RNA–Protein interactions for RNA: ENST00000497844.6

SPIRE1-210, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5

Gene SPIRE1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-210ENST00000497844 LINC00304Q8N9R0 145 aa3.22□□□□□ -1.89
SPIRE1-210ENST00000497844 Q96NJ1 140 aa3.22□□□□□ -1.89
SPIRE1-210ENST00000497844 KRTAP10-8P60410 259 aa3.21□□□□□ -1.9
SPIRE1-210ENST00000497844 PRR26Q8N8Z3 221 aa3.21□□□□□ -1.9
SPIRE1-210ENST00000497844 APOBP04114 4563 aaKnown RBP3.21□□□□□ -1.9
SPIRE1-210ENST00000497844 SRRM2Q9UQ35 2752 aaKnown RBP3.21□□□□□ -1.9
SPIRE1-210ENST00000497844 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
SPIRE1-210ENST00000497844 A0A0G2JQZ4 141 aa3.2□□□□□ -1.9
SPIRE1-210ENST00000497844 HRES1P13985 223 aa3.2□□□□□ -1.9
SPIRE1-210ENST00000497844 DMAC1Q96GE9 116 aa3.2□□□□□ -1.9
SPIRE1-210ENST00000497844 A0A1B0GU69 56 aa3.19□□□□□ -1.9
SPIRE1-210ENST00000497844 IGKV2D-30A0A075B6S6 120 aa3.17□□□□□ -1.9
SPIRE1-210ENST00000497844 UQCR11O14957 56 aa3.17□□□□□ -1.9
SPIRE1-210ENST00000497844 RYR3Q15413 4870 aa3.17□□□□□ -1.9
SPIRE1-210ENST00000497844 LINC00313P59037 77 aa3.16□□□□□ -1.9
SPIRE1-210ENST00000497844 HSPG2P98160 4391 aa3.16□□□□□ -1.9
SPIRE1-210ENST00000497844 FAT1Q14517 4588 aa3.15□□□□□ -1.9
SPIRE1-210ENST00000497844 SPINK7P58062 85 aa3.15□□□□□ -1.91
SPIRE1-210ENST00000497844 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
SPIRE1-210ENST00000497844 RETNLBQ9BQ08 111 aa3.15□□□□□ -1.91
SPIRE1-210ENST00000497844 RYR1P21817 5038 aa3.14□□□□□ -1.91
SPIRE1-210ENST00000497844 A8MU10 97 aa3.13□□□□□ -1.91
SPIRE1-210ENST00000497844 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
SPIRE1-210ENST00000497844 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
SPIRE1-210ENST00000497844 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
SPIRE1-210ENST00000497844 DMBT1Q9UGM3 2413 aaPredicted RBP3.12□□□□□ -1.91
SPIRE1-210ENST00000497844 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
SPIRE1-210ENST00000497844 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
SPIRE1-210ENST00000497844 FLG2Q5D862 2391 aaPredicted RBP3.11□□□□□ -1.91
SPIRE1-210ENST00000497844 Q5W150 140 aa3.11□□□□□ -1.91
SPIRE1-210ENST00000497844 KRTAP16-1A8MUX0 517 aa3.09□□□□□ -1.91
SPIRE1-210ENST00000497844 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
SPIRE1-210ENST00000497844 A8MUU9 505 aa3.08□□□□□ -1.92
SPIRE1-210ENST00000497844 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
SPIRE1-210ENST00000497844 TNXBP22105 4242 aa3.08□□□□□ -1.92
SPIRE1-210ENST00000497844 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
SPIRE1-210ENST00000497844 TPRXLQ17RH7 258 aa3.06□□□□□ -1.92
SPIRE1-210ENST00000497844 K7ERS5 55 aa3.05□□□□□ -1.92
SPIRE1-210ENST00000497844 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
SPIRE1-210ENST00000497844 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
SPIRE1-210ENST00000497844 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
SPIRE1-210ENST00000497844 FAT3Q8TDW7 4589 aa3.02□□□□□ -1.93
SPIRE1-210ENST00000497844 LRP1Q07954 4544 aaKnown RBP3.02□□□□□ -1.93
SPIRE1-210ENST00000497844 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
SPIRE1-210ENST00000497844 SEC61BP60468 96 aaKnown RBP3□□□□□ -1.93
SPIRE1-210ENST00000497844 RPL37P61927 97 aaKnown RBP3□□□□□ -1.93
SPIRE1-210ENST00000497844 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
SPIRE1-210ENST00000497844 C9orf92A6NGG3 77 aa2.98□□□□□ -1.93
SPIRE1-210ENST00000497844 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
SPIRE1-210ENST00000497844 HERC2O95714 4834 aa2.98□□□□□ -1.93
SPIRE1-210ENST00000497844 A0A1B0GU33 70 aa2.95□□□□□ -1.94
SPIRE1-210ENST00000497844 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
SPIRE1-210ENST00000497844 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
SPIRE1-210ENST00000497844 H1FX-AS1Q4G0G2 97 aa2.93□□□□□ -1.94
SPIRE1-210ENST00000497844 H0YAA0 97 aa2.91□□□□□ -1.94
SPIRE1-210ENST00000497844 COX6B2Q6YFQ2 88 aa2.91□□□□□ -1.94
SPIRE1-210ENST00000497844 MT3P25713 68 aa2.9□□□□□ -1.95
SPIRE1-210ENST00000497844 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
SPIRE1-210ENST00000497844 ROMO1P60602 79 aa2.9□□□□□ -1.95
SPIRE1-210ENST00000497844 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
SPIRE1-210ENST00000497844 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
SPIRE1-210ENST00000497844 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
SPIRE1-210ENST00000497844 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SPIRE1-210ENST00000497844 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
SPIRE1-210ENST00000497844 LRP2P98164 4655 aa2.81□□□□□ -1.96
SPIRE1-210ENST00000497844 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
SPIRE1-210ENST00000497844 CRIPTQ9P021 101 aa2.79□□□□□ -1.96
SPIRE1-210ENST00000497844 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
SPIRE1-210ENST00000497844 S4R3F8 94 aa2.78□□□□□ -1.96
SPIRE1-210ENST00000497844 LPAP08519 4548 aa2.76□□□□□ -1.97
SPIRE1-210ENST00000497844 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
SPIRE1-210ENST00000497844 M0QZ58 72 aa2.74□□□□□ -1.97
SPIRE1-210ENST00000497844 KRTAP19-2Q3LHN2 52 aa2.74□□□□□ -1.97
SPIRE1-210ENST00000497844 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
SPIRE1-210ENST00000497844 HERC1Q15751 4861 aa2.74□□□□□ -1.97
SPIRE1-210ENST00000497844 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
SPIRE1-210ENST00000497844 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SPIRE1-210ENST00000497844 FLGP20930 4061 aaPredicted RBP2.69□□□□□ -1.98
SPIRE1-210ENST00000497844 A0A0D9SG42 100 aa2.69□□□□□ -1.98
SPIRE1-210ENST00000497844 P0C880 135 aa2.69□□□□□ -1.98
SPIRE1-210ENST00000497844 KRTAP13-4Q3LI77 160 aa2.65□□□□□ -1.99
SPIRE1-210ENST00000497844 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
SPIRE1-210ENST00000497844 KRTAP12-1P59990 96 aa2.63□□□□□ -1.99
SPIRE1-210ENST00000497844 KRTAP10-12P60413 245 aa2.63□□□□□ -1.99
SPIRE1-210ENST00000497844 PP632Q6XCG6 107 aa2.63□□□□□ -1.99
SPIRE1-210ENST00000497844 MUC2Q02817 5179 aa2.62□□□□□ -1.99
SPIRE1-210ENST00000497844 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
SPIRE1-210ENST00000497844 MT1HP80294 61 aa2.62□□□□□ -1.99
SPIRE1-210ENST00000497844 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
SPIRE1-210ENST00000497844 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
SPIRE1-210ENST00000497844 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
SPIRE1-210ENST00000497844 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
SPIRE1-210ENST00000497844 M0R2T5 61 aa2.58□□□□□ -2
SPIRE1-210ENST00000497844 R4GN34 69 aa2.58□□□□□ -2
SPIRE1-210ENST00000497844 RNF213Q63HN8 5207 aa2.55□□□□□ -2
SPIRE1-210ENST00000497844 PLAC4Q8WY50 150 aa2.55□□□□□ -2
SPIRE1-210ENST00000497844 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
SPIRE1-210ENST00000497844 SPRR2GQ9BYE4 73 aa2.53□□□□□ -2
SPIRE1-210ENST00000497844 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
SPIRE1-210ENST00000497844 MT2AP02795 61 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms