RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 H0Y9P7 68 aa4.06□□□□□ -1.76
SUPT20H-220ENST00000490716 A8MUN3 132 aa4.05□□□□□ -1.76
SUPT20H-220ENST00000490716 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
SUPT20H-220ENST00000490716 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
SUPT20H-220ENST00000490716 IMUPQ9GZP8 106 aa4.05□□□□□ -1.76
SUPT20H-220ENST00000490716 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
SUPT20H-220ENST00000490716 KRTAP3-2Q9BYR7 98 aa4.04□□□□□ -1.76
SUPT20H-220ENST00000490716 H3BPC8 53 aa4.03□□□□□ -1.76
SUPT20H-220ENST00000490716 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
SUPT20H-220ENST00000490716 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
SUPT20H-220ENST00000490716 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
SUPT20H-220ENST00000490716 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
SUPT20H-220ENST00000490716 MT-ATP8P03928 68 aa3.99□□□□□ -1.77
SUPT20H-220ENST00000490716 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
SUPT20H-220ENST00000490716 Q5VV11 94 aa3.96□□□□□ -1.78
SUPT20H-220ENST00000490716 LINC00208Q96KT6 92 aa3.96□□□□□ -1.78
SUPT20H-220ENST00000490716 MT1XP80297 61 aa3.95□□□□□ -1.78
SUPT20H-220ENST00000490716 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
SUPT20H-220ENST00000490716 J3QR89 54 aa3.93□□□□□ -1.78
SUPT20H-220ENST00000490716 TRAV7A0A075B6U4 112 aa3.91□□□□□ -1.78
SUPT20H-220ENST00000490716 KMT2DO14686 5537 aa3.9□□□□□ -1.79
SUPT20H-220ENST00000490716 P0C880 135 aa3.9□□□□□ -1.79
SUPT20H-220ENST00000490716 MP68P56378 58 aa3.88□□□□□ -1.79
SUPT20H-220ENST00000490716 NDUFC1O43677 76 aa3.88□□□□□ -1.79
SUPT20H-220ENST00000490716 K7ERU9 68 aa3.87□□□□□ -1.79
SUPT20H-220ENST00000490716 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
SUPT20H-220ENST00000490716 SMIM20Q8N5G0 67 aa3.87□□□□□ -1.79
SUPT20H-220ENST00000490716 NEBP20929 6669 aa3.86□□□□□ -1.79
SUPT20H-220ENST00000490716 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
SUPT20H-220ENST00000490716 FAM236AA0A1B0GUQ0 79 aa3.85□□□□□ -1.79
SUPT20H-220ENST00000490716 FAM236BA0A1B0GV22 79 aa3.85□□□□□ -1.79
SUPT20H-220ENST00000490716 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
SUPT20H-220ENST00000490716 A6NN06 94 aa3.83□□□□□ -1.8
SUPT20H-220ENST00000490716 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
SUPT20H-220ENST00000490716 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
SUPT20H-220ENST00000490716 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
SUPT20H-220ENST00000490716 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
SUPT20H-220ENST00000490716 ACYP2P14621 99 aa3.76□□□□□ -1.81
SUPT20H-220ENST00000490716 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
SUPT20H-220ENST00000490716 SCGB1A1P11684 91 aa3.74□□□□□ -1.81
SUPT20H-220ENST00000490716 SNURFQ9Y675 71 aa3.73□□□□□ -1.81
SUPT20H-220ENST00000490716 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
SUPT20H-220ENST00000490716 H7BZZ5 65 aa3.71□□□□□ -1.82
SUPT20H-220ENST00000490716 COX7CP15954 63 aa3.69□□□□□ -1.82
SUPT20H-220ENST00000490716 C20orf197Q8N268 126 aa3.69□□□□□ -1.82
SUPT20H-220ENST00000490716 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
SUPT20H-220ENST00000490716 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
SUPT20H-220ENST00000490716 M0QZ58 72 aa3.67□□□□□ -1.82
SUPT20H-220ENST00000490716 R4GN34 69 aa3.67□□□□□ -1.82
SUPT20H-220ENST00000490716 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
SUPT20H-220ENST00000490716 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.82
SUPT20H-220ENST00000490716 COA5Q86WW8 74 aa3.62□□□□□ -1.83
SUPT20H-220ENST00000490716 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
SUPT20H-220ENST00000490716 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
SUPT20H-220ENST00000490716 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
SUPT20H-220ENST00000490716 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
SUPT20H-220ENST00000490716 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
SUPT20H-220ENST00000490716 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
SUPT20H-220ENST00000490716 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
SUPT20H-220ENST00000490716 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
SUPT20H-220ENST00000490716 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
SUPT20H-220ENST00000490716 CCDC179H3BU77 68 aa3.51□□□□□ -1.85
SUPT20H-220ENST00000490716 CHKB-CPT1BH3BT56 60 aa3.5□□□□□ -1.85
SUPT20H-220ENST00000490716 SPRR2EP22531 72 aa3.5□□□□□ -1.85
SUPT20H-220ENST00000490716 SPRR2BP35325 72 aa3.5□□□□□ -1.85
SUPT20H-220ENST00000490716 SPRR2AP35326 72 aa3.5□□□□□ -1.85
SUPT20H-220ENST00000490716 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
SUPT20H-220ENST00000490716 MT1EP04732 61 aa3.47□□□□□ -1.85
SUPT20H-220ENST00000490716 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
SUPT20H-220ENST00000490716 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
SUPT20H-220ENST00000490716 ANAPC13Q9BS18 74 aa3.44□□□□□ -1.86
SUPT20H-220ENST00000490716 A0A1B0GU33 70 aa3.43□□□□□ -1.86
SUPT20H-220ENST00000490716 ATP5EP56381 51 aaPredicted RBP3.41□□□□□ -1.86
SUPT20H-220ENST00000490716 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
SUPT20H-220ENST00000490716 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
SUPT20H-220ENST00000490716 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
SUPT20H-220ENST00000490716 C10orf95Q9H7T3 257 aa3.39□□□□□ -1.87
SUPT20H-220ENST00000490716 SPRR2DP22532 72 aa3.38□□□□□ -1.87
SUPT20H-220ENST00000490716 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
SUPT20H-220ENST00000490716 A8MU10 97 aa3.35□□□□□ -1.87
SUPT20H-220ENST00000490716 TMEM258P61165 79 aa3.35□□□□□ -1.87
SUPT20H-220ENST00000490716 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
SUPT20H-220ENST00000490716 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
SUPT20H-220ENST00000490716 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
SUPT20H-220ENST00000490716 A0A1B0GU69 56 aa3.32□□□□□ -1.88
SUPT20H-220ENST00000490716 MT1LQ93083 61 aa3.32□□□□□ -1.88
SUPT20H-220ENST00000490716 A0A0D9SG42 100 aa3.29□□□□□ -1.88
SUPT20H-220ENST00000490716 SEC61GP60059 68 aa3.29□□□□□ -1.88
SUPT20H-220ENST00000490716 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
SUPT20H-220ENST00000490716 MT1GP13640 62 aa3.29□□□□□ -1.88
SUPT20H-220ENST00000490716 MT1MQ8N339 61 aa3.28□□□□□ -1.88
SUPT20H-220ENST00000490716 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
SUPT20H-220ENST00000490716 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
SUPT20H-220ENST00000490716 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
SUPT20H-220ENST00000490716 Q1T7F1 81 aa3.24□□□□□ -1.89
SUPT20H-220ENST00000490716 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
SUPT20H-220ENST00000490716 SVIPQ8NHG7 77 aa3.21□□□□□ -1.9
SUPT20H-220ENST00000490716 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SUPT20H-220ENST00000490716 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
SUPT20H-220ENST00000490716 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms