RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	KLKP1	Q107X0	134 aa		4.91	□□□□□ -1.62
DCTN1-223	ENST00000495643	KRTAP19-8	Q3LI54	63 aa		4.91	□□□□□ -1.62
DCTN1-223	ENST00000495643	OCR1	Q9BZK8	76 aa		4.9	□□□□□ -1.63
DCTN1-223	ENST00000495643	MACF1	Q9UPN3	7388 aa	Known RBP	4.89	□□□□□ -1.63
DCTN1-223	ENST00000495643	LINC00208	Q96KT6	92 aa		4.89	□□□□□ -1.63
DCTN1-223	ENST00000495643		Q5VV11	94 aa		4.88	□□□□□ -1.63
DCTN1-223	ENST00000495643		A8MUN3	132 aa		4.86	□□□□□ -1.63
DCTN1-223	ENST00000495643	NDUFC1	O43677	76 aa		4.86	□□□□□ -1.63
DCTN1-223	ENST00000495643		J3QR89	54 aa		4.85	□□□□□ -1.63
DCTN1-223	ENST00000495643	IMUP	Q9GZP8	106 aa		4.85	□□□□□ -1.63
DCTN1-223	ENST00000495643	CRIPT	Q9P021	101 aa		4.85	□□□□□ -1.63
DCTN1-223	ENST00000495643		H0YAA0	97 aa		4.84	□□□□□ -1.63
DCTN1-223	ENST00000495643	MP68	P56378	58 aa		4.84	□□□□□ -1.63
DCTN1-223	ENST00000495643		A6NN06	94 aa		4.81	□□□□□ -1.64
DCTN1-223	ENST00000495643	KRTAP6-3	Q3LI67	103 aa		4.81	□□□□□ -1.64
DCTN1-223	ENST00000495643	SYNE2	Q8WXH0	6885 aa	Known RBP	4.81	□□□□□ -1.64
DCTN1-223	ENST00000495643		H3BPC8	53 aa		4.8	□□□□□ -1.64
DCTN1-223	ENST00000495643	KRTAP10-5	P60370	271 aa		4.8	□□□□□ -1.64
DCTN1-223	ENST00000495643	ADM2	Q7Z4H4	148 aa		4.77	□□□□□ -1.65
DCTN1-223	ENST00000495643	SCGB1A1	P11684	91 aa		4.76	□□□□□ -1.65
DCTN1-223	ENST00000495643	DMAC1	Q96GE9	116 aa		4.74	□□□□□ -1.65
DCTN1-223	ENST00000495643	MT-ATP8	P03928	68 aa		4.7	□□□□□ -1.66
DCTN1-223	ENST00000495643		K7ERU9	68 aa		4.68	□□□□□ -1.66
DCTN1-223	ENST00000495643		P0C880	135 aa		4.68	□□□□□ -1.66
DCTN1-223	ENST00000495643	TRAV7	A0A075B6U4	112 aa		4.66	□□□□□ -1.66
DCTN1-223	ENST00000495643	KRTAP3-2	Q9BYR7	98 aa		4.66	□□□□□ -1.66
DCTN1-223	ENST00000495643	SMIM20	Q8N5G0	67 aa		4.65	□□□□□ -1.67
DCTN1-223	ENST00000495643	C20orf197	Q8N268	126 aa		4.64	□□□□□ -1.67
DCTN1-223	ENST00000495643		R4GN34	69 aa		4.63	□□□□□ -1.67
DCTN1-223	ENST00000495643	MT1X	P80297	61 aa		4.62	□□□□□ -1.67
DCTN1-223	ENST00000495643	ACYP2	P14621	99 aa		4.61	□□□□□ -1.67
DCTN1-223	ENST00000495643	KRTAP5-9	P26371	169 aa		4.61	□□□□□ -1.67
DCTN1-223	ENST00000495643		M0QZ58	72 aa		4.6	□□□□□ -1.67
DCTN1-223	ENST00000495643	PLAC4	Q8WY50	150 aa		4.6	□□□□□ -1.67
DCTN1-223	ENST00000495643	PRO2289	Q9P1D8	64 aa		4.59	□□□□□ -1.67
DCTN1-223	ENST00000495643	MUC12	Q9UKN1	5478 aa		4.56	□□□□□ -1.68
DCTN1-223	ENST00000495643	SNURF	Q9Y675	71 aa		4.56	□□□□□ -1.68
DCTN1-223	ENST00000495643	NEB	P20929	6669 aa		4.55	□□□□□ -1.68
DCTN1-223	ENST00000495643	SPTSSB	Q8NFR3	76 aa		4.54	□□□□□ -1.68
DCTN1-223	ENST00000495643	LINC01554	Q52M75	96 aa		4.52	□□□□□ -1.69
DCTN1-223	ENST00000495643	KMT2D	O14686	5537 aa		4.52	□□□□□ -1.69
DCTN1-223	ENST00000495643	SPANXA2-OT1	Q8N9U9	137 aa		4.51	□□□□□ -1.69
DCTN1-223	ENST00000495643	CHKB-CPT1B	H3BT56	60 aa		4.5	□□□□□ -1.69
DCTN1-223	ENST00000495643	SERP2	Q8N6R1	65 aa		4.5	□□□□□ -1.69
DCTN1-223	ENST00000495643	KRTAP12-2	P59991	146 aa		4.49	□□□□□ -1.69
DCTN1-223	ENST00000495643	MDN1	Q9NU22	5596 aa		4.47	□□□□□ -1.69
DCTN1-223	ENST00000495643	SPRR2F	Q96RM1	72 aa		4.45	□□□□□ -1.7
DCTN1-223	ENST00000495643	KRTAP8-1	Q8IUC2	63 aa		4.43	□□□□□ -1.7
DCTN1-223	ENST00000495643	KRTAP20-1	Q3LI63	56 aa		4.42	□□□□□ -1.7
DCTN1-223	ENST00000495643	KRTAP4-8	A0A0G2JLE6	195 aa		4.41	□□□□□ -1.7
DCTN1-223	ENST00000495643	KRTAP4-8	Q9BYQ9	185 aa		4.41	□□□□□ -1.7
DCTN1-223	ENST00000495643	KRTAP10-7	P60409	375 aa	Predicted RBP	4.4	□□□□□ -1.71
DCTN1-223	ENST00000495643	KRTAP10-12	P60413	245 aa		4.38	□□□□□ -1.71
DCTN1-223	ENST00000495643	KRTAP13-4	Q3LI77	160 aa		4.38	□□□□□ -1.71
DCTN1-223	ENST00000495643	COX7C	P15954	63 aa		4.37	□□□□□ -1.71
DCTN1-223	ENST00000495643	SPRR2E	P22531	72 aa		4.37	□□□□□ -1.71
DCTN1-223	ENST00000495643	SPRR2B	P35325	72 aa		4.37	□□□□□ -1.71
DCTN1-223	ENST00000495643	SPRR2A	P35326	72 aa		4.37	□□□□□ -1.71
DCTN1-223	ENST00000495643	COA5	Q86WW8	74 aa		4.37	□□□□□ -1.71
DCTN1-223	ENST00000495643	LCE1A	Q5T7P2	110 aa		4.35	□□□□□ -1.71
DCTN1-223	ENST00000495643	KRTAP2-3	P0C7H8	128 aa		4.32	□□□□□ -1.72
DCTN1-223	ENST00000495643	KRTAP2-4	Q9BYR9	128 aa		4.32	□□□□□ -1.72
DCTN1-223	ENST00000495643	CYSTM1	Q9H1C7	97 aa		4.32	□□□□□ -1.72
DCTN1-223	ENST00000495643		H7BZZ5	65 aa		4.31	□□□□□ -1.72
DCTN1-223	ENST00000495643	SEC61G	P60059	68 aa		4.26	□□□□□ -1.73
DCTN1-223	ENST00000495643	SERP1	Q9Y6X1	66 aa		4.26	□□□□□ -1.73
DCTN1-223	ENST00000495643	CAMK2N1	Q7Z7J9	78 aa		4.25	□□□□□ -1.73
DCTN1-223	ENST00000495643	SPRR2D	P22532	72 aa		4.23	□□□□□ -1.73
DCTN1-223	ENST00000495643		A0A0D9SG42	100 aa		4.22	□□□□□ -1.73
DCTN1-223	ENST00000495643		A0A1B0GU33	70 aa		4.22	□□□□□ -1.73
DCTN1-223	ENST00000495643	SPATA8	Q6RVD6	105 aa		4.22	□□□□□ -1.73
DCTN1-223	ENST00000495643	ANAPC13	Q9BS18	74 aa		4.2	□□□□□ -1.74
DCTN1-223	ENST00000495643	KRTAP2-2	Q9BYT5	123 aa		4.19	□□□□□ -1.74
DCTN1-223	ENST00000495643	KRTAP2-1	Q9BYU5	128 aa		4.19	□□□□□ -1.74
DCTN1-223	ENST00000495643	KRTAP12-1	P59990	96 aa		4.16	□□□□□ -1.74
DCTN1-223	ENST00000495643	CCDC179	H3BU77	68 aa		4.14	□□□□□ -1.75
DCTN1-223	ENST00000495643	SPINT4	Q6UDR6	99 aa		4.14	□□□□□ -1.75
DCTN1-223	ENST00000495643		A0A1B0GU69	56 aa		4.13	□□□□□ -1.75
DCTN1-223	ENST00000495643	KRTAP19-7	Q3SYF9	63 aa		4.12	□□□□□ -1.75
DCTN1-223	ENST00000495643	LCE3B	Q5TA77	95 aa		4.12	□□□□□ -1.75
DCTN1-223	ENST00000495643	SMIM26	A0A096LP01	95 aa		4.09	□□□□□ -1.75
DCTN1-223	ENST00000495643	MT1E	P04732	61 aa		4.08	□□□□□ -1.76
DCTN1-223	ENST00000495643		A8MU10	97 aa		4.07	□□□□□ -1.76
DCTN1-223	ENST00000495643	ATP5E	P56381	51 aa	Predicted RBP	4.07	□□□□□ -1.76
DCTN1-223	ENST00000495643	LCE5A	Q5TCM9	118 aa		4.06	□□□□□ -1.76
DCTN1-223	ENST00000495643	KRTAP19-3	Q7Z4W3	81 aa		4.03	□□□□□ -1.76
DCTN1-223	ENST00000495643	KRTAP19-5	Q3LI72	72 aa		4.02	□□□□□ -1.77
DCTN1-223	ENST00000495643	PRR15L	Q9BU68	103 aa		4	□□□□□ -1.77
DCTN1-223	ENST00000495643	LINC01558	Q9Y6Z2	57 aa		4	□□□□□ -1.77
DCTN1-223	ENST00000495643	C10orf95	Q9H7T3	257 aa		3.98	□□□□□ -1.77
DCTN1-223	ENST00000495643	TMEM258	P61165	79 aa		3.96	□□□□□ -1.78
DCTN1-223	ENST00000495643	MT1G	P13640	62 aa		3.95	□□□□□ -1.78
DCTN1-223	ENST00000495643	TNP1	P09430	55 aa		3.94	□□□□□ -1.78
DCTN1-223	ENST00000495643	LCE3A	Q5TA76	89 aa		3.93	□□□□□ -1.78
DCTN1-223	ENST00000495643	MT1L	Q93083	61 aa		3.91	□□□□□ -1.78
DCTN1-223	ENST00000495643	DST	Q03001	7570 aa	Known RBP	3.91	□□□□□ -1.78
DCTN1-223	ENST00000495643	UQCR11	O14957	56 aa		3.89	□□□□□ -1.79
DCTN1-223	ENST00000495643	PP632	Q6XCG6	107 aa		3.89	□□□□□ -1.79
DCTN1-223	ENST00000495643	MT1M	Q8N339	61 aa		3.89	□□□□□ -1.79
DCTN1-223	ENST00000495643	KRTAP4-9	Q9BYQ8	210 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms