CDK9-205ENST00000498339 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
CDK9-205ENST00000498339 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
CDK9-205ENST00000498339 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
CDK9-205ENST00000498339 LINC00643Q86TS7 51 aa4.18□□□□□ -1.74
CDK9-205ENST00000498339 MT1MQ8N339 61 aa4.18□□□□□ -1.74
CDK9-205ENST00000498339 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
CDK9-205ENST00000498339 SPTSSBQ8NFR3 76 aa4.16□□□□□ -1.74
CDK9-205ENST00000498339 TRAV7A0A075B6U4 112 aa4.15□□□□□ -1.75
CDK9-205ENST00000498339 OCR1Q9BZK8 76 aa4.15□□□□□ -1.75
CDK9-205ENST00000498339 A0A0D9SG42 100 aa4.14□□□□□ -1.75
CDK9-205ENST00000498339 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
CDK9-205ENST00000498339 H3BPC8 53 aa4.11□□□□□ -1.75
CDK9-205ENST00000498339 K7ERU9 68 aa4.11□□□□□ -1.75
CDK9-205ENST00000498339 J3QR89 54 aa4.1□□□□□ -1.75
CDK9-205ENST00000498339 ACYP2P14621 99 aa4.1□□□□□ -1.75
CDK9-205ENST00000498339 PCP4P48539 62 aa4.1□□□□□ -1.75
CDK9-205ENST00000498339 MT1LQ93083 61 aa4.09□□□□□ -1.75
CDK9-205ENST00000498339 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
CDK9-205ENST00000498339 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
CDK9-205ENST00000498339 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CDK9-205ENST00000498339 SCGB1A1P11684 91 aa4□□□□□ -1.77
CDK9-205ENST00000498339 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
CDK9-205ENST00000498339 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
CDK9-205ENST00000498339 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
CDK9-205ENST00000498339 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
CDK9-205ENST00000498339 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
CDK9-205ENST00000498339 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
CDK9-205ENST00000498339 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
CDK9-205ENST00000498339 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
CDK9-205ENST00000498339 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
CDK9-205ENST00000498339 SEC61GP60059 68 aa3.82□□□□□ -1.8
CDK9-205ENST00000498339 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms