RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 H0Y9P7 68 aa14.06□□□□□ -0.16
LDB1-204ENST00000490751 KRTAP19-8Q3LI54 63 aa14.05□□□□□ -0.16
LDB1-204ENST00000490751 ATOX1O00244 68 aa14.02□□□□□ -0.17
LDB1-204ENST00000490751 LINC00643Q86TS7 51 aa13.97□□□□□ -0.17
LDB1-204ENST00000490751 A6NN06 94 aa13.96□□□□□ -0.17
LDB1-204ENST00000490751 KRTAP6-3Q3LI67 103 aa13.94□□□□□ -0.18
LDB1-204ENST00000490751 IMUPQ9GZP8 106 aa13.86□□□□□ -0.19
LDB1-204ENST00000490751 NDUFC1O43677 76 aa13.85□□□□□ -0.19
LDB1-204ENST00000490751 CRIPTQ9P021 101 aa13.85□□□□□ -0.19
LDB1-204ENST00000490751 LINC00208Q96KT6 92 aa13.82□□□□□ -0.2
LDB1-204ENST00000490751 A0A1B0GV90 55 aa13.81□□□□□ -0.2
LDB1-204ENST00000490751 A8MUN3 132 aa13.79□□□□□ -0.2
LDB1-204ENST00000490751 KRTAP10-5P60370 271 aa13.77□□□□□ -0.21
LDB1-204ENST00000490751 OCR1Q9BZK8 76 aa13.76□□□□□ -0.21
LDB1-204ENST00000490751 H0YAA0 97 aa13.75□□□□□ -0.21
LDB1-204ENST00000490751 MP68P56378 58 aa13.73□□□□□ -0.21
LDB1-204ENST00000490751 ADM2Q7Z4H4 148 aa13.62□□□□□ -0.23
LDB1-204ENST00000490751 J3QR89 54 aa13.55□□□□□ -0.24
LDB1-204ENST00000490751 H3BPC8 53 aa13.5□□□□□ -0.25
LDB1-204ENST00000490751 SCGB1A1P11684 91 aa13.43□□□□□ -0.26
LDB1-204ENST00000490751 DMAC1Q96GE9 116 aa13.39□□□□□ -0.27
LDB1-204ENST00000490751 NEBP20929 6669 aa13.39□□□□□ -0.27
LDB1-204ENST00000490751 MUC12Q9UKN1 5478 aa13.39□□□□□ -0.27
LDB1-204ENST00000490751 P0C880 135 aa13.3□□□□□ -0.28
LDB1-204ENST00000490751 KRTAP5-9P26371 169 aa13.28□□□□□ -0.28
LDB1-204ENST00000490751 R4GN34 69 aa13.28□□□□□ -0.28
LDB1-204ENST00000490751 C20orf197Q8N268 126 aa13.27□□□□□ -0.29
LDB1-204ENST00000490751 PLAC4Q8WY50 150 aa13.22□□□□□ -0.29
LDB1-204ENST00000490751 PRO2289Q9P1D8 64 aa13.22□□□□□ -0.29
LDB1-204ENST00000490751 MT1XP80297 61 aa13.19□□□□□ -0.3
LDB1-204ENST00000490751 M0QZ58 72 aa13.18□□□□□ -0.3
LDB1-204ENST00000490751 KRTAP3-2Q9BYR7 98 aa13.16□□□□□ -0.3
LDB1-204ENST00000490751 MT-ATP8P03928 68 aa13.11□□□□□ -0.31
LDB1-204ENST00000490751 KMT2DO14686 5537 aa13.11□□□□□ -0.31
LDB1-204ENST00000490751 TRAV7A0A075B6U4 112 aa13.1□□□□□ -0.31
LDB1-204ENST00000490751 ACYP2P14621 99 aa13.04□□□□□ -0.32
LDB1-204ENST00000490751 SMIM20Q8N5G0 67 aa13.03□□□□□ -0.32
LDB1-204ENST00000490751 LINC01554Q52M75 96 aa13□□□□□ -0.33
LDB1-204ENST00000490751 MDN1Q9NU22 5596 aa12.99□□□□□ -0.33
LDB1-204ENST00000490751 K7ERU9 68 aa12.99□□□□□ -0.33
LDB1-204ENST00000490751 KRTAP20-1Q3LI63 56 aa12.96□□□□□ -0.33
LDB1-204ENST00000490751 SPTSSBQ8NFR3 76 aa12.9□□□□□ -0.34
LDB1-204ENST00000490751 SPRR2FQ96RM1 72 aa12.89□□□□□ -0.35
LDB1-204ENST00000490751 KRTAP12-2P59991 146 aa12.88□□□□□ -0.35
LDB1-204ENST00000490751 KRTAP8-1Q8IUC2 63 aa12.82□□□□□ -0.36
LDB1-204ENST00000490751 CHKB-CPT1BH3BT56 60 aa12.81□□□□□ -0.36
LDB1-204ENST00000490751 SNURFQ9Y675 71 aa12.81□□□□□ -0.36
LDB1-204ENST00000490751 SPRR2EP22531 72 aa12.72□□□□□ -0.37
LDB1-204ENST00000490751 SPRR2BP35325 72 aa12.72□□□□□ -0.37
LDB1-204ENST00000490751 SPRR2AP35326 72 aa12.72□□□□□ -0.37
LDB1-204ENST00000490751 KRTAP4-8A0A0G2JLE6 195 aa12.65□□□□□ -0.38
LDB1-204ENST00000490751 KRTAP4-8Q9BYQ9 185 aa12.65□□□□□ -0.38
LDB1-204ENST00000490751 SPANXA2-OT1Q8N9U9 137 aa12.63□□□□□ -0.39
LDB1-204ENST00000490751 KRTAP10-7P60409 375 aaPredicted RBP12.6□□□□□ -0.39
LDB1-204ENST00000490751 KRTAP2-3P0C7H8 128 aa12.59□□□□□ -0.39
LDB1-204ENST00000490751 KRTAP2-4Q9BYR9 128 aa12.59□□□□□ -0.39
LDB1-204ENST00000490751 SERP2Q8N6R1 65 aa12.56□□□□□ -0.4
LDB1-204ENST00000490751 LCE1AQ5T7P2 110 aa12.54□□□□□ -0.4
LDB1-204ENST00000490751 KRTAP10-12P60413 245 aa12.52□□□□□ -0.41
LDB1-204ENST00000490751 KRTAP13-4Q3LI77 160 aa12.4□□□□□ -0.42
LDB1-204ENST00000490751 COA5Q86WW8 74 aa12.31□□□□□ -0.44
LDB1-204ENST00000490751 SPRR2DP22532 72 aa12.3□□□□□ -0.44
LDB1-204ENST00000490751 CAMK2N1Q7Z7J9 78 aa12.21□□□□□ -0.45
LDB1-204ENST00000490751 KRTAP2-2Q9BYT5 123 aa12.19□□□□□ -0.46
LDB1-204ENST00000490751 KRTAP2-1Q9BYU5 128 aa12.19□□□□□ -0.46
LDB1-204ENST00000490751 COX7CP15954 63 aa12.14□□□□□ -0.47
LDB1-204ENST00000490751 SEC61GP60059 68 aa12.11□□□□□ -0.47
LDB1-204ENST00000490751 SERP1Q9Y6X1 66 aa12.1□□□□□ -0.47
LDB1-204ENST00000490751 A0A0D9SG42 100 aa12.02□□□□□ -0.49
LDB1-204ENST00000490751 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
LDB1-204ENST00000490751 H7BZZ5 65 aa11.99□□□□□ -0.49
LDB1-204ENST00000490751 SPATA8Q6RVD6 105 aa11.97□□□□□ -0.49
LDB1-204ENST00000490751 LCE3BQ5TA77 95 aa11.96□□□□□ -0.49
LDB1-204ENST00000490751 A0A1B0GU33 70 aa11.91□□□□□ -0.5
LDB1-204ENST00000490751 SPINT4Q6UDR6 99 aa11.85□□□□□ -0.51
LDB1-204ENST00000490751 KRTAP19-7Q3SYF9 63 aa11.79□□□□□ -0.52
LDB1-204ENST00000490751 KRTAP12-1P59990 96 aa11.76□□□□□ -0.53
LDB1-204ENST00000490751 MT1EP04732 61 aa11.7□□□□□ -0.54
LDB1-204ENST00000490751 A0A1B0GU69 56 aa11.68□□□□□ -0.54
LDB1-204ENST00000490751 ANAPC13Q9BS18 74 aa11.65□□□□□ -0.54
LDB1-204ENST00000490751 LCE5AQ5TCM9 118 aa11.64□□□□□ -0.55
LDB1-204ENST00000490751 KRTAP19-3Q7Z4W3 81 aa11.61□□□□□ -0.55
LDB1-204ENST00000490751 SMIM26A0A096LP01 95 aa11.58□□□□□ -0.56
LDB1-204ENST00000490751 A8MU10 97 aa11.51□□□□□ -0.57
LDB1-204ENST00000490751 KRTAP19-5Q3LI72 72 aa11.48□□□□□ -0.57
LDB1-204ENST00000490751 CCDC179H3BU77 68 aa11.45□□□□□ -0.58
LDB1-204ENST00000490751 DSTQ03001 7570 aaKnown RBP11.44□□□□□ -0.58
LDB1-204ENST00000490751 ATP5EP56381 51 aaPredicted RBP11.33□□□□□ -0.6
LDB1-204ENST00000490751 MT1GP13640 62 aa11.31□□□□□ -0.6
LDB1-204ENST00000490751 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
LDB1-204ENST00000490751 C10orf95Q9H7T3 257 aa11.26□□□□□ -0.61
LDB1-204ENST00000490751 PP632Q6XCG6 107 aa11.23□□□□□ -0.61
LDB1-204ENST00000490751 TNP1P09430 55 aa11.22□□□□□ -0.61
LDB1-204ENST00000490751 LCE3AQ5TA76 89 aa11.2□□□□□ -0.62
LDB1-204ENST00000490751 MT1LQ93083 61 aa11.17□□□□□ -0.62
LDB1-204ENST00000490751 LINC01558Q9Y6Z2 57 aa11.17□□□□□ -0.62
LDB1-204ENST00000490751 KRTAP4-9Q9BYQ8 210 aa11.15□□□□□ -0.62
LDB1-204ENST00000490751 MT1MQ8N339 61 aa11.14□□□□□ -0.63
LDB1-204ENST00000490751 TMEM258P61165 79 aa10.99□□□□□ -0.65
LDB1-204ENST00000490751 UQCR11O14957 56 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms