RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
PDE6B-212ENST00000496514 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.35
PDE6B-212ENST00000496514 EPPK1P58107 5090 aaKnown RBP6.64□□□□□ -1.35
PDE6B-212ENST00000496514 TNXBP22105 4242 aa6.63□□□□□ -1.35
PDE6B-212ENST00000496514 RYR1P21817 5038 aa6.63□□□□□ -1.35
PDE6B-212ENST00000496514 A8MUU9 505 aa6.61□□□□□ -1.35
PDE6B-212ENST00000496514 SPINT4Q6UDR6 99 aa6.61□□□□□ -1.35
PDE6B-212ENST00000496514 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
PDE6B-212ENST00000496514 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
PDE6B-212ENST00000496514 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
PDE6B-212ENST00000496514 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
PDE6B-212ENST00000496514 LPAP08519 4548 aa6.52□□□□□ -1.37
PDE6B-212ENST00000496514 ABCA13Q86UQ4 5058 aa6.47□□□□□ -1.37
PDE6B-212ENST00000496514 LRP2P98164 4655 aa6.47□□□□□ -1.37
PDE6B-212ENST00000496514 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
PDE6B-212ENST00000496514 XP32Q5T750 250 aa6.44□□□□□ -1.38
PDE6B-212ENST00000496514 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
PDE6B-212ENST00000496514 LUZP6Q538Z0 58 aa6.4□□□□□ -1.39
PDE6B-212ENST00000496514 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
PDE6B-212ENST00000496514 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
PDE6B-212ENST00000496514 H0YAA0 97 aa6.32□□□□□ -1.4
PDE6B-212ENST00000496514 A0A1B0GU33 70 aa6.29□□□□□ -1.4
PDE6B-212ENST00000496514 KRTAP3-3Q9BYR6 98 aa6.26□□□□□ -1.41
PDE6B-212ENST00000496514 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
PDE6B-212ENST00000496514 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
PDE6B-212ENST00000496514 K7ERS5 55 aa6.24□□□□□ -1.41
PDE6B-212ENST00000496514 A0A0D9SG42 100 aa6.23□□□□□ -1.41
PDE6B-212ENST00000496514 S4R3F8 94 aa6.22□□□□□ -1.41
PDE6B-212ENST00000496514 HERC2O95714 4834 aa6.22□□□□□ -1.41
PDE6B-212ENST00000496514 MUC2Q02817 5179 aa6.18□□□□□ -1.42
PDE6B-212ENST00000496514 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
PDE6B-212ENST00000496514 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
PDE6B-212ENST00000496514 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
PDE6B-212ENST00000496514 KRTAP10-6P60371 365 aaPredicted RBP6.16□□□□□ -1.42
PDE6B-212ENST00000496514 J3QL48 77 aa6.14□□□□□ -1.43
PDE6B-212ENST00000496514 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
PDE6B-212ENST00000496514 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
PDE6B-212ENST00000496514 HERC1Q15751 4861 aa6.05□□□□□ -1.44
PDE6B-212ENST00000496514 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
PDE6B-212ENST00000496514 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
PDE6B-212ENST00000496514 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
PDE6B-212ENST00000496514 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
PDE6B-212ENST00000496514 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
PDE6B-212ENST00000496514 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
PDE6B-212ENST00000496514 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
PDE6B-212ENST00000496514 M0QZ58 72 aa5.87□□□□□ -1.47
PDE6B-212ENST00000496514 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
PDE6B-212ENST00000496514 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
PDE6B-212ENST00000496514 R4GN34 69 aa5.82□□□□□ -1.48
PDE6B-212ENST00000496514 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
PDE6B-212ENST00000496514 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
PDE6B-212ENST00000496514 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
PDE6B-212ENST00000496514 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
PDE6B-212ENST00000496514 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
PDE6B-212ENST00000496514 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.5
PDE6B-212ENST00000496514 M0R2T5 61 aa5.56□□□□□ -1.52
PDE6B-212ENST00000496514 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
PDE6B-212ENST00000496514 LCE2CQ5TA81 110 aa5.52□□□□□ -1.53
PDE6B-212ENST00000496514 MT1HP80294 61 aa5.4□□□□□ -1.55
PDE6B-212ENST00000496514 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
PDE6B-212ENST00000496514 MT1FP04733 61 aa5.32□□□□□ -1.56
PDE6B-212ENST00000496514 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
PDE6B-212ENST00000496514 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
PDE6B-212ENST00000496514 MT2AP02795 61 aa5.28□□□□□ -1.56
PDE6B-212ENST00000496514 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
PDE6B-212ENST00000496514 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
PDE6B-212ENST00000496514 USH2AO75445 5202 aa5.21□□□□□ -1.58
PDE6B-212ENST00000496514 TNP1P09430 55 aa5.2□□□□□ -1.58
PDE6B-212ENST00000496514 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
PDE6B-212ENST00000496514 MT1BP07438 61 aa5.05□□□□□ -1.6
PDE6B-212ENST00000496514 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
PDE6B-212ENST00000496514 KMT2DO14686 5537 aa5.03□□□□□ -1.6
PDE6B-212ENST00000496514 LCE2BO14633 110 aa5.02□□□□□ -1.61
PDE6B-212ENST00000496514 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
PDE6B-212ENST00000496514 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
PDE6B-212ENST00000496514 MT1XP80297 61 aa4.98□□□□□ -1.61
PDE6B-212ENST00000496514 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
PDE6B-212ENST00000496514 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
PDE6B-212ENST00000496514 INE1O15225 51 aa4.94□□□□□ -1.62
PDE6B-212ENST00000496514 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
PDE6B-212ENST00000496514 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
PDE6B-212ENST00000496514 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
PDE6B-212ENST00000496514 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
PDE6B-212ENST00000496514 LCE2AQ5TA79 106 aaPredicted RBP4.81□□□□□ -1.64
PDE6B-212ENST00000496514 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
PDE6B-212ENST00000496514 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
PDE6B-212ENST00000496514 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
PDE6B-212ENST00000496514 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
PDE6B-212ENST00000496514 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
PDE6B-212ENST00000496514 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
PDE6B-212ENST00000496514 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
PDE6B-212ENST00000496514 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
PDE6B-212ENST00000496514 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
PDE6B-212ENST00000496514 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
PDE6B-212ENST00000496514 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
PDE6B-212ENST00000496514 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
PDE6B-212ENST00000496514 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
PDE6B-212ENST00000496514 MT1EP04732 61 aa4.3□□□□□ -1.72
PDE6B-212ENST00000496514 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
PDE6B-212ENST00000496514 MT1LQ93083 61 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms