RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 KIAA1109Q2LD37 5005 aa10.38□□□□□ -0.75
NKX2-1-202ENST00000498187 K7ERS5 55 aa10.36□□□□□ -0.75
NKX2-1-202ENST00000498187 RYR1P21817 5038 aa10.36□□□□□ -0.75
NKX2-1-202ENST00000498187 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
NKX2-1-202ENST00000498187 KRTAP17-1Q9BYP8 105 aa10.26□□□□□ -0.77
NKX2-1-202ENST00000498187 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
NKX2-1-202ENST00000498187 TNXBP22105 4242 aa10.23□□□□□ -0.77
NKX2-1-202ENST00000498187 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
NKX2-1-202ENST00000498187 Q5VSD8 79 aa10.22□□□□□ -0.77
NKX2-1-202ENST00000498187 RPL37P61927 97 aaKnown RBP10.17□□□□□ -0.78
NKX2-1-202ENST00000498187 KRTAP10-6P60371 365 aaPredicted RBP10.12□□□□□ -0.79
NKX2-1-202ENST00000498187 ROMO1P60602 79 aa10.12□□□□□ -0.79
NKX2-1-202ENST00000498187 XP32Q5T750 250 aa10.12□□□□□ -0.79
NKX2-1-202ENST00000498187 KRTAP3-3Q9BYR6 98 aa10.11□□□□□ -0.79
NKX2-1-202ENST00000498187 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
NKX2-1-202ENST00000498187 BIRC6Q9NR09 4857 aa10.07□□□□□ -0.8
NKX2-1-202ENST00000498187 DMBT1Q9UGM3 2413 aaPredicted RBP10.07□□□□□ -0.8
NKX2-1-202ENST00000498187 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
NKX2-1-202ENST00000498187 S4R3F8 94 aa10.02□□□□□ -0.8
NKX2-1-202ENST00000498187 KRTAP13-4Q3LI77 160 aa10.02□□□□□ -0.81
NKX2-1-202ENST00000498187 KRTAP3-2Q9BYR7 98 aa10.01□□□□□ -0.81
NKX2-1-202ENST00000498187 A0A0D9SG42 100 aa9.99□□□□□ -0.81
NKX2-1-202ENST00000498187 KRTAP4-5Q9BYR2 181 aa9.99□□□□□ -0.81
NKX2-1-202ENST00000498187 ABCA13Q86UQ4 5058 aa9.94□□□□□ -0.82
NKX2-1-202ENST00000498187 MT1HL1P0DM35 61 aa9.93□□□□□ -0.82
NKX2-1-202ENST00000498187 HERC2O95714 4834 aa9.92□□□□□ -0.82
NKX2-1-202ENST00000498187 P0C880 135 aa9.87□□□□□ -0.83
NKX2-1-202ENST00000498187 TPRXLQ17RH7 258 aa9.83□□□□□ -0.84
NKX2-1-202ENST00000498187 SPINT4Q6UDR6 99 aa9.74□□□□□ -0.85
NKX2-1-202ENST00000498187 KRTAP12-2P59991 146 aa9.73□□□□□ -0.85
NKX2-1-202ENST00000498187 LPAP08519 4548 aa9.72□□□□□ -0.85
NKX2-1-202ENST00000498187 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
NKX2-1-202ENST00000498187 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
NKX2-1-202ENST00000498187 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
NKX2-1-202ENST00000498187 LRP2P98164 4655 aa9.66□□□□□ -0.86
NKX2-1-202ENST00000498187 M0QZ58 72 aa9.64□□□□□ -0.87
NKX2-1-202ENST00000498187 J3QL48 77 aa9.51□□□□□ -0.89
NKX2-1-202ENST00000498187 KRTAP15-1Q3LI76 137 aa9.5□□□□□ -0.89
NKX2-1-202ENST00000498187 NDUFAF8A1L188 74 aa9.48□□□□□ -0.89
NKX2-1-202ENST00000498187 HERC1Q15751 4861 aa9.46□□□□□ -0.9
NKX2-1-202ENST00000498187 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
NKX2-1-202ENST00000498187 R4GN34 69 aa9.33□□□□□ -0.92
NKX2-1-202ENST00000498187 LUZP6Q538Z0 58 aa9.27□□□□□ -0.92
NKX2-1-202ENST00000498187 MUC17Q685J3 4493 aa9.27□□□□□ -0.92
NKX2-1-202ENST00000498187 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
NKX2-1-202ENST00000498187 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.94
NKX2-1-202ENST00000498187 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
NKX2-1-202ENST00000498187 KRTAP19-2Q3LHN2 52 aa9.08□□□□□ -0.96
NKX2-1-202ENST00000498187 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
NKX2-1-202ENST00000498187 MUC2Q02817 5179 aa8.97□□□□□ -0.97
NKX2-1-202ENST00000498187 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
NKX2-1-202ENST00000498187 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
NKX2-1-202ENST00000498187 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
NKX2-1-202ENST00000498187 RNF213Q63HN8 5207 aa8.8□□□□□ -1
NKX2-1-202ENST00000498187 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
NKX2-1-202ENST00000498187 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
NKX2-1-202ENST00000498187 TNP1P09430 55 aa8.6□□□□□ -1.03
NKX2-1-202ENST00000498187 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.04
NKX2-1-202ENST00000498187 KRTAP23-1A1A580 65 aa8.57□□□□□ -1.04
NKX2-1-202ENST00000498187 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
NKX2-1-202ENST00000498187 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
NKX2-1-202ENST00000498187 SPRR5A0A1B0GTR4 108 aa8.35□□□□□ -1.07
NKX2-1-202ENST00000498187 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
NKX2-1-202ENST00000498187 M0R2T5 61 aa8.34□□□□□ -1.08
NKX2-1-202ENST00000498187 MT1HP80294 61 aa8.3□□□□□ -1.08
NKX2-1-202ENST00000498187 MT1FP04733 61 aa8.18□□□□□ -1.1
NKX2-1-202ENST00000498187 MT2AP02795 61 aa8.18□□□□□ -1.1
NKX2-1-202ENST00000498187 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
NKX2-1-202ENST00000498187 KRTAP9-8Q9BYQ0 159 aa8.11□□□□□ -1.11
NKX2-1-202ENST00000498187 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
NKX2-1-202ENST00000498187 KRTAP19-8Q3LI54 63 aa8□□□□□ -1.13
NKX2-1-202ENST00000498187 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
NKX2-1-202ENST00000498187 LCE2AQ5TA79 106 aaPredicted RBP7.97□□□□□ -1.13
NKX2-1-202ENST00000498187 MT1BP07438 61 aa7.91□□□□□ -1.14
NKX2-1-202ENST00000498187 KRTAP8-1Q8IUC2 63 aa7.89□□□□□ -1.15
NKX2-1-202ENST00000498187 KRTAP10-5P60370 271 aa7.88□□□□□ -1.15
NKX2-1-202ENST00000498187 MT1XP80297 61 aa7.86□□□□□ -1.15
NKX2-1-202ENST00000498187 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
NKX2-1-202ENST00000498187 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
NKX2-1-202ENST00000498187 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
NKX2-1-202ENST00000498187 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
NKX2-1-202ENST00000498187 INE1O15225 51 aa7.59□□□□□ -1.19
NKX2-1-202ENST00000498187 USH2AO75445 5202 aa7.49□□□□□ -1.21
NKX2-1-202ENST00000498187 LCE2BO14633 110 aa7.47□□□□□ -1.21
NKX2-1-202ENST00000498187 FSIP2Q5CZC0 6907 aa7.39□□□□□ -1.23
NKX2-1-202ENST00000498187 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
NKX2-1-202ENST00000498187 LCE3CQ5T5A8 94 aa7.26□□□□□ -1.25
NKX2-1-202ENST00000498187 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
NKX2-1-202ENST00000498187 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
NKX2-1-202ENST00000498187 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
NKX2-1-202ENST00000498187 KMT2DO14686 5537 aa7.17□□□□□ -1.26
NKX2-1-202ENST00000498187 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
NKX2-1-202ENST00000498187 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
NKX2-1-202ENST00000498187 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
NKX2-1-202ENST00000498187 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
NKX2-1-202ENST00000498187 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
NKX2-1-202ENST00000498187 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
NKX2-1-202ENST00000498187 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
NKX2-1-202ENST00000498187 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
NKX2-1-202ENST00000498187 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms