RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
SMTN-219ENST00000493335 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
SMTN-219ENST00000493335 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
SMTN-219ENST00000493335 KRTAP15-1Q3LI76 137 aa7.67□□□□□ -1.18
SMTN-219ENST00000493335 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
SMTN-219ENST00000493335 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
SMTN-219ENST00000493335 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
SMTN-219ENST00000493335 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
SMTN-219ENST00000493335 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
SMTN-219ENST00000493335 S4R3F8 94 aa7.58□□□□□ -1.2
SMTN-219ENST00000493335 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
SMTN-219ENST00000493335 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
SMTN-219ENST00000493335 HSPG2P98160 4391 aa7.56□□□□□ -1.2
SMTN-219ENST00000493335 APOBP04114 4563 aaKnown RBP7.56□□□□□ -1.2
SMTN-219ENST00000493335 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
SMTN-219ENST00000493335 KRTAP21-3Q3LHN1 58 aa7.55□□□□□ -1.2
SMTN-219ENST00000493335 RYR2Q92736 4967 aa7.54□□□□□ -1.2
SMTN-219ENST00000493335 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
SMTN-219ENST00000493335 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.21
SMTN-219ENST00000493335 RYR3Q15413 4870 aa7.46□□□□□ -1.21
SMTN-219ENST00000493335 KRTAP12-2P59991 146 aa7.46□□□□□ -1.21
SMTN-219ENST00000493335 XP32Q5T750 250 aa7.45□□□□□ -1.22
SMTN-219ENST00000493335 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
SMTN-219ENST00000493335 LPAP08519 4548 aa7.38□□□□□ -1.23
SMTN-219ENST00000493335 Q5VSD8 79 aa7.36□□□□□ -1.23
SMTN-219ENST00000493335 TNXBP22105 4242 aa7.32□□□□□ -1.24
SMTN-219ENST00000493335 KRTAP12-1P59990 96 aa7.32□□□□□ -1.24
SMTN-219ENST00000493335 KIAA1109Q2LD37 5005 aa7.3□□□□□ -1.24
SMTN-219ENST00000493335 LUZP6Q538Z0 58 aa7.3□□□□□ -1.24
SMTN-219ENST00000493335 LRP2P98164 4655 aa7.27□□□□□ -1.25
SMTN-219ENST00000493335 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
SMTN-219ENST00000493335 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
SMTN-219ENST00000493335 M0QZ58 72 aa7.21□□□□□ -1.26
SMTN-219ENST00000493335 R4GN34 69 aa7.16□□□□□ -1.26
SMTN-219ENST00000493335 RYR1P21817 5038 aa7.15□□□□□ -1.26
SMTN-219ENST00000493335 J3QL48 77 aa7.06□□□□□ -1.28
SMTN-219ENST00000493335 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
SMTN-219ENST00000493335 ABCA13Q86UQ4 5058 aa7.03□□□□□ -1.28
SMTN-219ENST00000493335 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
SMTN-219ENST00000493335 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
SMTN-219ENST00000493335 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
SMTN-219ENST00000493335 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
SMTN-219ENST00000493335 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
SMTN-219ENST00000493335 MUC2Q02817 5179 aa6.79□□□□□ -1.32
SMTN-219ENST00000493335 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
SMTN-219ENST00000493335 HERC2O95714 4834 aa6.72□□□□□ -1.33
SMTN-219ENST00000493335 MUC17Q685J3 4493 aa6.67□□□□□ -1.34
SMTN-219ENST00000493335 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
SMTN-219ENST00000493335 HERC1Q15751 4861 aa6.59□□□□□ -1.35
SMTN-219ENST00000493335 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
SMTN-219ENST00000493335 TNP1P09430 55 aa6.52□□□□□ -1.37
SMTN-219ENST00000493335 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.37
SMTN-219ENST00000493335 KRTAP19-2Q3LHN2 52 aa6.43□□□□□ -1.38
SMTN-219ENST00000493335 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
SMTN-219ENST00000493335 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
SMTN-219ENST00000493335 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
SMTN-219ENST00000493335 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
SMTN-219ENST00000493335 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
SMTN-219ENST00000493335 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
SMTN-219ENST00000493335 M0R2T5 61 aa6.29□□□□□ -1.4
SMTN-219ENST00000493335 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
SMTN-219ENST00000493335 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
SMTN-219ENST00000493335 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SMTN-219ENST00000493335 INE1O15225 51 aa6.11□□□□□ -1.43
SMTN-219ENST00000493335 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.44
SMTN-219ENST00000493335 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
SMTN-219ENST00000493335 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
SMTN-219ENST00000493335 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
SMTN-219ENST00000493335 MT1FP04733 61 aa5.94□□□□□ -1.46
SMTN-219ENST00000493335 MT1HP80294 61 aa5.91□□□□□ -1.46
SMTN-219ENST00000493335 MT2AP02795 61 aa5.89□□□□□ -1.47
SMTN-219ENST00000493335 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
SMTN-219ENST00000493335 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
SMTN-219ENST00000493335 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
SMTN-219ENST00000493335 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
SMTN-219ENST00000493335 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
SMTN-219ENST00000493335 MT1XP80297 61 aa5.75□□□□□ -1.49
SMTN-219ENST00000493335 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
SMTN-219ENST00000493335 MT1BP07438 61 aa5.72□□□□□ -1.49
SMTN-219ENST00000493335 KMT2DO14686 5537 aa5.68□□□□□ -1.5
SMTN-219ENST00000493335 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
SMTN-219ENST00000493335 USH2AO75445 5202 aa5.66□□□□□ -1.5
SMTN-219ENST00000493335 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
SMTN-219ENST00000493335 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
SMTN-219ENST00000493335 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
SMTN-219ENST00000493335 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
SMTN-219ENST00000493335 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
SMTN-219ENST00000493335 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
SMTN-219ENST00000493335 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
SMTN-219ENST00000493335 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
SMTN-219ENST00000493335 LCE2BO14633 110 aa5.32□□□□□ -1.56
SMTN-219ENST00000493335 KRTAP9-6A8MVA2 160 aa5.31□□□□□ -1.56
SMTN-219ENST00000493335 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
SMTN-219ENST00000493335 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SMTN-219ENST00000493335 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
SMTN-219ENST00000493335 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
SMTN-219ENST00000493335 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
SMTN-219ENST00000493335 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
SMTN-219ENST00000493335 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
SMTN-219ENST00000493335 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms