RNA–Protein interactions for RNA: ENST00000494144.5

CCSER2-207, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 1,562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-207ENST00000494144 ITPR2Q14571 2701 aa2.08□□□□□ -2.08
CCSER2-207ENST00000494144 SETD2Q9BYW2 2564 aaPredicted RBP2.07□□□□□ -2.08
CCSER2-207ENST00000494144 ITPR3Q14573 2671 aa2.07□□□□□ -2.08
CCSER2-207ENST00000494144 F8P00451 2351 aa2.07□□□□□ -2.08
CCSER2-207ENST00000494144 APCP25054 2843 aa2.06□□□□□ -2.08
CCSER2-207ENST00000494144 TEX15Q9BXT5 2789 aa2.06□□□□□ -2.08
CCSER2-207ENST00000494144 CRYBG3Q68DQ2 2970 aa2.06□□□□□ -2.08
CCSER2-207ENST00000494144 GCN1Q92616 2671 aaKnown RBP2.06□□□□□ -2.08
CCSER2-207ENST00000494144 FLNAP21333 2647 aaKnown RBP2.06□□□□□ -2.08
CCSER2-207ENST00000494144 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
CCSER2-207ENST00000494144 SVEP1Q4LDE5 3571 aa2.05□□□□□ -2.08
CCSER2-207ENST00000494144 VWFP04275 2813 aa2.05□□□□□ -2.08
CCSER2-207ENST00000494144 ZANQ9Y493 2812 aa2.05□□□□□ -2.08
CCSER2-207ENST00000494144 TENM4Q6N022 2769 aa2.05□□□□□ -2.08
CCSER2-207ENST00000494144 NBPF19A0A087WUL8 3843 aa2.04□□□□□ -2.08
CCSER2-207ENST00000494144 FBN2P35556 2912 aa2.04□□□□□ -2.08
CCSER2-207ENST00000494144 CSMD1Q96PZ7 3565 aa2.03□□□□□ -2.08
CCSER2-207ENST00000494144 KRTAP21-3Q3LHN1 58 aa2.02□□□□□ -2.09
CCSER2-207ENST00000494144 SMR3AQ99954 134 aa2.02□□□□□ -2.09
CCSER2-207ENST00000494144 VPS13CQ709C8 3753 aa2.02□□□□□ -2.09
CCSER2-207ENST00000494144 PDZD2O15018 2839 aa2.02□□□□□ -2.09
CCSER2-207ENST00000494144 MXRA5Q9NR99 2828 aa2.02□□□□□ -2.09
CCSER2-207ENST00000494144 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
CCSER2-207ENST00000494144 CSMD2Q7Z408 3487 aa2.01□□□□□ -2.09
CCSER2-207ENST00000494144 DMBT1Q9UGM3 2413 aaPredicted RBP2□□□□□ -2.09
CCSER2-207ENST00000494144 COL6A5A8TX70 2615 aa2□□□□□ -2.09
CCSER2-207ENST00000494144 HIVEP1P15822 2718 aa2□□□□□ -2.09
CCSER2-207ENST00000494144 NF1P21359 2839 aa1.99□□□□□ -2.09
CCSER2-207ENST00000494144 ATRQ13535 2644 aa1.99□□□□□ -2.09
CCSER2-207ENST00000494144 TEP1Q99973 2627 aaKnown RBP1.99□□□□□ -2.09
CCSER2-207ENST00000494144 HTN3P15516 51 aa1.99□□□□□ -2.09
CCSER2-207ENST00000494144 SETXQ7Z333 2677 aaKnown RBP1.99□□□□□ -2.09
CCSER2-207ENST00000494144 ZNF469Q96JG9 3925 aaPredicted RBP1.99□□□□□ -2.09
CCSER2-207ENST00000494144 CELSR1Q9NYQ6 3014 aa1.98□□□□□ -2.09
CCSER2-207ENST00000494144 NSD1Q96L73 2696 aaPredicted RBP1.98□□□□□ -2.09
CCSER2-207ENST00000494144 NIPBLQ6KC79 2804 aaeCLIP1.96□□□□□ -2.1
CCSER2-207ENST00000494144 MAST4O15021 2626 aa1.96□□□□□ -2.1
CCSER2-207ENST00000494144 STAB1Q9NY15 2570 aa1.94□□□□□ -2.1
CCSER2-207ENST00000494144 AKAP9Q99996 3911 aa1.94□□□□□ -2.1
CCSER2-207ENST00000494144 KRTAP10-4P60372 401 aaPredicted RBP1.93□□□□□ -2.1
CCSER2-207ENST00000494144 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
CCSER2-207ENST00000494144 ANK3Q12955 4377 aaKnown RBP1.93□□□□□ -2.1
CCSER2-207ENST00000494144 TENM1Q9UKZ4 2725 aa1.92□□□□□ -2.1
CCSER2-207ENST00000494144 DEFB135Q30KP9 77 aa1.92□□□□□ -2.1
CCSER2-207ENST00000494144 MEGF8Q7Z7M0 2845 aa1.92□□□□□ -2.1
CCSER2-207ENST00000494144 MGAM2Q2M2H8 2515 aa1.91□□□□□ -2.1
CCSER2-207ENST00000494144 TNP1P09430 55 aa1.91□□□□□ -2.1
CCSER2-207ENST00000494144 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
CCSER2-207ENST00000494144 CUBNO60494 3623 aa1.9□□□□□ -2.1
CCSER2-207ENST00000494144 NBEAL2Q6ZNJ1 2754 aa1.9□□□□□ -2.11
CCSER2-207ENST00000494144 DEFB4AO15263 64 aa1.89□□□□□ -2.11
CCSER2-207ENST00000494144 TRRAPQ9Y4A5 3859 aa1.89□□□□□ -2.11
CCSER2-207ENST00000494144 NBEAL1Q6ZS30 2694 aa1.87□□□□□ -2.11
CCSER2-207ENST00000494144 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
CCSER2-207ENST00000494144 PKD1L1Q8TDX9 2849 aa1.86□□□□□ -2.11
CCSER2-207ENST00000494144 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
CCSER2-207ENST00000494144 TGP01266 2768 aa1.82□□□□□ -2.12
CCSER2-207ENST00000494144 TENM3Q9P273 2699 aa1.82□□□□□ -2.12
CCSER2-207ENST00000494144 STAB2Q8WWQ8 2551 aa1.82□□□□□ -2.12
CCSER2-207ENST00000494144 VPS13DQ5THJ4 4388 aa1.8□□□□□ -2.12
CCSER2-207ENST00000494144 CMYA5Q8N3K9 4069 aa1.79□□□□□ -2.12
CCSER2-207ENST00000494144 ANK2Q01484 3957 aa1.78□□□□□ -2.12
CCSER2-207ENST00000494144 CRCT1Q9UGL9 99 aa1.78□□□□□ -2.12
CCSER2-207ENST00000494144 COL7A1Q02388 2944 aa1.77□□□□□ -2.13
CCSER2-207ENST00000494144 DNAH3Q8TD57 4116 aa1.77□□□□□ -2.13
CCSER2-207ENST00000494144 DNHD1Q96M86 4753 aa1.74□□□□□ -2.13
CCSER2-207ENST00000494144 HUWE1Q7Z6Z7 4374 aaKnown RBP1.73□□□□□ -2.13
CCSER2-207ENST00000494144 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
CCSER2-207ENST00000494144 FBN3Q75N90 2809 aa1.72□□□□□ -2.13
CCSER2-207ENST00000494144 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
CCSER2-207ENST00000494144 DNAH11Q96DT5 4516 aa1.72□□□□□ -2.13
CCSER2-207ENST00000494144 PRKDCP78527 4128 aaKnown RBP1.71□□□□□ -2.14
CCSER2-207ENST00000494144 M0R2T5 61 aa1.69□□□□□ -2.14
CCSER2-207ENST00000494144 CSMD3Q7Z407 3707 aa1.68□□□□□ -2.14
CCSER2-207ENST00000494144 PLECQ15149 4684 aaKnown RBP1.68□□□□□ -2.14
CCSER2-207ENST00000494144 STARD9Q9P2P6 4700 aa1.67□□□□□ -2.14
CCSER2-207ENST00000494144 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
CCSER2-207ENST00000494144 DNAH7Q8WXX0 4024 aa1.67□□□□□ -2.14
CCSER2-207ENST00000494144 DYNC2H1Q8NCM8 4307 aaKnown RBP1.66□□□□□ -2.14
CCSER2-207ENST00000494144 LYSTQ99698 3801 aa1.66□□□□□ -2.14
CCSER2-207ENST00000494144 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
CCSER2-207ENST00000494144 KMT2AQ03164 3969 aa1.65□□□□□ -2.15
CCSER2-207ENST00000494144 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
CCSER2-207ENST00000494144 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
CCSER2-207ENST00000494144 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
CCSER2-207ENST00000494144 DNAH1Q9P2D7 4330 aa1.63□□□□□ -2.15
CCSER2-207ENST00000494144 MYCBP2O75592 4640 aa1.62□□□□□ -2.15
CCSER2-207ENST00000494144 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
CCSER2-207ENST00000494144 DNAH10Q8IVF4 4471 aa1.62□□□□□ -2.15
CCSER2-207ENST00000494144 DNAH8Q96JB1 4490 aa1.61□□□□□ -2.15
CCSER2-207ENST00000494144 HECTD4Q9Y4D8 3996 aa1.6□□□□□ -2.15
CCSER2-207ENST00000494144 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.15
CCSER2-207ENST00000494144 DNAH6Q9C0G6 4158 aa1.59□□□□□ -2.16
CCSER2-207ENST00000494144 SMR3BP02814 79 aaPredicted RBP1.59□□□□□ -2.16
CCSER2-207ENST00000494144 DNAH2Q9P225 4427 aa1.59□□□□□ -2.16
CCSER2-207ENST00000494144 DNAH17Q9UFH2 4485 aa1.58□□□□□ -2.16
CCSER2-207ENST00000494144 HYDINQ4G0P3 5121 aa1.57□□□□□ -2.16
CCSER2-207ENST00000494144 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
CCSER2-207ENST00000494144 RYR2Q92736 4967 aa1.56□□□□□ -2.16
CCSER2-207ENST00000494144 KMT2CQ8NEZ4 4911 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms