RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
UBR4-216ENST00000494503 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
UBR4-216ENST00000494503 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
UBR4-216ENST00000494503 SPRR2EP22531 72 aa4.15□□□□□ -1.75
UBR4-216ENST00000494503 SPRR2BP35325 72 aa4.15□□□□□ -1.75
UBR4-216ENST00000494503 SPRR2AP35326 72 aa4.15□□□□□ -1.75
UBR4-216ENST00000494503 A0A087WVE0 104 aa4.14□□□□□ -1.75
UBR4-216ENST00000494503 K7EP34 96 aa4.13□□□□□ -1.75
UBR4-216ENST00000494503 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
UBR4-216ENST00000494503 NDUFC1O43677 76 aa4.12□□□□□ -1.75
UBR4-216ENST00000494503 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
UBR4-216ENST00000494503 A8MUN3 132 aa4.1□□□□□ -1.75
UBR4-216ENST00000494503 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
UBR4-216ENST00000494503 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
UBR4-216ENST00000494503 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.75
UBR4-216ENST00000494503 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
UBR4-216ENST00000494503 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
UBR4-216ENST00000494503 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
UBR4-216ENST00000494503 ACYP1P07311 99 aa4.04□□□□□ -1.76
UBR4-216ENST00000494503 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
UBR4-216ENST00000494503 H0YAA0 97 aa4.03□□□□□ -1.76
UBR4-216ENST00000494503 MT1XP80297 61 aa4.03□□□□□ -1.76
UBR4-216ENST00000494503 H0Y9P7 68 aa4.02□□□□□ -1.77
UBR4-216ENST00000494503 SPRR2DP22532 72 aa4.02□□□□□ -1.77
UBR4-216ENST00000494503 R4GN34 69 aa4.02□□□□□ -1.77
UBR4-216ENST00000494503 COL5A1-AS1Q5SY13 56 aa4.01□□□□□ -1.77
UBR4-216ENST00000494503 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
UBR4-216ENST00000494503 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
UBR4-216ENST00000494503 ATOX1O00244 68 aa4□□□□□ -1.77
UBR4-216ENST00000494503 HIST1H4AP62805 103 aaKnown RBP4□□□□□ -1.77
UBR4-216ENST00000494503 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
UBR4-216ENST00000494503 ETDBQ3ZM63 59 aa3.99□□□□□ -1.77
UBR4-216ENST00000494503 M0QZ58 72 aa3.98□□□□□ -1.77
UBR4-216ENST00000494503 UQCRQO14949 82 aa3.98□□□□□ -1.77
UBR4-216ENST00000494503 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
UBR4-216ENST00000494503 GTF2H5Q6ZYL4 71 aa3.98□□□□□ -1.77
UBR4-216ENST00000494503 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
UBR4-216ENST00000494503 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
UBR4-216ENST00000494503 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
UBR4-216ENST00000494503 F8W1H4 67 aa3.94□□□□□ -1.78
UBR4-216ENST00000494503 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
UBR4-216ENST00000494503 LINC00208Q96KT6 92 aa3.94□□□□□ -1.78
UBR4-216ENST00000494503 P0C880 135 aa3.93□□□□□ -1.78
UBR4-216ENST00000494503 LOC105371267A0A1B0GV96 52 aa3.92□□□□□ -1.78
UBR4-216ENST00000494503 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
UBR4-216ENST00000494503 ATP5EP2Q5VTU8 51 aa3.91□□□□□ -1.78
UBR4-216ENST00000494503 MP68P56378 58 aa3.9□□□□□ -1.79
UBR4-216ENST00000494503 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
UBR4-216ENST00000494503 MT-ATP8P03928 68 aa3.86□□□□□ -1.79
UBR4-216ENST00000494503 FAM240AA0A1B0GVK7 77 aa3.83□□□□□ -1.8
UBR4-216ENST00000494503 PCP4L1A6NKN8 68 aa3.83□□□□□ -1.8
UBR4-216ENST00000494503 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
UBR4-216ENST00000494503 LINC00643Q86TS7 51 aa3.79□□□□□ -1.8
UBR4-216ENST00000494503 DMAC1Q96GE9 116 aa3.79□□□□□ -1.8
UBR4-216ENST00000494503 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
UBR4-216ENST00000494503 SCGB1A1P11684 91 aa3.75□□□□□ -1.81
UBR4-216ENST00000494503 H3BPC8 53 aa3.74□□□□□ -1.81
UBR4-216ENST00000494503 SPTSSBQ8NFR3 76 aa3.72□□□□□ -1.81
UBR4-216ENST00000494503 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
UBR4-216ENST00000494503 CHKB-CPT1BH3BT56 60 aa3.71□□□□□ -1.82
UBR4-216ENST00000494503 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
UBR4-216ENST00000494503 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
UBR4-216ENST00000494503 ACYP2P14621 99 aa3.7□□□□□ -1.82
UBR4-216ENST00000494503 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
UBR4-216ENST00000494503 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
UBR4-216ENST00000494503 SEC61GP60059 68 aa3.61□□□□□ -1.83
UBR4-216ENST00000494503 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
UBR4-216ENST00000494503 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
UBR4-216ENST00000494503 J3QR89 54 aa3.59□□□□□ -1.83
UBR4-216ENST00000494503 MT1EP04732 61 aa3.59□□□□□ -1.83
UBR4-216ENST00000494503 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
UBR4-216ENST00000494503 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
UBR4-216ENST00000494503 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
UBR4-216ENST00000494503 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
UBR4-216ENST00000494503 A0A0D9SG42 100 aa3.55□□□□□ -1.84
UBR4-216ENST00000494503 MT4P47944 62 aa3.55□□□□□ -1.84
UBR4-216ENST00000494503 A0A1B0GV90 55 aa3.54□□□□□ -1.84
UBR4-216ENST00000494503 SNURFQ9Y675 71 aa3.53□□□□□ -1.84
UBR4-216ENST00000494503 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
UBR4-216ENST00000494503 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
UBR4-216ENST00000494503 SMIM20Q8N5G0 67 aa3.51□□□□□ -1.85
UBR4-216ENST00000494503 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
UBR4-216ENST00000494503 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
UBR4-216ENST00000494503 MT1GP13640 62 aa3.48□□□□□ -1.85
UBR4-216ENST00000494503 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
UBR4-216ENST00000494503 SERP1Q9Y6X1 66 aa3.47□□□□□ -1.85
UBR4-216ENST00000494503 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
UBR4-216ENST00000494503 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
UBR4-216ENST00000494503 MT1MQ8N339 61 aa3.44□□□□□ -1.86
UBR4-216ENST00000494503 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
UBR4-216ENST00000494503 SPANXA2-OT1Q8N9U9 137 aa3.43□□□□□ -1.86
UBR4-216ENST00000494503 COA5Q86WW8 74 aa3.41□□□□□ -1.86
UBR4-216ENST00000494503 MT1LQ93083 61 aa3.4□□□□□ -1.87
UBR4-216ENST00000494503 A0A1B0GU33 70 aa3.39□□□□□ -1.87
UBR4-216ENST00000494503 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
UBR4-216ENST00000494503 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
UBR4-216ENST00000494503 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
UBR4-216ENST00000494503 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
UBR4-216ENST00000494503 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
UBR4-216ENST00000494503 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms