RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
CPSF7-213ENST00000494016 hDV103S1A0JD37 113 aa3.45□□□□□ -1.86
CPSF7-213ENST00000494016 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
CPSF7-213ENST00000494016 PKHD1L1Q86WI1 4243 aa3.43□□□□□ -1.86
CPSF7-213ENST00000494016 H0Y9P7 68 aa3.42□□□□□ -1.86
CPSF7-213ENST00000494016 H3BPC8 53 aa3.42□□□□□ -1.86
CPSF7-213ENST00000494016 SMR3BP02814 79 aaPredicted RBP3.42□□□□□ -1.86
CPSF7-213ENST00000494016 ATP5EP56381 51 aaPredicted RBP3.42□□□□□ -1.86
CPSF7-213ENST00000494016 KRTAP10-4P60372 401 aaPredicted RBP3.42□□□□□ -1.86
CPSF7-213ENST00000494016 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
CPSF7-213ENST00000494016 LINC00208Q96KT6 92 aa3.42□□□□□ -1.86
CPSF7-213ENST00000494016 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
CPSF7-213ENST00000494016 TRAV22A0A0B4J277 110 aa3.41□□□□□ -1.86
CPSF7-213ENST00000494016 K7ERS5 55 aa3.41□□□□□ -1.86
CPSF7-213ENST00000494016 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
CPSF7-213ENST00000494016 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
CPSF7-213ENST00000494016 MRPL34Q9BQ48 92 aaKnown RBP3.41□□□□□ -1.86
CPSF7-213ENST00000494016 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
CPSF7-213ENST00000494016 FLG2Q5D862 2391 aaPredicted RBP3.39□□□□□ -1.87
CPSF7-213ENST00000494016 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
CPSF7-213ENST00000494016 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
CPSF7-213ENST00000494016 Q5VSD8 79 aa3.39□□□□□ -1.87
CPSF7-213ENST00000494016 Q5W150 140 aa3.39□□□□□ -1.87
CPSF7-213ENST00000494016 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
CPSF7-213ENST00000494016 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
CPSF7-213ENST00000494016 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
CPSF7-213ENST00000494016 CYP4F30PQ9H0H9 118 aa3.38□□□□□ -1.87
CPSF7-213ENST00000494016 RNF213Q63HN8 5207 aa3.38□□□□□ -1.87
CPSF7-213ENST00000494016 FP248Q71RG6 208 aaPredicted RBP3.37□□□□□ -1.87
CPSF7-213ENST00000494016 SPINK1P00995 79 aa3.36□□□□□ -1.87
CPSF7-213ENST00000494016 SPANXA2-OT1Q8N9U9 137 aa3.36□□□□□ -1.87
CPSF7-213ENST00000494016 LIMD2Q9BT23 127 aa3.36□□□□□ -1.87
CPSF7-213ENST00000494016 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CPSF7-213ENST00000494016 A6NED7 52 aa3.34□□□□□ -1.87
CPSF7-213ENST00000494016 RPS29P62273 56 aaKnown RBP3.34□□□□□ -1.87
CPSF7-213ENST00000494016 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
CPSF7-213ENST00000494016 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
CPSF7-213ENST00000494016 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
CPSF7-213ENST00000494016 C7orf65Q6ZTY9 151 aa3.32□□□□□ -1.88
CPSF7-213ENST00000494016 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
CPSF7-213ENST00000494016 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
CPSF7-213ENST00000494016 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
CPSF7-213ENST00000494016 RETNLBQ9BQ08 111 aa3.3□□□□□ -1.88
CPSF7-213ENST00000494016 TNXBP22105 4242 aa3.29□□□□□ -1.88
CPSF7-213ENST00000494016 Q1T7F1 81 aa3.29□□□□□ -1.88
CPSF7-213ENST00000494016 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
CPSF7-213ENST00000494016 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
CPSF7-213ENST00000494016 HRES1P13985 223 aa3.27□□□□□ -1.89
CPSF7-213ENST00000494016 COA5Q86WW8 74 aa3.27□□□□□ -1.89
CPSF7-213ENST00000494016 LRP2P98164 4655 aa3.26□□□□□ -1.89
CPSF7-213ENST00000494016 A8MUU9 505 aa3.25□□□□□ -1.89
CPSF7-213ENST00000494016 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
CPSF7-213ENST00000494016 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
CPSF7-213ENST00000494016 ATP11AUNQ6ZP68 121 aa3.24□□□□□ -1.89
CPSF7-213ENST00000494016 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
CPSF7-213ENST00000494016 MT1HL1P0DM35 61 aa3.23□□□□□ -1.89
CPSF7-213ENST00000494016 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
CPSF7-213ENST00000494016 ACYP2P14621 99 aa3.22□□□□□ -1.89
CPSF7-213ENST00000494016 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
CPSF7-213ENST00000494016 Q5VV11 94 aa3.19□□□□□ -1.9
CPSF7-213ENST00000494016 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
CPSF7-213ENST00000494016 A6NN06 94 aa3.17□□□□□ -1.9
CPSF7-213ENST00000494016 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
CPSF7-213ENST00000494016 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
CPSF7-213ENST00000494016 LPAP08519 4548 aa3.15□□□□□ -1.91
CPSF7-213ENST00000494016 SPINK7P58062 85 aa3.15□□□□□ -1.91
CPSF7-213ENST00000494016 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
CPSF7-213ENST00000494016 CHKB-CPT1BH3BT56 60 aa3.14□□□□□ -1.91
CPSF7-213ENST00000494016 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
CPSF7-213ENST00000494016 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
CPSF7-213ENST00000494016 A8MU10 97 aa3.12□□□□□ -1.91
CPSF7-213ENST00000494016 MUC2Q02817 5179 aa3.11□□□□□ -1.91
CPSF7-213ENST00000494016 ROMO1P60602 79 aa3.11□□□□□ -1.91
CPSF7-213ENST00000494016 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
CPSF7-213ENST00000494016 COX6B2Q6YFQ2 88 aa3.1□□□□□ -1.91
CPSF7-213ENST00000494016 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
CPSF7-213ENST00000494016 A0A1B0GU33 70 aa3.06□□□□□ -1.92
CPSF7-213ENST00000494016 A0A1B0GU69 56 aa3.06□□□□□ -1.92
CPSF7-213ENST00000494016 CDC42SE1Q9NRR8 79 aa3.06□□□□□ -1.92
CPSF7-213ENST00000494016 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
CPSF7-213ENST00000494016 SPATA8Q6RVD6 105 aa3.04□□□□□ -1.92
CPSF7-213ENST00000494016 SPTSSBQ8NFR3 76 aa3.04□□□□□ -1.92
CPSF7-213ENST00000494016 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
CPSF7-213ENST00000494016 MUC17Q685J3 4493 aa3.02□□□□□ -1.93
CPSF7-213ENST00000494016 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
CPSF7-213ENST00000494016 KRTAP25-1Q3LHN0 102 aa3.02□□□□□ -1.93
CPSF7-213ENST00000494016 UQCR11O14957 56 aa2.99□□□□□ -1.93
CPSF7-213ENST00000494016 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
CPSF7-213ENST00000494016 H1FX-AS1Q4G0G2 97 aa2.98□□□□□ -1.93
CPSF7-213ENST00000494016 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
CPSF7-213ENST00000494016 S4R3F8 94 aa2.97□□□□□ -1.93
CPSF7-213ENST00000494016 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.94
CPSF7-213ENST00000494016 H0YAA0 97 aa2.94□□□□□ -1.94
CPSF7-213ENST00000494016 R4GN34 69 aa2.94□□□□□ -1.94
CPSF7-213ENST00000494016 P0C880 135 aa2.93□□□□□ -1.94
CPSF7-213ENST00000494016 KRTAP19-2Q3LHN2 52 aa2.91□□□□□ -1.94
CPSF7-213ENST00000494016 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
CPSF7-213ENST00000494016 CSAG1Q6PB30 78 aa2.89□□□□□ -1.95
CPSF7-213ENST00000494016 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
CPSF7-213ENST00000494016 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms