RNA–Protein interactions for RNA: ENST00000497019.6

NTRK1-205, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 2

Gene NTRK1, Length 2,508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-205ENST00000497019 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
NTRK1-205ENST00000497019 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
NTRK1-205ENST00000497019 RYR3Q15413 4870 aa9.44□□□□□ -0.9
NTRK1-205ENST00000497019 RYR2Q92736 4967 aa9.43□□□□□ -0.9
NTRK1-205ENST00000497019 KRTAP13-4Q3LI77 160 aa9.43□□□□□ -0.9
NTRK1-205ENST00000497019 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
NTRK1-205ENST00000497019 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.91
NTRK1-205ENST00000497019 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
NTRK1-205ENST00000497019 P0C880 135 aa9.34□□□□□ -0.91
NTRK1-205ENST00000497019 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
NTRK1-205ENST00000497019 A0A0D9SG42 100 aa9.31□□□□□ -0.92
NTRK1-205ENST00000497019 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
NTRK1-205ENST00000497019 S4R3F8 94 aa9.3□□□□□ -0.92
NTRK1-205ENST00000497019 TNXBP22105 4242 aa9.3□□□□□ -0.92
NTRK1-205ENST00000497019 XP32Q5T750 250 aa9.28□□□□□ -0.92
NTRK1-205ENST00000497019 LRP1Q07954 4544 aaKnown RBP9.28□□□□□ -0.92
NTRK1-205ENST00000497019 HSPG2P98160 4391 aa9.27□□□□□ -0.93
NTRK1-205ENST00000497019 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.94
NTRK1-205ENST00000497019 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.94
NTRK1-205ENST00000497019 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
NTRK1-205ENST00000497019 Q5VSD8 79 aa9.14□□□□□ -0.95
NTRK1-205ENST00000497019 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
NTRK1-205ENST00000497019 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
NTRK1-205ENST00000497019 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
NTRK1-205ENST00000497019 KRTAP15-1Q3LI76 137 aa9.06□□□□□ -0.96
NTRK1-205ENST00000497019 KIAA1109Q2LD37 5005 aa9.04□□□□□ -0.96
NTRK1-205ENST00000497019 MT1HL1P0DM35 61 aa8.98□□□□□ -0.97
NTRK1-205ENST00000497019 KRTAP17-1Q9BYP8 105 aa8.98□□□□□ -0.97
NTRK1-205ENST00000497019 M0QZ58 72 aa8.96□□□□□ -0.97
NTRK1-205ENST00000497019 RYR1P21817 5038 aa8.92□□□□□ -0.98
NTRK1-205ENST00000497019 LPAP08519 4548 aa8.88□□□□□ -0.99
NTRK1-205ENST00000497019 NDUFAF8A1L188 74 aa8.87□□□□□ -0.99
NTRK1-205ENST00000497019 LRP2P98164 4655 aa8.82□□□□□ -1
NTRK1-205ENST00000497019 R4GN34 69 aa8.63□□□□□ -1.03
NTRK1-205ENST00000497019 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
NTRK1-205ENST00000497019 KRTAP4-5Q9BYR2 181 aa8.6□□□□□ -1.03
NTRK1-205ENST00000497019 BIRC6Q9NR09 4857 aa8.54□□□□□ -1.04
NTRK1-205ENST00000497019 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
NTRK1-205ENST00000497019 SEC61BP60468 96 aaKnown RBP8.49□□□□□ -1.05
NTRK1-205ENST00000497019 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
NTRK1-205ENST00000497019 HERC2O95714 4834 aa8.46□□□□□ -1.05
NTRK1-205ENST00000497019 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
NTRK1-205ENST00000497019 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
NTRK1-205ENST00000497019 KRTAP4-1Q9BYQ7 146 aa8.42□□□□□ -1.06
NTRK1-205ENST00000497019 A0A0A0MQY5 61 aa8.37□□□□□ -1.07
NTRK1-205ENST00000497019 KRTAP19-2Q3LHN2 52 aa8.35□□□□□ -1.07
NTRK1-205ENST00000497019 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
NTRK1-205ENST00000497019 HERC1Q15751 4861 aa8.28□□□□□ -1.08
NTRK1-205ENST00000497019 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
NTRK1-205ENST00000497019 J3QL48 77 aa8.13□□□□□ -1.11
NTRK1-205ENST00000497019 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
NTRK1-205ENST00000497019 MUC2Q02817 5179 aa8.06□□□□□ -1.12
NTRK1-205ENST00000497019 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
NTRK1-205ENST00000497019 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
NTRK1-205ENST00000497019 TNP1P09430 55 aa7.98□□□□□ -1.13
NTRK1-205ENST00000497019 SPRR5A0A1B0GTR4 108 aa7.94□□□□□ -1.14
NTRK1-205ENST00000497019 HMCN2Q8NDA2 5059 aa7.89□□□□□ -1.15
NTRK1-205ENST00000497019 RNF213Q63HN8 5207 aa7.88□□□□□ -1.15
NTRK1-205ENST00000497019 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
NTRK1-205ENST00000497019 SPRR2GQ9BYE4 73 aa7.74□□□□□ -1.17
NTRK1-205ENST00000497019 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
NTRK1-205ENST00000497019 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
NTRK1-205ENST00000497019 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
NTRK1-205ENST00000497019 LCE3AQ5TA76 89 aa7.52□□□□□ -1.21
NTRK1-205ENST00000497019 M0R2T5 61 aa7.49□□□□□ -1.21
NTRK1-205ENST00000497019 MT1HP80294 61 aa7.48□□□□□ -1.21
NTRK1-205ENST00000497019 MT1FP04733 61 aa7.44□□□□□ -1.22
NTRK1-205ENST00000497019 MT2AP02795 61 aa7.43□□□□□ -1.22
NTRK1-205ENST00000497019 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
NTRK1-205ENST00000497019 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
NTRK1-205ENST00000497019 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
NTRK1-205ENST00000497019 KRTAP19-8Q3LI54 63 aa7.37□□□□□ -1.23
NTRK1-205ENST00000497019 KRTAP10-5P60370 271 aa7.27□□□□□ -1.25
NTRK1-205ENST00000497019 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
NTRK1-205ENST00000497019 MT1BP07438 61 aa7.26□□□□□ -1.25
NTRK1-205ENST00000497019 MT1XP80297 61 aa7.25□□□□□ -1.25
NTRK1-205ENST00000497019 INE1O15225 51 aa7.2□□□□□ -1.26
NTRK1-205ENST00000497019 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
NTRK1-205ENST00000497019 KRTAP10-12P60413 245 aa7.15□□□□□ -1.27
NTRK1-205ENST00000497019 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
NTRK1-205ENST00000497019 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
NTRK1-205ENST00000497019 USH2AO75445 5202 aa6.81□□□□□ -1.32
NTRK1-205ENST00000497019 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
NTRK1-205ENST00000497019 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
NTRK1-205ENST00000497019 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
NTRK1-205ENST00000497019 LCE2BO14633 110 aa6.73□□□□□ -1.33
NTRK1-205ENST00000497019 LCE2AQ5TA79 106 aaPredicted RBP6.64□□□□□ -1.35
NTRK1-205ENST00000497019 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
NTRK1-205ENST00000497019 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
NTRK1-205ENST00000497019 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
NTRK1-205ENST00000497019 KMT2DO14686 5537 aa6.51□□□□□ -1.37
NTRK1-205ENST00000497019 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
NTRK1-205ENST00000497019 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
NTRK1-205ENST00000497019 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
NTRK1-205ENST00000497019 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.37
NTRK1-205ENST00000497019 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
NTRK1-205ENST00000497019 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
NTRK1-205ENST00000497019 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
NTRK1-205ENST00000497019 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
NTRK1-205ENST00000497019 MT1LQ93083 61 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms