RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
SMG7-208ENST00000493609 LIMD2Q9BT23 127 aa2.07□□□□□ -2.08
SMG7-208ENST00000493609 UBL5Q9BZL1 73 aa2.07□□□□□ -2.08
SMG7-208ENST00000493609 SPINK1P00995 79 aa2.06□□□□□ -2.08
SMG7-208ENST00000493609 LINC00846Q9NV44 126 aa2.06□□□□□ -2.08
SMG7-208ENST00000493609 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
SMG7-208ENST00000493609 SCGB1A1P11684 91 aa2.05□□□□□ -2.08
SMG7-208ENST00000493609 LINC00472Q9H8W2 130 aa2.05□□□□□ -2.08
SMG7-208ENST00000493609 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
SMG7-208ENST00000493609 FLG2Q5D862 2391 aaPredicted RBP2.04□□□□□ -2.08
SMG7-208ENST00000493609 C9orf153Q5TBE3 101 aa2.04□□□□□ -2.08
SMG7-208ENST00000493609 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
SMG7-208ENST00000493609 Q96NJ1 140 aa2.04□□□□□ -2.08
SMG7-208ENST00000493609 SIGMAR1Q99720 223 aa2.04□□□□□ -2.08
SMG7-208ENST00000493609 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
SMG7-208ENST00000493609 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
SMG7-208ENST00000493609 A0A087WSZ3 146 aa2.03□□□□□ -2.08
SMG7-208ENST00000493609 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
SMG7-208ENST00000493609 HAMPP81172 84 aa2.03□□□□□ -2.08
SMG7-208ENST00000493609 SMR3BP02814 79 aaPredicted RBP2.02□□□□□ -2.09
SMG7-208ENST00000493609 MT1HL1P0DM35 61 aa2.02□□□□□ -2.09
SMG7-208ENST00000493609 NREPQ16612 68 aa2.02□□□□□ -2.09
SMG7-208ENST00000493609 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
SMG7-208ENST00000493609 PRR15Q8IV56 129 aa2.01□□□□□ -2.09
SMG7-208ENST00000493609 SMIM20Q8N5G0 67 aa2.01□□□□□ -2.09
SMG7-208ENST00000493609 VPS25Q9BRG1 176 aa2.01□□□□□ -2.09
SMG7-208ENST00000493609 H3BPC8 53 aa2□□□□□ -2.09
SMG7-208ENST00000493609 MT-ATP8P03928 68 aa2□□□□□ -2.09
SMG7-208ENST00000493609 C4orf26Q17RF5 130 aa2□□□□□ -2.09
SMG7-208ENST00000493609 C1orf195Q5TG92 126 aa2□□□□□ -2.09
SMG7-208ENST00000493609 PCLOQ9Y6V0 5065 aa2□□□□□ -2.09
SMG7-208ENST00000493609 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
SMG7-208ENST00000493609 A0A1B0GV72 72 aa1.99□□□□□ -2.09
SMG7-208ENST00000493609 ATOX1O00244 68 aa1.99□□□□□ -2.09
SMG7-208ENST00000493609 NDUFB1O75438 58 aa1.99□□□□□ -2.09
SMG7-208ENST00000493609 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
SMG7-208ENST00000493609 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
SMG7-208ENST00000493609 HCG22E2RYF7 251 aa1.98□□□□□ -2.09
SMG7-208ENST00000493609 K7EQZ3 153 aa1.98□□□□□ -2.09
SMG7-208ENST00000493609 TPRXLQ17RH7 258 aa1.98□□□□□ -2.09
SMG7-208ENST00000493609 TMEM254Q8TBM7 123 aa1.98□□□□□ -2.09
SMG7-208ENST00000493609 TP53AIP1Q9HCN2 124 aa1.97□□□□□ -2.09
SMG7-208ENST00000493609 FAM236AA0A1B0GUQ0 79 aa1.96□□□□□ -2.1
SMG7-208ENST00000493609 FAM236BA0A1B0GV22 79 aa1.96□□□□□ -2.1
SMG7-208ENST00000493609 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
SMG7-208ENST00000493609 DMBT1Q9UGM3 2413 aaPredicted RBP1.96□□□□□ -2.1
SMG7-208ENST00000493609 TRAV7A0A075B6U4 112 aa1.95□□□□□ -2.1
SMG7-208ENST00000493609 A0A087WVE0 104 aa1.95□□□□□ -2.1
SMG7-208ENST00000493609 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
SMG7-208ENST00000493609 MRPL34Q9BQ48 92 aaKnown RBP1.95□□□□□ -2.1
SMG7-208ENST00000493609 HMCN2Q8NDA2 5059 aa1.95□□□□□ -2.1
SMG7-208ENST00000493609 UQCRQO14949 82 aa1.94□□□□□ -2.1
SMG7-208ENST00000493609 KLKP1Q107X0 134 aa1.94□□□□□ -2.1
SMG7-208ENST00000493609 SERP2Q8N6R1 65 aa1.94□□□□□ -2.1
SMG7-208ENST00000493609 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
SMG7-208ENST00000493609 MUC17Q685J3 4493 aa1.94□□□□□ -2.1
SMG7-208ENST00000493609 TRAV22A0A0B4J277 110 aa1.93□□□□□ -2.1
SMG7-208ENST00000493609 COX7CP15954 63 aa1.93□□□□□ -2.1
SMG7-208ENST00000493609 HRCT1Q6UXD1 115 aa1.93□□□□□ -2.1
SMG7-208ENST00000493609 HERC1Q15751 4861 aa1.92□□□□□ -2.1
SMG7-208ENST00000493609 NDUFC1O43677 76 aa1.92□□□□□ -2.1
SMG7-208ENST00000493609 LOC101927531A0A1B0GV80 90 aa1.91□□□□□ -2.1
SMG7-208ENST00000493609 RPL37P61927 97 aaKnown RBP1.91□□□□□ -2.1
SMG7-208ENST00000493609 LRP2P98164 4655 aa1.9□□□□□ -2.1
SMG7-208ENST00000493609 WFDC13Q8IUB5 93 aa1.9□□□□□ -2.11
SMG7-208ENST00000493609 ATP5EP56381 51 aaPredicted RBP1.89□□□□□ -2.11
SMG7-208ENST00000493609 H0Y9P7 68 aa1.88□□□□□ -2.11
SMG7-208ENST00000493609 C7orf65Q6ZTY9 151 aa1.88□□□□□ -2.11
SMG7-208ENST00000493609 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
SMG7-208ENST00000493609 H7BZZ5 65 aa1.87□□□□□ -2.11
SMG7-208ENST00000493609 TMEM258P61165 79 aa1.87□□□□□ -2.11
SMG7-208ENST00000493609 LPAP08519 4548 aa1.87□□□□□ -2.11
SMG7-208ENST00000493609 A8MUN3 132 aa1.86□□□□□ -2.11
SMG7-208ENST00000493609 C20orf197Q8N268 126 aa1.86□□□□□ -2.11
SMG7-208ENST00000493609 CYP4F30PQ9H0H9 118 aa1.86□□□□□ -2.11
SMG7-208ENST00000493609 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
SMG7-208ENST00000493609 ATP11AUNQ6ZP68 121 aa1.85□□□□□ -2.11
SMG7-208ENST00000493609 CCDC179H3BU77 68 aa1.84□□□□□ -2.11
SMG7-208ENST00000493609 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
SMG7-208ENST00000493609 LINC00208Q96KT6 92 aa1.84□□□□□ -2.11
SMG7-208ENST00000493609 FAM236DA0A1B0GTK5 79 aa1.82□□□□□ -2.12
SMG7-208ENST00000493609 FAM236CP0DP71 79 aa1.82□□□□□ -2.12
SMG7-208ENST00000493609 SPINK7P58062 85 aa1.82□□□□□ -2.12
SMG7-208ENST00000493609 COA5Q86WW8 74 aa1.82□□□□□ -2.12
SMG7-208ENST00000493609 CYSTM1Q9H1C7 97 aa1.82□□□□□ -2.12
SMG7-208ENST00000493609 FLGP20930 4061 aaPredicted RBP1.82□□□□□ -2.12
SMG7-208ENST00000493609 RPS28P62857 69 aaKnown RBP1.81□□□□□ -2.12
SMG7-208ENST00000493609 COX6B2Q6YFQ2 88 aa1.81□□□□□ -2.12
SMG7-208ENST00000493609 SNURFQ9Y675 71 aa1.81□□□□□ -2.12
SMG7-208ENST00000493609 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
SMG7-208ENST00000493609 KRTAP19-2Q3LHN2 52 aa1.8□□□□□ -2.12
SMG7-208ENST00000493609 SERP1Q9Y6X1 66 aa1.8□□□□□ -2.12
SMG7-208ENST00000493609 ACYP2P14621 99 aa1.79□□□□□ -2.12
SMG7-208ENST00000493609 UBR4Q5T4S7 5183 aa1.78□□□□□ -2.12
SMG7-208ENST00000493609 H1FX-AS1Q4G0G2 97 aa1.76□□□□□ -2.13
SMG7-208ENST00000493609 SPTSSBQ8NFR3 76 aa1.76□□□□□ -2.13
SMG7-208ENST00000493609 FAT4Q6V0I7 4981 aa1.75□□□□□ -2.13
SMG7-208ENST00000493609 H0YAA0 97 aa1.75□□□□□ -2.13
SMG7-208ENST00000493609 KTN1-AS1Q86SY8 53 aa1.75□□□□□ -2.13
SMG7-208ENST00000493609 RNF213Q63HN8 5207 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms