RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 RYR3Q15413 4870 aa3.11□□□□□ -1.91
UBP1-212ENST00000492136 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
UBP1-212ENST00000492136 ALMS1Q8TCU4 4167 aa3.05□□□□□ -1.92
UBP1-212ENST00000492136 MEGF8Q7Z7M0 2845 aa3.05□□□□□ -1.92
UBP1-212ENST00000492136 OTOGQ6ZRI0 2925 aa3.05□□□□□ -1.92
UBP1-212ENST00000492136 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
UBP1-212ENST00000492136 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
UBP1-212ENST00000492136 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
UBP1-212ENST00000492136 KRTAP4-5Q9BYR2 181 aa3.03□□□□□ -1.92
UBP1-212ENST00000492136 CMYA5Q8N3K9 4069 aa3.02□□□□□ -1.93
UBP1-212ENST00000492136 COL7A1Q02388 2944 aa3.02□□□□□ -1.93
UBP1-212ENST00000492136 SPRR2EP22531 72 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 SPRR2BP35325 72 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 SPRR2AP35326 72 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 FBN3Q75N90 2809 aa2.98□□□□□ -1.93
UBP1-212ENST00000492136 HUWE1Q7Z6Z7 4374 aaKnown RBP2.98□□□□□ -1.93
UBP1-212ENST00000492136 ANK3Q12955 4377 aaKnown RBP2.98□□□□□ -1.93
UBP1-212ENST00000492136 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
UBP1-212ENST00000492136 ZNF469Q96JG9 3925 aaPredicted RBP2.97□□□□□ -1.93
UBP1-212ENST00000492136 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
UBP1-212ENST00000492136 HERC2O95714 4834 aa2.96□□□□□ -1.94
UBP1-212ENST00000492136 KRTAP3-3Q9BYR6 98 aa2.91□□□□□ -1.94
UBP1-212ENST00000492136 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
UBP1-212ENST00000492136 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
UBP1-212ENST00000492136 DNAH3Q8TD57 4116 aa2.9□□□□□ -1.94
UBP1-212ENST00000492136 KRTAP3-2Q9BYR7 98 aa2.89□□□□□ -1.95
UBP1-212ENST00000492136 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
UBP1-212ENST00000492136 SPRR2DP22532 72 aa2.88□□□□□ -1.95
UBP1-212ENST00000492136 ANK2Q01484 3957 aa2.87□□□□□ -1.95
UBP1-212ENST00000492136 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
UBP1-212ENST00000492136 DNAH2Q9P225 4427 aa2.87□□□□□ -1.95
UBP1-212ENST00000492136 LYSTQ99698 3801 aa2.86□□□□□ -1.95
UBP1-212ENST00000492136 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
UBP1-212ENST00000492136 KMT2AQ03164 3969 aa2.82□□□□□ -1.96
UBP1-212ENST00000492136 KRTAP10-4P60372 401 aaPredicted RBP2.8□□□□□ -1.96
UBP1-212ENST00000492136 MT1HL1P0DM35 61 aa2.79□□□□□ -1.96
UBP1-212ENST00000492136 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
UBP1-212ENST00000492136 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
UBP1-212ENST00000492136 DNAH6Q9C0G6 4158 aa2.77□□□□□ -1.97
UBP1-212ENST00000492136 PRKDCP78527 4128 aaKnown RBP2.77□□□□□ -1.97
UBP1-212ENST00000492136 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
UBP1-212ENST00000492136 DNAH1Q9P2D7 4330 aa2.76□□□□□ -1.97
UBP1-212ENST00000492136 MT4P47944 62 aa2.74□□□□□ -1.97
UBP1-212ENST00000492136 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
UBP1-212ENST00000492136 LCE2BO14633 110 aa2.71□□□□□ -1.98
UBP1-212ENST00000492136 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
UBP1-212ENST00000492136 DNAH10Q8IVF4 4471 aa2.7□□□□□ -1.98
UBP1-212ENST00000492136 LCE2CQ5TA81 110 aa2.69□□□□□ -1.98
UBP1-212ENST00000492136 DNAH8Q96JB1 4490 aa2.68□□□□□ -1.98
UBP1-212ENST00000492136 HERC1Q15751 4861 aa2.67□□□□□ -1.98
UBP1-212ENST00000492136 LCE2DQ5TA82 110 aaPredicted RBP2.67□□□□□ -1.98
UBP1-212ENST00000492136 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
UBP1-212ENST00000492136 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
UBP1-212ENST00000492136 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
UBP1-212ENST00000492136 DNAH9Q9NYC9 4486 aa2.61□□□□□ -1.99
UBP1-212ENST00000492136 FAT2Q9NYQ8 4349 aa2.61□□□□□ -1.99
UBP1-212ENST00000492136 KRTAP17-1Q9BYP8 105 aa2.6□□□□□ -1.99
UBP1-212ENST00000492136 VPS13DQ5THJ4 4388 aa2.6□□□□□ -1.99
UBP1-212ENST00000492136 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
UBP1-212ENST00000492136 LCE1BQ5T7P3 118 aa2.59□□□□□ -2
UBP1-212ENST00000492136 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -2
UBP1-212ENST00000492136 MT1HP80294 61 aa2.58□□□□□ -2
UBP1-212ENST00000492136 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
UBP1-212ENST00000492136 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
UBP1-212ENST00000492136 MT1GP13640 62 aa2.56□□□□□ -2
UBP1-212ENST00000492136 STARD9Q9P2P6 4700 aa2.55□□□□□ -2
UBP1-212ENST00000492136 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
UBP1-212ENST00000492136 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
UBP1-212ENST00000492136 USH2AO75445 5202 aa2.54□□□□□ -2
UBP1-212ENST00000492136 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
UBP1-212ENST00000492136 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
UBP1-212ENST00000492136 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
UBP1-212ENST00000492136 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
UBP1-212ENST00000492136 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
UBP1-212ENST00000492136 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
UBP1-212ENST00000492136 FAT1Q14517 4588 aa2.5□□□□□ -2.01
UBP1-212ENST00000492136 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
UBP1-212ENST00000492136 DNAH17Q9UFH2 4485 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 MT2AP02795 61 aa2.47□□□□□ -2.01
UBP1-212ENST00000492136 PKD1P98161 4303 aa2.45□□□□□ -2.02
UBP1-212ENST00000492136 MT1FP04733 61 aa2.44□□□□□ -2.02
UBP1-212ENST00000492136 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
UBP1-212ENST00000492136 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.02
UBP1-212ENST00000492136 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
UBP1-212ENST00000492136 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
UBP1-212ENST00000492136 MUC2Q02817 5179 aa2.38□□□□□ -2.03
UBP1-212ENST00000492136 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
UBP1-212ENST00000492136 TNXBP22105 4242 aa2.36□□□□□ -2.03
UBP1-212ENST00000492136 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
UBP1-212ENST00000492136 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
UBP1-212ENST00000492136 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.03
UBP1-212ENST00000492136 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
UBP1-212ENST00000492136 LCE2AQ5TA79 106 aaPredicted RBP2.32□□□□□ -2.04
UBP1-212ENST00000492136 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms