RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 DNAH11Q96DT5 4516 aa2.47□□□□□ -2.01
FN1-224ENST00000492816 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
FN1-224ENST00000492816 DNAH10Q8IVF4 4471 aa2.46□□□□□ -2.02
FN1-224ENST00000492816 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
FN1-224ENST00000492816 VPS13DQ5THJ4 4388 aa2.45□□□□□ -2.02
FN1-224ENST00000492816 DNAH6Q9C0G6 4158 aa2.45□□□□□ -2.02
FN1-224ENST00000492816 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
FN1-224ENST00000492816 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
FN1-224ENST00000492816 HECTD4Q9Y4D8 3996 aa2.44□□□□□ -2.02
FN1-224ENST00000492816 FBN1P35555 2871 aaKnown RBP2.42□□□□□ -2.02
FN1-224ENST00000492816 MT1HL1P0DM35 61 aa2.42□□□□□ -2.02
FN1-224ENST00000492816 HYDINQ4G0P3 5121 aa2.42□□□□□ -2.02
FN1-224ENST00000492816 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
FN1-224ENST00000492816 SRRM2Q9UQ35 2752 aaKnown RBP2.41□□□□□ -2.02
FN1-224ENST00000492816 PKD1P98161 4303 aa2.41□□□□□ -2.02
FN1-224ENST00000492816 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
FN1-224ENST00000492816 MEGF8Q7Z7M0 2845 aa2.4□□□□□ -2.03
FN1-224ENST00000492816 HUWE1Q7Z6Z7 4374 aaKnown RBP2.4□□□□□ -2.03
FN1-224ENST00000492816 RYR2Q92736 4967 aa2.39□□□□□ -2.03
FN1-224ENST00000492816 DNAH5Q8TE73 4624 aa2.39□□□□□ -2.03
FN1-224ENST00000492816 KRTAP23-1A1A580 65 aa2.38□□□□□ -2.03
FN1-224ENST00000492816 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
FN1-224ENST00000492816 KRTAP12-3P60328 96 aa2.37□□□□□ -2.03
FN1-224ENST00000492816 KRTAP4-5Q9BYR2 181 aa2.37□□□□□ -2.03
FN1-224ENST00000492816 INE1O15225 51 aa2.35□□□□□ -2.03
FN1-224ENST00000492816 SACSQ9NZJ4 4579 aa2.35□□□□□ -2.03
FN1-224ENST00000492816 TGP01266 2768 aa2.35□□□□□ -2.03
FN1-224ENST00000492816 FRAS1Q86XX4 4008 aa2.35□□□□□ -2.03
FN1-224ENST00000492816 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
FN1-224ENST00000492816 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.03
FN1-224ENST00000492816 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.04
FN1-224ENST00000492816 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
FN1-224ENST00000492816 KRTAP10-5P60370 271 aa2.32□□□□□ -2.04
FN1-224ENST00000492816 PKHD1P08F94 4074 aa2.31□□□□□ -2.04
FN1-224ENST00000492816 SPRR2EP22531 72 aa2.31□□□□□ -2.04
FN1-224ENST00000492816 SPRR2BP35325 72 aa2.31□□□□□ -2.04
FN1-224ENST00000492816 SPRR2AP35326 72 aa2.31□□□□□ -2.04
FN1-224ENST00000492816 ALMS1Q8TCU4 4167 aa2.31□□□□□ -2.04
FN1-224ENST00000492816 RYR3Q15413 4870 aa2.3□□□□□ -2.04
FN1-224ENST00000492816 FAT3Q8TDW7 4589 aa2.27□□□□□ -2.05
FN1-224ENST00000492816 RYR1P21817 5038 aa2.27□□□□□ -2.05
FN1-224ENST00000492816 KMT2CQ8NEZ4 4911 aaKnown RBP2.26□□□□□ -2.05
FN1-224ENST00000492816 APOBP04114 4563 aaKnown RBP2.26□□□□□ -2.05
FN1-224ENST00000492816 SPRR2DP22532 72 aa2.26□□□□□ -2.05
FN1-224ENST00000492816 KRTAP10-4P60372 401 aaPredicted RBP2.26□□□□□ -2.05
FN1-224ENST00000492816 VPS13BQ7Z7G8 4022 aa2.24□□□□□ -2.05
FN1-224ENST00000492816 LCE3AQ5TA76 89 aa2.23□□□□□ -2.05
FN1-224ENST00000492816 KRTAP3-1Q9BYR8 98 aa2.23□□□□□ -2.05
FN1-224ENST00000492816 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
FN1-224ENST00000492816 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
FN1-224ENST00000492816 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
FN1-224ENST00000492816 MT1HP80294 61 aa2.21□□□□□ -2.06
FN1-224ENST00000492816 LCE2BO14633 110 aa2.2□□□□□ -2.06
FN1-224ENST00000492816 HSPG2P98160 4391 aa2.2□□□□□ -2.06
FN1-224ENST00000492816 TNXBP22105 4242 aa2.19□□□□□ -2.06
FN1-224ENST00000492816 ABCA13Q86UQ4 5058 aa2.19□□□□□ -2.06
FN1-224ENST00000492816 EPPK1P58107 5090 aaKnown RBP2.17□□□□□ -2.06
FN1-224ENST00000492816 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
FN1-224ENST00000492816 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
FN1-224ENST00000492816 KRTAP3-3Q9BYR6 98 aa2.13□□□□□ -2.07
FN1-224ENST00000492816 KRTAP3-2Q9BYR7 98 aa2.13□□□□□ -2.07
FN1-224ENST00000492816 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
FN1-224ENST00000492816 FAT1Q14517 4588 aa2.13□□□□□ -2.07
FN1-224ENST00000492816 BIRC6Q9NR09 4857 aa2.13□□□□□ -2.07
FN1-224ENST00000492816 LCE2CQ5TA81 110 aa2.12□□□□□ -2.07
FN1-224ENST00000492816 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
FN1-224ENST00000492816 MT2AP02795 61 aa2.11□□□□□ -2.07
FN1-224ENST00000492816 MYCBP2O75592 4640 aa2.09□□□□□ -2.07
FN1-224ENST00000492816 LCE2DQ5TA82 110 aaPredicted RBP2.08□□□□□ -2.08
FN1-224ENST00000492816 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
FN1-224ENST00000492816 HERC2O95714 4834 aa2.08□□□□□ -2.08
FN1-224ENST00000492816 HMCN2Q8NDA2 5059 aa2.06□□□□□ -2.08
FN1-224ENST00000492816 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
FN1-224ENST00000492816 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
FN1-224ENST00000492816 MT1FP04733 61 aa2.02□□□□□ -2.09
FN1-224ENST00000492816 KRTAP20-1Q3LI63 56 aa2.01□□□□□ -2.09
FN1-224ENST00000492816 LCE3CQ5T5A8 94 aa2□□□□□ -2.09
FN1-224ENST00000492816 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
FN1-224ENST00000492816 KRTAP17-1Q9BYP8 105 aa2□□□□□ -2.09
FN1-224ENST00000492816 KRTAP19-1Q8IUB9 90 aa1.99□□□□□ -2.09
FN1-224ENST00000492816 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
FN1-224ENST00000492816 UBR4Q5T4S7 5183 aa1.97□□□□□ -2.09
FN1-224ENST00000492816 LCE3BQ5TA77 95 aa1.96□□□□□ -2.1
FN1-224ENST00000492816 MT1GP13640 62 aa1.96□□□□□ -2.1
FN1-224ENST00000492816 HERC1Q15751 4861 aa1.95□□□□□ -2.1
FN1-224ENST00000492816 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
FN1-224ENST00000492816 LPAP08519 4548 aa1.94□□□□□ -2.1
FN1-224ENST00000492816 MT4P47944 62 aa1.93□□□□□ -2.1
FN1-224ENST00000492816 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
FN1-224ENST00000492816 LRP2P98164 4655 aa1.92□□□□□ -2.1
FN1-224ENST00000492816 RNF213Q63HN8 5207 aa1.91□□□□□ -2.1
FN1-224ENST00000492816 KRTAP19-8Q3LI54 63 aa1.9□□□□□ -2.11
FN1-224ENST00000492816 FLGP20930 4061 aaPredicted RBP1.89□□□□□ -2.11
FN1-224ENST00000492816 MUC2Q02817 5179 aa1.88□□□□□ -2.11
FN1-224ENST00000492816 KRTAP9-7A8MTY7 169 aa1.88□□□□□ -2.11
FN1-224ENST00000492816 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
FN1-224ENST00000492816 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
FN1-224ENST00000492816 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
FN1-224ENST00000492816 MT3P25713 68 aa1.84□□□□□ -2.11
FN1-224ENST00000492816 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms