RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 KRTAP13-3Q3SY46 172 aa5.8□□□□□ -1.48
ABCD4-214ENST00000489678 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
ABCD4-214ENST00000489678 KRTAP10-8P60410 259 aa5.78□□□□□ -1.48
ABCD4-214ENST00000489678 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
ABCD4-214ENST00000489678 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
ABCD4-214ENST00000489678 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
ABCD4-214ENST00000489678 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
ABCD4-214ENST00000489678 SPINK1P00995 79 aa5.71□□□□□ -1.5
ABCD4-214ENST00000489678 HRES1P13985 223 aa5.69□□□□□ -1.5
ABCD4-214ENST00000489678 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
ABCD4-214ENST00000489678 ROMO1P60602 79 aa5.67□□□□□ -1.5
ABCD4-214ENST00000489678 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
ABCD4-214ENST00000489678 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
ABCD4-214ENST00000489678 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
ABCD4-214ENST00000489678 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
ABCD4-214ENST00000489678 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
ABCD4-214ENST00000489678 UQCR11O14957 56 aa5.58□□□□□ -1.52
ABCD4-214ENST00000489678 ACYP2P14621 99 aa5.57□□□□□ -1.52
ABCD4-214ENST00000489678 KRTAP25-1Q3LHN0 102 aa5.56□□□□□ -1.52
ABCD4-214ENST00000489678 A0A1B0GU69 56 aa5.55□□□□□ -1.52
ABCD4-214ENST00000489678 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
ABCD4-214ENST00000489678 XP32Q5T750 250 aa5.53□□□□□ -1.52
ABCD4-214ENST00000489678 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
ABCD4-214ENST00000489678 KRTAP3-2Q9BYR7 98 aa5.52□□□□□ -1.53
ABCD4-214ENST00000489678 A8MUU9 505 aa5.48□□□□□ -1.53
ABCD4-214ENST00000489678 C20orf166-AS1Q96NR2 134 aa5.48□□□□□ -1.53
ABCD4-214ENST00000489678 P0C880 135 aa5.48□□□□□ -1.53
ABCD4-214ENST00000489678 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
ABCD4-214ENST00000489678 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.55
ABCD4-214ENST00000489678 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
ABCD4-214ENST00000489678 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
ABCD4-214ENST00000489678 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
ABCD4-214ENST00000489678 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
ABCD4-214ENST00000489678 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
ABCD4-214ENST00000489678 COX6B2Q6YFQ2 88 aa5.26□□□□□ -1.57
ABCD4-214ENST00000489678 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
ABCD4-214ENST00000489678 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
ABCD4-214ENST00000489678 H0YAA0 97 aa5.22□□□□□ -1.57
ABCD4-214ENST00000489678 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
ABCD4-214ENST00000489678 USH2AO75445 5202 aa5.17□□□□□ -1.58
ABCD4-214ENST00000489678 M0R2T5 61 aa5.14□□□□□ -1.59
ABCD4-214ENST00000489678 A0A1B0GU33 70 aa5.14□□□□□ -1.59
ABCD4-214ENST00000489678 K7ERS5 55 aa5.13□□□□□ -1.59
ABCD4-214ENST00000489678 H1FX-AS1Q4G0G2 97 aa5.13□□□□□ -1.59
ABCD4-214ENST00000489678 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
ABCD4-214ENST00000489678 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
ABCD4-214ENST00000489678 KRTAP10-6P60371 365 aaPredicted RBP5.08□□□□□ -1.6
ABCD4-214ENST00000489678 S4R3F8 94 aa5.08□□□□□ -1.6
ABCD4-214ENST00000489678 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
ABCD4-214ENST00000489678 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
ABCD4-214ENST00000489678 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
ABCD4-214ENST00000489678 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
ABCD4-214ENST00000489678 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
ABCD4-214ENST00000489678 A0A0D9SG42 100 aa4.98□□□□□ -1.61
ABCD4-214ENST00000489678 MT1HP80294 61 aa4.97□□□□□ -1.61
ABCD4-214ENST00000489678 LCE2AQ5TA79 106 aaPredicted RBP4.93□□□□□ -1.62
ABCD4-214ENST00000489678 LORP23490 312 aaPredicted RBP4.9□□□□□ -1.63
ABCD4-214ENST00000489678 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
ABCD4-214ENST00000489678 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
ABCD4-214ENST00000489678 KRTAP10-10P60014 251 aa4.82□□□□□ -1.64
ABCD4-214ENST00000489678 LCE2BO14633 110 aa4.81□□□□□ -1.64
ABCD4-214ENST00000489678 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
ABCD4-214ENST00000489678 MT1FP04733 61 aa4.78□□□□□ -1.64
ABCD4-214ENST00000489678 M0QZ58 72 aa4.78□□□□□ -1.64
ABCD4-214ENST00000489678 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
ABCD4-214ENST00000489678 MT2AP02795 61 aa4.75□□□□□ -1.65
ABCD4-214ENST00000489678 R4GN34 69 aa4.75□□□□□ -1.65
ABCD4-214ENST00000489678 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
ABCD4-214ENST00000489678 KMT2DO14686 5537 aa4.71□□□□□ -1.66
ABCD4-214ENST00000489678 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
ABCD4-214ENST00000489678 PLAC4Q8WY50 150 aa4.65□□□□□ -1.67
ABCD4-214ENST00000489678 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
ABCD4-214ENST00000489678 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
ABCD4-214ENST00000489678 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
ABCD4-214ENST00000489678 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
ABCD4-214ENST00000489678 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.69
ABCD4-214ENST00000489678 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
ABCD4-214ENST00000489678 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
ABCD4-214ENST00000489678 MT1BP07438 61 aa4.4□□□□□ -1.7
ABCD4-214ENST00000489678 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
ABCD4-214ENST00000489678 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
ABCD4-214ENST00000489678 INE1O15225 51 aa4.37□□□□□ -1.71
ABCD4-214ENST00000489678 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
ABCD4-214ENST00000489678 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
ABCD4-214ENST00000489678 TNP1P09430 55 aa4.25□□□□□ -1.73
ABCD4-214ENST00000489678 MT1XP80297 61 aa4.24□□□□□ -1.73
ABCD4-214ENST00000489678 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
ABCD4-214ENST00000489678 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
ABCD4-214ENST00000489678 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
ABCD4-214ENST00000489678 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
ABCD4-214ENST00000489678 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
ABCD4-214ENST00000489678 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
ABCD4-214ENST00000489678 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
ABCD4-214ENST00000489678 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
ABCD4-214ENST00000489678 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
ABCD4-214ENST00000489678 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
ABCD4-214ENST00000489678 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
ABCD4-214ENST00000489678 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
ABCD4-214ENST00000489678 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
ABCD4-214ENST00000489678 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms