RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
LYSMD4-208ENST00000493256 IMUPQ9GZP8 106 aa9.62□□□□□ -0.87
LYSMD4-208ENST00000493256 KRTAP5-9P26371 169 aa9.6□□□□□ -0.87
LYSMD4-208ENST00000493256 KMT2DO14686 5537 aa9.6□□□□□ -0.87
LYSMD4-208ENST00000493256 MDN1Q9NU22 5596 aa9.58□□□□□ -0.88
LYSMD4-208ENST00000493256 UQCRQO14949 82 aa9.56□□□□□ -0.88
LYSMD4-208ENST00000493256 NDUFC1O43677 76 aa9.56□□□□□ -0.88
LYSMD4-208ENST00000493256 H0Y9P7 68 aa9.55□□□□□ -0.88
LYSMD4-208ENST00000493256 H0YAA0 97 aa9.55□□□□□ -0.88
LYSMD4-208ENST00000493256 ACYP1P07311 99 aa9.55□□□□□ -0.88
LYSMD4-208ENST00000493256 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
LYSMD4-208ENST00000493256 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
LYSMD4-208ENST00000493256 HIST1H4AP62805 103 aaKnown RBP9.53□□□□□ -0.88
LYSMD4-208ENST00000493256 ATOX1O00244 68 aa9.52□□□□□ -0.89
LYSMD4-208ENST00000493256 FAM240AA0A1B0GVK7 77 aa9.5□□□□□ -0.89
LYSMD4-208ENST00000493256 KRTAP20-1Q3LI63 56 aa9.5□□□□□ -0.89
LYSMD4-208ENST00000493256 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
LYSMD4-208ENST00000493256 A8MUN3 132 aa9.44□□□□□ -0.9
LYSMD4-208ENST00000493256 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
LYSMD4-208ENST00000493256 MT1XP80297 61 aa9.33□□□□□ -0.92
LYSMD4-208ENST00000493256 LINC00643Q86TS7 51 aa9.32□□□□□ -0.92
LYSMD4-208ENST00000493256 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
LYSMD4-208ENST00000493256 OCR1Q9BZK8 76 aa9.27□□□□□ -0.93
LYSMD4-208ENST00000493256 MP68P56378 58 aa9.26□□□□□ -0.93
LYSMD4-208ENST00000493256 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
LYSMD4-208ENST00000493256 SPRR2FQ96RM1 72 aa9.26□□□□□ -0.93
LYSMD4-208ENST00000493256 P0C880 135 aa9.22□□□□□ -0.93
LYSMD4-208ENST00000493256 R4GN34 69 aa9.22□□□□□ -0.93
LYSMD4-208ENST00000493256 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
LYSMD4-208ENST00000493256 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
LYSMD4-208ENST00000493256 SPRR2EP22531 72 aa9.18□□□□□ -0.94
LYSMD4-208ENST00000493256 SPRR2BP35325 72 aa9.18□□□□□ -0.94
LYSMD4-208ENST00000493256 SPRR2AP35326 72 aa9.18□□□□□ -0.94
LYSMD4-208ENST00000493256 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
LYSMD4-208ENST00000493256 KRTAP8-1Q8IUC2 63 aa9.15□□□□□ -0.94
LYSMD4-208ENST00000493256 M0QZ58 72 aa9.14□□□□□ -0.95
LYSMD4-208ENST00000493256 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
LYSMD4-208ENST00000493256 DMAC1Q96GE9 116 aa9.12□□□□□ -0.95
LYSMD4-208ENST00000493256 H3BPC8 53 aa9.1□□□□□ -0.95
LYSMD4-208ENST00000493256 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
LYSMD4-208ENST00000493256 LCE1AQ5T7P2 110 aa9.04□□□□□ -0.96
LYSMD4-208ENST00000493256 LINC01554Q52M75 96 aa9.03□□□□□ -0.96
LYSMD4-208ENST00000493256 KRTAP4-8A0A0G2JLE6 195 aa9□□□□□ -0.97
LYSMD4-208ENST00000493256 KRTAP4-8Q9BYQ9 185 aa9□□□□□ -0.97
LYSMD4-208ENST00000493256 A0A1B0GV90 55 aa8.99□□□□□ -0.97
LYSMD4-208ENST00000493256 SCGB1A1P11684 91 aa8.96□□□□□ -0.98
LYSMD4-208ENST00000493256 TRAV7A0A075B6U4 112 aa8.9□□□□□ -0.98
LYSMD4-208ENST00000493256 KRTAP10-7P60409 375 aaPredicted RBP8.9□□□□□ -0.98
LYSMD4-208ENST00000493256 J3QR89 54 aa8.88□□□□□ -0.99
LYSMD4-208ENST00000493256 KRTAP2-2Q9BYT5 123 aa8.88□□□□□ -0.99
LYSMD4-208ENST00000493256 KRTAP2-1Q9BYU5 128 aa8.88□□□□□ -0.99
LYSMD4-208ENST00000493256 SPRR2DP22532 72 aa8.87□□□□□ -0.99
LYSMD4-208ENST00000493256 KRTAP10-12P60413 245 aa8.84□□□□□ -0.99
LYSMD4-208ENST00000493256 ACYP2P14621 99 aa8.83□□□□□ -1
LYSMD4-208ENST00000493256 MT-ATP8P03928 68 aa8.79□□□□□ -1
LYSMD4-208ENST00000493256 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
LYSMD4-208ENST00000493256 CHKB-CPT1BH3BT56 60 aa8.67□□□□□ -1.02
LYSMD4-208ENST00000493256 LCE3BQ5TA77 95 aa8.65□□□□□ -1.02
LYSMD4-208ENST00000493256 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
LYSMD4-208ENST00000493256 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
LYSMD4-208ENST00000493256 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
LYSMD4-208ENST00000493256 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.06
LYSMD4-208ENST00000493256 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
LYSMD4-208ENST00000493256 K7ERU9 68 aa8.43□□□□□ -1.06
LYSMD4-208ENST00000493256 KRTAP19-7Q3SYF9 63 aa8.35□□□□□ -1.07
LYSMD4-208ENST00000493256 DSTQ03001 7570 aaKnown RBP8.35□□□□□ -1.07
LYSMD4-208ENST00000493256 LCE5AQ5TCM9 118 aa8.31□□□□□ -1.08
LYSMD4-208ENST00000493256 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
LYSMD4-208ENST00000493256 MT1EP04732 61 aa8.28□□□□□ -1.08
LYSMD4-208ENST00000493256 KRTAP19-3Q7Z4W3 81 aa8.25□□□□□ -1.09
LYSMD4-208ENST00000493256 COA5Q86WW8 74 aa8.25□□□□□ -1.09
LYSMD4-208ENST00000493256 A0A0D9SG42 100 aa8.23□□□□□ -1.09
LYSMD4-208ENST00000493256 GPR98Q8WXG9 6306 aa8.19□□□□□ -1.1
LYSMD4-208ENST00000493256 SEC61GP60059 68 aa8.16□□□□□ -1.1
LYSMD4-208ENST00000493256 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
LYSMD4-208ENST00000493256 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
LYSMD4-208ENST00000493256 KRTAP4-9Q9BYQ8 210 aa8.12□□□□□ -1.11
LYSMD4-208ENST00000493256 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
LYSMD4-208ENST00000493256 A0A1B0GU33 70 aa8.07□□□□□ -1.12
LYSMD4-208ENST00000493256 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
LYSMD4-208ENST00000493256 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
LYSMD4-208ENST00000493256 CYSTM1Q9H1C7 97 aa8.05□□□□□ -1.12
LYSMD4-208ENST00000493256 MT1GP13640 62 aa8.01□□□□□ -1.13
LYSMD4-208ENST00000493256 COX7CP15954 63 aa7.96□□□□□ -1.14
LYSMD4-208ENST00000493256 PP632Q6XCG6 107 aa7.94□□□□□ -1.14
LYSMD4-208ENST00000493256 H7BZZ5 65 aa7.92□□□□□ -1.14
LYSMD4-208ENST00000493256 LCE1DQ5T752 114 aa7.91□□□□□ -1.14
LYSMD4-208ENST00000493256 MT1MQ8N339 61 aa7.9□□□□□ -1.14
LYSMD4-208ENST00000493256 MT1LQ93083 61 aa7.88□□□□□ -1.15
LYSMD4-208ENST00000493256 HMCN1Q96RW7 5635 aa7.85□□□□□ -1.15
LYSMD4-208ENST00000493256 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
LYSMD4-208ENST00000493256 A0A1B0GU69 56 aa7.82□□□□□ -1.16
LYSMD4-208ENST00000493256 A8MU10 97 aa7.82□□□□□ -1.16
LYSMD4-208ENST00000493256 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
LYSMD4-208ENST00000493256 MT4P47944 62 aa7.79□□□□□ -1.16
LYSMD4-208ENST00000493256 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
LYSMD4-208ENST00000493256 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
LYSMD4-208ENST00000493256 KRTAP4-3Q9BYR4 195 aa7.74□□□□□ -1.17
LYSMD4-208ENST00000493256 TNP1P09430 55 aa7.71□□□□□ -1.18
LYSMD4-208ENST00000493256 AHNAK2Q8IVF2 5795 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms