RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 ETDBQ3ZM63 59 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 RBM12B-AS1Q9P1G2 102 aa2.5□□□□□ -2.01
PTCD3-219ENST00000494323 ACYP1P07311 99 aa2.49□□□□□ -2.01
PTCD3-219ENST00000494323 BAALC-AS2P0C853 105 aa2.49□□□□□ -2.01
PTCD3-219ENST00000494323 LINC00846Q9NV44 126 aa2.49□□□□□ -2.01
PTCD3-219ENST00000494323 SS18L2Q9UHA2 77 aa2.49□□□□□ -2.01
PTCD3-219ENST00000494323 PDE6GP18545 87 aa2.48□□□□□ -2.01
PTCD3-219ENST00000494323 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
PTCD3-219ENST00000494323 SIGMAR1Q99720 223 aa2.48□□□□□ -2.01
PTCD3-219ENST00000494323 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
PTCD3-219ENST00000494323 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
PTCD3-219ENST00000494323 VPS25Q9BRG1 176 aa2.47□□□□□ -2.01
PTCD3-219ENST00000494323 A0A1W2PNM2 257 aa2.46□□□□□ -2.02
PTCD3-219ENST00000494323 A0A1B0GV72 72 aa2.45□□□□□ -2.02
PTCD3-219ENST00000494323 A0A1B0GW54 56 aa2.45□□□□□ -2.02
PTCD3-219ENST00000494323 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
PTCD3-219ENST00000494323 RBM3P98179 157 aaKnown RBP2.45□□□□□ -2.02
PTCD3-219ENST00000494323 DSCR8Q96T75 97 aa2.45□□□□□ -2.02
PTCD3-219ENST00000494323 LOC110117498A0A087WWA1 95 aa2.44□□□□□ -2.02
PTCD3-219ENST00000494323 SPINK7P58062 85 aa2.44□□□□□ -2.02
PTCD3-219ENST00000494323 CCKP06307 115 aa2.43□□□□□ -2.02
PTCD3-219ENST00000494323 SCGB1A1P11684 91 aa2.43□□□□□ -2.02
PTCD3-219ENST00000494323 ATP5EP2Q5VTU8 51 aa2.43□□□□□ -2.02
PTCD3-219ENST00000494323 ANAPC13Q9BS18 74 aa2.43□□□□□ -2.02
PTCD3-219ENST00000494323 LINC00472Q9H8W2 130 aa2.43□□□□□ -2.02
PTCD3-219ENST00000494323 C14orf132Q9NPU4 83 aa2.43□□□□□ -2.02
PTCD3-219ENST00000494323 TRBV7-4A0A0J9YYF1 115 aa2.42□□□□□ -2.02
PTCD3-219ENST00000494323 A8MWP4 228 aa2.42□□□□□ -2.02
PTCD3-219ENST00000494323 LINC00643Q86TS7 51 aa2.42□□□□□ -2.02
PTCD3-219ENST00000494323 UBL5Q9BZL1 73 aa2.42□□□□□ -2.02
PTCD3-219ENST00000494323 IMUPQ9GZP8 106 aa2.42□□□□□ -2.02
PTCD3-219ENST00000494323 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
PTCD3-219ENST00000494323 Q6ZQT0 140 aa2.41□□□□□ -2.02
PTCD3-219ENST00000494323 ZCCHC13Q8WW36 166 aaKnown RBP2.41□□□□□ -2.02
PTCD3-219ENST00000494323 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
PTCD3-219ENST00000494323 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
PTCD3-219ENST00000494323 WFDC13Q8IUB5 93 aa2.39□□□□□ -2.03
PTCD3-219ENST00000494323 C8orf87E5RJ46 101 aa2.38□□□□□ -2.03
PTCD3-219ENST00000494323 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
PTCD3-219ENST00000494323 NEBP20929 6669 aa2.37□□□□□ -2.03
PTCD3-219ENST00000494323 MT-ATP8P03928 68 aa2.37□□□□□ -2.03
PTCD3-219ENST00000494323 NREPQ16612 68 aa2.36□□□□□ -2.03
PTCD3-219ENST00000494323 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
PTCD3-219ENST00000494323 MP68P56378 58 aa2.35□□□□□ -2.03
PTCD3-219ENST00000494323 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
PTCD3-219ENST00000494323 SMIM20Q8N5G0 67 aa2.35□□□□□ -2.03
PTCD3-219ENST00000494323 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 A6NN06 94 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 J3KT08 172 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 ATOX1O00244 68 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 NDUFB1O75438 58 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 C4orf26Q17RF5 130 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
PTCD3-219ENST00000494323 FAM236AA0A1B0GUQ0 79 aa2.33□□□□□ -2.04
PTCD3-219ENST00000494323 FAM236BA0A1B0GV22 79 aa2.33□□□□□ -2.04
PTCD3-219ENST00000494323 K7ERS5 55 aa2.33□□□□□ -2.04
PTCD3-219ENST00000494323 HIST1H4AP62805 103 aaKnown RBP2.33□□□□□ -2.04
PTCD3-219ENST00000494323 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
PTCD3-219ENST00000494323 MT1BP07438 61 aa2.31□□□□□ -2.04
PTCD3-219ENST00000494323 UQCRQO14949 82 aa2.29□□□□□ -2.04
PTCD3-219ENST00000494323 Q5VV11 94 aa2.29□□□□□ -2.04
PTCD3-219ENST00000494323 ADM2Q7Z4H4 148 aa2.29□□□□□ -2.04
PTCD3-219ENST00000494323 PRR15Q8IV56 129 aa2.29□□□□□ -2.04
PTCD3-219ENST00000494323 SERP2Q8N6R1 65 aa2.29□□□□□ -2.04
PTCD3-219ENST00000494323 TRAV7A0A075B6U4 112 aa2.28□□□□□ -2.04
PTCD3-219ENST00000494323 A0A087WVE0 104 aa2.28□□□□□ -2.04
PTCD3-219ENST00000494323 HCG22E2RYF7 251 aa2.28□□□□□ -2.04
PTCD3-219ENST00000494323 COX7CP15954 63 aa2.28□□□□□ -2.04
PTCD3-219ENST00000494323 C1orf64Q8NEQ6 169 aa2.28□□□□□ -2.04
PTCD3-219ENST00000494323 MRPL34Q9BQ48 92 aaKnown RBP2.28□□□□□ -2.04
PTCD3-219ENST00000494323 MMP24-AS1A0A0U1RRL7 71 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 A6NED7 52 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 K7EQZ3 153 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 KRTAP19-8Q3LI54 63 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 TMEM254Q8TBM7 123 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
PTCD3-219ENST00000494323 hDV103S1A0JD37 113 aa2.26□□□□□ -2.05
PTCD3-219ENST00000494323 NDUFC1O43677 76 aa2.26□□□□□ -2.05
PTCD3-219ENST00000494323 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
PTCD3-219ENST00000494323 TP53AIP1Q9HCN2 124 aa2.26□□□□□ -2.05
PTCD3-219ENST00000494323 KMT2DO14686 5537 aa2.26□□□□□ -2.05
PTCD3-219ENST00000494323 H3BPC8 53 aa2.25□□□□□ -2.05
PTCD3-219ENST00000494323 CASC2Q6XLA1 102 aa2.25□□□□□ -2.05
PTCD3-219ENST00000494323 C7orf65Q6ZTY9 151 aa2.25□□□□□ -2.05
PTCD3-219ENST00000494323 R4GN34 69 aa2.25□□□□□ -2.05
PTCD3-219ENST00000494323 KLKP1Q107X0 134 aa2.24□□□□□ -2.05
PTCD3-219ENST00000494323 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
PTCD3-219ENST00000494323 ATP5EP56381 51 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-219ENST00000494323 TMEM258P61165 79 aa2.23□□□□□ -2.05
PTCD3-219ENST00000494323 S4R3F8 94 aa2.23□□□□□ -2.05
PTCD3-219ENST00000494323 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
PTCD3-219ENST00000494323 TRAV22A0A0B4J277 110 aa2.22□□□□□ -2.05
PTCD3-219ENST00000494323 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
PTCD3-219ENST00000494323 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
PTCD3-219ENST00000494323 LCA10Q71F78 164 aa2.22□□□□□ -2.05
PTCD3-219ENST00000494323 C20orf197Q8N268 126 aa2.22□□□□□ -2.05
PTCD3-219ENST00000494323 SPRR2EP22531 72 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms