RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
LSM2-213ENST00000491421 BPY2O14599 106 aa3.97□□□□□ -1.77
LSM2-213ENST00000491421 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
LSM2-213ENST00000491421 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
LSM2-213ENST00000491421 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
LSM2-213ENST00000491421 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
LSM2-213ENST00000491421 TMEM258P61165 79 aa3.95□□□□□ -1.78
LSM2-213ENST00000491421 H1FX-AS1Q4G0G2 97 aa3.95□□□□□ -1.78
LSM2-213ENST00000491421 K7ERS5 55 aa3.94□□□□□ -1.78
LSM2-213ENST00000491421 Q8N9L7 120 aa3.94□□□□□ -1.78
LSM2-213ENST00000491421 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
LSM2-213ENST00000491421 CASC2Q6XLA1 102 aa3.93□□□□□ -1.78
LSM2-213ENST00000491421 C7orf65Q6ZTY9 151 aa3.93□□□□□ -1.78
LSM2-213ENST00000491421 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
LSM2-213ENST00000491421 SPCS1Q9Y6A9 102 aa3.93□□□□□ -1.78
LSM2-213ENST00000491421 HIST1H4AP62805 103 aaKnown RBP3.92□□□□□ -1.78
LSM2-213ENST00000491421 Q5W150 140 aa3.92□□□□□ -1.78
LSM2-213ENST00000491421 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
LSM2-213ENST00000491421 HCG22E2RYF7 251 aa3.91□□□□□ -1.78
LSM2-213ENST00000491421 UQCRQO14949 82 aa3.91□□□□□ -1.78
LSM2-213ENST00000491421 LINC00846Q9NV44 126 aa3.91□□□□□ -1.78
LSM2-213ENST00000491421 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
LSM2-213ENST00000491421 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
LSM2-213ENST00000491421 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
LSM2-213ENST00000491421 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
LSM2-213ENST00000491421 SYNE2Q8WXH0 6885 aaKnown RBP3.87□□□□□ -1.79
LSM2-213ENST00000491421 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
LSM2-213ENST00000491421 PRO0461Q9UI25 63 aa3.86□□□□□ -1.79
LSM2-213ENST00000491421 K7EP34 96 aa3.85□□□□□ -1.79
LSM2-213ENST00000491421 A6NED7 52 aa3.84□□□□□ -1.79
LSM2-213ENST00000491421 KRTAP19-4Q3LI73 84 aa3.83□□□□□ -1.8
LSM2-213ENST00000491421 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
LSM2-213ENST00000491421 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
LSM2-213ENST00000491421 C1orf64Q8NEQ6 169 aa3.8□□□□□ -1.8
LSM2-213ENST00000491421 TP53AIP1Q9HCN2 124 aa3.8□□□□□ -1.8
LSM2-213ENST00000491421 S4R3F8 94 aa3.8□□□□□ -1.8
LSM2-213ENST00000491421 CSAG1Q6PB30 78 aa3.78□□□□□ -1.8
LSM2-213ENST00000491421 F8W1H4 67 aa3.77□□□□□ -1.81
LSM2-213ENST00000491421 ETDBQ3ZM63 59 aa3.77□□□□□ -1.81
LSM2-213ENST00000491421 ADM2Q7Z4H4 148 aa3.76□□□□□ -1.81
LSM2-213ENST00000491421 MT-ATP8P03928 68 aa3.74□□□□□ -1.81
LSM2-213ENST00000491421 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
LSM2-213ENST00000491421 Q5VV11 94 aa3.73□□□□□ -1.81
LSM2-213ENST00000491421 CYP4F30PQ9H0H9 118 aa3.73□□□□□ -1.81
LSM2-213ENST00000491421 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
LSM2-213ENST00000491421 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
LSM2-213ENST00000491421 SPRR2GQ9BYE4 73 aa3.72□□□□□ -1.81
LSM2-213ENST00000491421 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
LSM2-213ENST00000491421 A6NN06 94 aa3.71□□□□□ -1.82
LSM2-213ENST00000491421 MT1BP07438 61 aa3.71□□□□□ -1.82
LSM2-213ENST00000491421 COX7CP15954 63 aa3.71□□□□□ -1.82
LSM2-213ENST00000491421 LOC101927531A0A1B0GV80 90 aa3.7□□□□□ -1.82
LSM2-213ENST00000491421 KLKP1Q107X0 134 aa3.7□□□□□ -1.82
LSM2-213ENST00000491421 KRTAP19-8Q3LI54 63 aa3.7□□□□□ -1.82
LSM2-213ENST00000491421 ACYP1P07311 99 aa3.69□□□□□ -1.82
LSM2-213ENST00000491421 ATP5EP56381 51 aaPredicted RBP3.68□□□□□ -1.82
LSM2-213ENST00000491421 ATP5EP2Q5VTU8 51 aa3.68□□□□□ -1.82
LSM2-213ENST00000491421 A0A087WVE0 104 aa3.67□□□□□ -1.82
LSM2-213ENST00000491421 H3BPC8 53 aa3.66□□□□□ -1.82
LSM2-213ENST00000491421 NEBP20929 6669 aa3.65□□□□□ -1.83
LSM2-213ENST00000491421 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.83
LSM2-213ENST00000491421 H0Y9P7 68 aa3.65□□□□□ -1.83
LSM2-213ENST00000491421 ATOX1O00244 68 aa3.65□□□□□ -1.83
LSM2-213ENST00000491421 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
LSM2-213ENST00000491421 CRIPTQ9P021 101 aa3.65□□□□□ -1.83
LSM2-213ENST00000491421 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
LSM2-213ENST00000491421 NDUFC1O43677 76 aa3.63□□□□□ -1.83
LSM2-213ENST00000491421 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
LSM2-213ENST00000491421 H0YAA0 97 aa3.6□□□□□ -1.83
LSM2-213ENST00000491421 LINC00643Q86TS7 51 aa3.6□□□□□ -1.83
LSM2-213ENST00000491421 LINC00208Q96KT6 92 aa3.58□□□□□ -1.84
LSM2-213ENST00000491421 ROMO1P60602 79 aa3.57□□□□□ -1.84
LSM2-213ENST00000491421 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
LSM2-213ENST00000491421 Q1T7F1 81 aa3.54□□□□□ -1.84
LSM2-213ENST00000491421 KMT2DO14686 5537 aa3.54□□□□□ -1.84
LSM2-213ENST00000491421 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
LSM2-213ENST00000491421 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
LSM2-213ENST00000491421 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
LSM2-213ENST00000491421 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
LSM2-213ENST00000491421 A0A1B0GU33 70 aa3.5□□□□□ -1.85
LSM2-213ENST00000491421 PRO2289Q9P1D8 64 aa3.5□□□□□ -1.85
LSM2-213ENST00000491421 C20orf197Q8N268 126 aa3.49□□□□□ -1.85
LSM2-213ENST00000491421 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
LSM2-213ENST00000491421 PLAC4Q8WY50 150 aa3.49□□□□□ -1.85
LSM2-213ENST00000491421 R4GN34 69 aa3.49□□□□□ -1.85
LSM2-213ENST00000491421 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
LSM2-213ENST00000491421 DMAC1Q96GE9 116 aa3.48□□□□□ -1.85
LSM2-213ENST00000491421 P0C880 135 aa3.47□□□□□ -1.85
LSM2-213ENST00000491421 MT1XP80297 61 aa3.47□□□□□ -1.85
LSM2-213ENST00000491421 M0QZ58 72 aa3.46□□□□□ -1.86
LSM2-213ENST00000491421 MIR22HGQ0VDD5 57 aa3.46□□□□□ -1.86
LSM2-213ENST00000491421 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
LSM2-213ENST00000491421 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
LSM2-213ENST00000491421 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
LSM2-213ENST00000491421 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
LSM2-213ENST00000491421 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
LSM2-213ENST00000491421 SPRR2EP22531 72 aa3.4□□□□□ -1.87
LSM2-213ENST00000491421 SPRR2BP35325 72 aa3.4□□□□□ -1.87
LSM2-213ENST00000491421 SPRR2AP35326 72 aa3.4□□□□□ -1.87
LSM2-213ENST00000491421 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms