RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 LCA10Q71F78 164 aa4.2□□□□□ -1.74
COL6A4P1-203ENST00000491915 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
COL6A4P1-203ENST00000491915 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
COL6A4P1-203ENST00000491915 UBL5Q9BZL1 73 aa4.18□□□□□ -1.74
COL6A4P1-203ENST00000491915 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
COL6A4P1-203ENST00000491915 CXCL6P80162 114 aa4.17□□□□□ -1.74
COL6A4P1-203ENST00000491915 SERP1Q9Y6X1 66 aa4.17□□□□□ -1.74
COL6A4P1-203ENST00000491915 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
COL6A4P1-203ENST00000491915 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
COL6A4P1-203ENST00000491915 ETDBQ3ZM63 59 aa4.15□□□□□ -1.75
COL6A4P1-203ENST00000491915 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
COL6A4P1-203ENST00000491915 COX7CP15954 63 aa4.11□□□□□ -1.75
COL6A4P1-203ENST00000491915 C1orf64Q8NEQ6 169 aa4.1□□□□□ -1.75
COL6A4P1-203ENST00000491915 TP53AIP1Q9HCN2 124 aa4.08□□□□□ -1.76
COL6A4P1-203ENST00000491915 LINC01554Q52M75 96 aa4.07□□□□□ -1.76
COL6A4P1-203ENST00000491915 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
COL6A4P1-203ENST00000491915 S4R3F8 94 aa4.06□□□□□ -1.76
COL6A4P1-203ENST00000491915 A0A087WVE0 104 aa4.05□□□□□ -1.76
COL6A4P1-203ENST00000491915 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
COL6A4P1-203ENST00000491915 ATOX1O00244 68 aa4.03□□□□□ -1.76
COL6A4P1-203ENST00000491915 ATP5EP56381 51 aaPredicted RBP4.03□□□□□ -1.76
COL6A4P1-203ENST00000491915 MT1BP07438 61 aa4.02□□□□□ -1.77
COL6A4P1-203ENST00000491915 ACYP1P07311 99 aa4.01□□□□□ -1.77
COL6A4P1-203ENST00000491915 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
COL6A4P1-203ENST00000491915 SPRR2GQ9BYE4 73 aa4□□□□□ -1.77
COL6A4P1-203ENST00000491915 OCR1Q9BZK8 76 aa4□□□□□ -1.77
COL6A4P1-203ENST00000491915 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
COL6A4P1-203ENST00000491915 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
COL6A4P1-203ENST00000491915 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
COL6A4P1-203ENST00000491915 HIST1H4AP62805 103 aaKnown RBP3.98□□□□□ -1.77
COL6A4P1-203ENST00000491915 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
COL6A4P1-203ENST00000491915 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
COL6A4P1-203ENST00000491915 H0Y9P7 68 aa3.95□□□□□ -1.78
COL6A4P1-203ENST00000491915 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
COL6A4P1-203ENST00000491915 ATP5EP2Q5VTU8 51 aa3.95□□□□□ -1.78
COL6A4P1-203ENST00000491915 Q5VV11 94 aa3.95□□□□□ -1.78
COL6A4P1-203ENST00000491915 SERP2Q8N6R1 65 aa3.95□□□□□ -1.78
COL6A4P1-203ENST00000491915 LINC00643Q86TS7 51 aa3.94□□□□□ -1.78
COL6A4P1-203ENST00000491915 A6NN06 94 aa3.92□□□□□ -1.78
COL6A4P1-203ENST00000491915 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
COL6A4P1-203ENST00000491915 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
COL6A4P1-203ENST00000491915 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
COL6A4P1-203ENST00000491915 NDUFC1O43677 76 aa3.89□□□□□ -1.79
COL6A4P1-203ENST00000491915 K7ERS5 55 aa3.88□□□□□ -1.79
COL6A4P1-203ENST00000491915 Q1T7F1 81 aa3.87□□□□□ -1.79
COL6A4P1-203ENST00000491915 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
COL6A4P1-203ENST00000491915 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
COL6A4P1-203ENST00000491915 H0YAA0 97 aa3.85□□□□□ -1.79
COL6A4P1-203ENST00000491915 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
COL6A4P1-203ENST00000491915 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
COL6A4P1-203ENST00000491915 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
COL6A4P1-203ENST00000491915 A6NED7 52 aa3.82□□□□□ -1.8
COL6A4P1-203ENST00000491915 H7BZZ5 65 aa3.79□□□□□ -1.8
COL6A4P1-203ENST00000491915 P0C880 135 aa3.79□□□□□ -1.8
COL6A4P1-203ENST00000491915 H3BPC8 53 aa3.77□□□□□ -1.81
COL6A4P1-203ENST00000491915 MT1XP80297 61 aa3.76□□□□□ -1.81
COL6A4P1-203ENST00000491915 SPTSSBQ8NFR3 76 aa3.76□□□□□ -1.81
COL6A4P1-203ENST00000491915 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
COL6A4P1-203ENST00000491915 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
COL6A4P1-203ENST00000491915 ROMO1P60602 79 aa3.73□□□□□ -1.81
COL6A4P1-203ENST00000491915 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
COL6A4P1-203ENST00000491915 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
COL6A4P1-203ENST00000491915 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
COL6A4P1-203ENST00000491915 TRAV7A0A075B6U4 112 aa3.7□□□□□ -1.82
COL6A4P1-203ENST00000491915 C20orf197Q8N268 126 aa3.7□□□□□ -1.82
COL6A4P1-203ENST00000491915 R4GN34 69 aa3.7□□□□□ -1.82
COL6A4P1-203ENST00000491915 NEBP20929 6669 aa3.69□□□□□ -1.82
COL6A4P1-203ENST00000491915 M0QZ58 72 aa3.69□□□□□ -1.82
COL6A4P1-203ENST00000491915 ACYP2P14621 99 aa3.67□□□□□ -1.82
COL6A4P1-203ENST00000491915 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
COL6A4P1-203ENST00000491915 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.83
COL6A4P1-203ENST00000491915 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
COL6A4P1-203ENST00000491915 KMT2DO14686 5537 aa3.65□□□□□ -1.83
COL6A4P1-203ENST00000491915 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
COL6A4P1-203ENST00000491915 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
COL6A4P1-203ENST00000491915 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
COL6A4P1-203ENST00000491915 SNURFQ9Y675 71 aa3.63□□□□□ -1.83
COL6A4P1-203ENST00000491915 KRTAP12-2P59991 146 aa3.62□□□□□ -1.83
COL6A4P1-203ENST00000491915 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
COL6A4P1-203ENST00000491915 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
COL6A4P1-203ENST00000491915 KRTAP10-7P60409 375 aaPredicted RBP3.59□□□□□ -1.83
COL6A4P1-203ENST00000491915 SPRR2EP22531 72 aa3.58□□□□□ -1.84
COL6A4P1-203ENST00000491915 SPRR2BP35325 72 aa3.58□□□□□ -1.84
COL6A4P1-203ENST00000491915 SPRR2AP35326 72 aa3.58□□□□□ -1.84
COL6A4P1-203ENST00000491915 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
COL6A4P1-203ENST00000491915 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
COL6A4P1-203ENST00000491915 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
COL6A4P1-203ENST00000491915 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
COL6A4P1-203ENST00000491915 A8MU10 97 aa3.55□□□□□ -1.84
COL6A4P1-203ENST00000491915 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
COL6A4P1-203ENST00000491915 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
COL6A4P1-203ENST00000491915 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
COL6A4P1-203ENST00000491915 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
COL6A4P1-203ENST00000491915 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
COL6A4P1-203ENST00000491915 A0A1B0GU33 70 aa3.47□□□□□ -1.85
COL6A4P1-203ENST00000491915 SPRR2DP22532 72 aa3.46□□□□□ -1.86
COL6A4P1-203ENST00000491915 COA5Q86WW8 74 aa3.46□□□□□ -1.86
COL6A4P1-203ENST00000491915 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
COL6A4P1-203ENST00000491915 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
COL6A4P1-203ENST00000491915 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms